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These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 261 cluster # 261       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_261#0 length = 449 sequences # 1  
 consensus_261#1 length = 188 sequences # 1  
consensusID : consensus_261#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 449
fasta sequence 
                              [CTCCCAGTTTGATCAGAGAAACACGGCAGCTGGGGTGCTGGTCTGGAAATGCACACCAAGCCCTGGGTCAGAGCCAGAGCCCGTCGTGACTACTGGGAGAACCTGAAGCCAGCCTCTGGCCGGCCCCTGTGCGCCTCCCTGTCTGCTCCCGATTGCTGGGGTGTCACAAAAGGTGACACTGCCCTCATGCAGCAGAAAGAAGCAACCACAAAGGACCAACTGAAGCAGCTGTTCGACCGCAAAAGCAACTAAGACAACTCTTCTCCTTCAGACCATGCAACATAGTCGAATCAAGCAAAAAGTGTGACCTGGCAGTGCACGGTGGTTTGCACTGTGTCTGTCCAGCGCTGCTGCTTACACCCATGAAATCTCCTCTTGAGACTGTGATTTGAACGAAGCCACAGTGAGTTCCCCACTCACAGTAGGTGTAGCACCGTGTCAAGATTGGC]

[+] EMBL CA330160             [CTCCCAGTTTGATCAGAGAAACACGGCAGCTGGGGTGCTGGTCTGGAAATGCACACCAAGCCCTGGGTCAGAGCCAGAGCCCGTCGTGACTACTGGGAGAACCTGAAGCCAGCCTCTGGCCGGCCCCTGTGCGCCTCCCTGTCTGCTCCCGATTGCTGGGGTGTCACAAAAGGTGACACTGCCCTCATGCAGCAGAAAGAAGCAACCACAAAGGACCAACTGAAGCAGCTGTTCGACCGCAAAAGCAACTAAGACAACTCTTCTCCTTCAGACCATGCAACATAGTCGAATCAAGCAAAAAGTGTGACCTGGCAGTGCACGGTGGTTTGCACTGTGTCTGTCCAGCGCTGCTGCTTACACCCATGAAATCTCCTCTTGAGACTGTGATTTGAACGAAGCCACAGTGAGTTCCCCACTCACAGTAGGTGTAGCACCGTGTCAAGATTGGC]




>consensus_261#0
CTCCCAGTTTGATCAGAGAAACACGGCAGCTGGGGTGCTGGTCTGGAAATGCACACCAAG
CCCTGGGTCAGAGCCAGAGCCCGTCGTGACTACTGGGAGAACCTGAAGCCAGCCTCTGGC
CGGCCCCTGTGCGCCTCCCTGTCTGCTCCCGATTGCTGGGGTGTCACAAAAGGTGACACT
GCCCTCATGCAGCAGAAAGAAGCAACCACAAAGGACCAACTGAAGCAGCTGTTCGACCGC
AAAAGCAACTAAGACAACTCTTCTCCTTCAGACCATGCAACATAGTCGAATCAAGCAAAA
AGTGTGACCTGGCAGTGCACGGTGGTTTGCACTGTGTCTGTCCAGCGCTGCTGCTTACAC
CCATGAAATCTCCTCTTGAGACTGTGATTTGAACGAAGCCACAGTGAGTTCCCCACTCAC
AGTAGGTGTAGCACCGTGTCAAGATTGGC

consensusID : consensus_261#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 188
fasta sequence 
                              [TGGAAATGCACACCAGAGCCCTGGGTGATAGTGGGAGCCGTCGTGACTACTGGGAGAACCTGAAGCCATCCTCTGGCCGGGCCCTGTGCGCCTCCCTGTCTGCTCCCAATTGCTGGGGTGTCACAAAATGTGAGACTGGCCTCCTGTGCCAGATATAAGCAACCACAAAGGACCAACTGAAGCAGCTG]

[+] EMBL CA330109             [TGGAAATGCACACCAGAGCCCTGGGTGATAGTGGGAGCCGTCGTGACTACTGGGAGAACCTGAAGCCATCCTCTGGCCGGGCCCTGTGCGCCTCCCTGTCTGCTCCCAATTGCTGGGGTGTCACAAAATGTGAGACTGGCCTCCTGTGCCAGATATAAGCAACCACAAAGGACCAACTGAAGCAGCTG]




>consensus_261#1
TGGAAATGCACACCAGAGCCCTGGGTGATAGTGGGAGCCGTCGTGACTACTGGGAGAACC
TGAAGCCATCCTCTGGCCGGGCCCTGTGCGCCTCCCTGTCTGCTCCCAATTGCTGGGGTG
TCACAAAATGTGAGACTGGCCTCCTGTGCCAGATATAAGCAACCACAAAGGACCAACTGA
AGCAGCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_261#0      CTCCCAGTTTGATCAGAGAAACACGGCAGCTGGGGTGCTGGTCTGGAAATGCACACCA-A 59
consensus_261#1      -------------------------------------------TGGAAATGCACACCAGA 17
                                                                *************** *

consensus_261#0      GCCCTGGGTCAGAGCCAGAGCCCGTCGTGACTACTGGGAGAACCTGAAGCCAGCCTCTGG 119
consensus_261#1      GCCCTGGGTGATAGTGGGAGCC-GTCGTGACTACTGGGAGAACCTGAAGCCATCCTCTGG 76
                     ********* * **   ***** ***************************** *******

consensus_261#0      CCGGCCCCTGTGCGCCTCCCTGTCTGCTCCCGATTGCTGGGGTGTCACAAAAGGTGACAC 179
consensus_261#1      CCGGGCCCTGTGCGCCTCCCTGTCTGCTCCCAATTGCTGGGGTGTCACAAAATGTGAGAC 136
                     **** ************************** ******************** **** **

consensus_261#0      TGCCCTCATGCAGCAGAAAGAAGCAACCACAAAGGACCAACTGAAGCAGCTGTTCGACCG 239
consensus_261#1      TGGCCTCCTGTGCCAGATATAAGCAACCACAAAGGACCAACTGAAGCAGCTG-------- 188
                     ** **** **   **** * ********************************        

consensus_261#0      CAAAAGCAACTAAGACAACTCTTCTCCTTCAGACCATGCAACATAGTCGAATCAAGCAAA 299
consensus_261#1      ------------------------------------------------------------
                                                                                 

consensus_261#0      AAGTGTGACCTGGCAGTGCACGGTGGTTTGCACTGTGTCTGTCCAGCGCTGCTGCTTACA 359
consensus_261#1      ------------------------------------------------------------
                                                                                 

consensus_261#0      CCCATGAAATCTCCTCTTGAGACTGTGATTTGAACGAAGCCACAGTGAGTTCCCCACTCA 419
consensus_261#1      ------------------------------------------------------------
                                                                                 

consensus_261#0      CAGTAGGTGTAGCACCGTGTCAAGATTGGC 449
consensus_261#1      ------------------------------


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)