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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2657#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 652 fasta sequence
[CCCCTCATCGAGCATGTCCGGTCCGCTCAGCTGCTAGCATCAAGACATGGCCACGGACAAGCAAAACGAAGTTAAAGTTTCTCCATTGGGGGAAAAGAAAGAAAATTCATCCGATGGAGGACTAGGATTGGAAATTTTGCAAATCATCAAGGAGTCGCAGCAGCAGCACGGCCTCCGACACGGGGACTACCAGAGGTACAGGGGCTACTGCTCTCGCCGCCTGCGCCGCCTACGGAAGACCCTCGGCTTTAAGATGGGCAACCGACACAAGTTCATCGGGAAAAAGATAACCGCCGAGATGCTGTCGGACAGCAGGTACTTGTTGATGGTTCTAATGGAGGCGGAGCGTGCTTGGAGCTACGCCATGCAGCTCAAGCAGGAGGCCAACACGGAGCCACGCAAGCGCTTCCATCTGCTGTCACGACTCCGCAAGGCTGCCAAGCACAGCGAGAAGCTGGAGAAGCTCTGCGAGAGCCCTCGTGTGGACGCCAAGACCAAACTGGAGGCACAGGCGTATACAGCATATTTGACTGGGATGGTGGAGTTTGAATTGCAGGAGTGGAAACGAGCGATGGAGGCCTTCAACAAGTGCAAAACCATCTATGAGAAGCTGGCCAGTGCGTTCACCGAGGAGGTGGCAGTTCTGTACCGC]
[+] EMBL CA590460 [CCCCTCATCGAGCATGTCCGGTCCGCTCAGCTGCTAGCATCAAGACATGGCCACGGACAAGCAAAACGAAGTTAAAGTTTCTCCATTGGGGGAAAAGAAAGAAAATTCATCCGATGGAGGACTAGGATTGGAAATTTTGCAAATCATCAAGGAGTCGCAGCAGCAGCACGGCCTCCGACACGGGGACTACCAGAGGTACAGGGGCTACTGCTCTCGCCGCCTGCGCCGCCTACGGAAGACCCTCGGCTTTAAGATGGGCAACCGACACAAGTTCATCGGGAAAAAGATAACCGCCGAGATGCTGTCGGACAGCAGGTACTTGTTGATGGTTCTAATGGAGGCGGAGCGTGCTTGGAGCTACGCCATGCAGCTCAAGCAGGAGGCCAACACGGAGCCACGCAAGCGCTTCCATCTGCTGTCACGACTCCGCAAGGCTGCCAAGCACAGCGAGAAGCTGGAGAAGCTCTGCAAGAGCCCTCGTGTGGACGCCAAGACCAAACTGGAGGCACAGGCGTATACAGCATATTTGACTGGGATGGTGGAGTTTGAATTGCAGGAGTGGAAACGAGCGATGGAGGCCTTCAACAAGTGCAAAACCATCTATGAGAAGCTGGCC ]
[+] EMBL BU804905 [ GCATGTCCGGTCCGCTCAGCTGCTAGCATCAAGACATGGCCACGGACAAGCAAAACGAAGTTAAAGTTTCTCCATTGGGGGAAAAGAAAGAAAATTCATCCGATGGAGGACTAGGATTGGAAATTTTGCAAATCATCAAGGAGTCGCAGCAGCAGCACGGCCTCCGACACGGGGACTACCAGAGGTACAGGGGCTACTGCTCTCGCCGCCTGCGCCGCCTACGGAAGACCCTCGGCTTTAAGATGGGCAACCGACACAAGTTCATCGGGAAAAAGATAACCGCCGAGATGCTGTCGGACAGCAGGTACTTGTTGGTGGTTCTAATGGAGGCGGAGCGTGCTTGGAGCTACGCCATGCAGCTCAAGCAGGAGGCCAACACGGAGCCACGCAAGCGCTTCCATCTGCTGTCACGACTCCGCAAGGCTGCCAAGCACAGCGAGAAGCTGGAGAAGCTCTGCGAGAGCCCTCGTGTGGACGCCAAGACCAAACTGGAGGCACAGGCGTATACAGCATATTTGACTGGGATGGTGGAGTTTGAATTGCAGGAGTGGAAACGAGCGATGGAGGCCTTCAACAAGTGCAAAACCATCTATGAGAAGCTGGCCAGT ]
[+] EMBL CA590135 [ CCGCTCAGCTGCTAGCATCAAGACATGGCCACGGACAATCAAAACGAAGTTAAAGTTTCTCCATTGGGGGAAAAGAAAGAAAATTCATCCGATGGAGGACTAGGATTGGAAATTTTGCAAATCATCAAGGAGTCGCAGCAGCAGCACGGCCTCCGACACGGGGACTACCAGAGGTACAGGGGCTACTGCTCTCGCCGCCTGCGCCGCCTACGGAAGACCCTCGGCTTTAAGATGGGCAACCGACACATGTTCATCGGGAAAAAGATAACCGCCGAGATGCTGTCGGACAGCAGGTACTTGTTGATGGTTCTAATGGAGGCGGAGCGTGCTTGGAGCTACGCCATGCAGCTCAAGCAGGAGGCCAACACGGAGCCACGCAAGCGCTTCCATCTGCTGTCACGACTCCGCAAGGCTGCCAAGCACAGCGAGAAGCTGGAGAAGCTCTGCGAGAGCCCTCGTGTGGACGCCAAGACCAAACTGGAGGCACAGGCGTATACAGCATATTTGACTGGGATGGTGGAGTTTGAATTGCAGGAGTGGAAACGAGCGATGGAGGCCTTCAACAAGTGCAAAACCATCTATGAGAAGCTGGCCAGTGCGTTCACCGAGGAGGTGGCAGTTCTGTACCGC]
[+] EMBL CA590287 [ CCGCTCAGCTGCTAGCATCAAGACATGGCCACGGACAAGCAAAACCAAGTTAAAGTTTCTCCATTGGGGGAAAAGAAAGAAAATTCATCCGATGGAGGACTAGGATTGGAAATTTTGCAAATCATCAAGGAGTCGCAGCAGCAGCACGGCCTCCGACACGGGGACTACCAGAGGTACAGGGGCTACTGCTCTCGCCGCCTGCGCCGCCTACGGAAGACCCTCGGCTTTAAGATGGGCAACCGACACAAGTTCATCGGGAAAAAGATAACCGCCGAGATGCTGTCGGACAGCAGGTACTTGTTGATGGTTCTAATGGAGGCGGAGCGTGCTTGGAGCTACGCCATGCAGCTCAAGCAGGAGGCCAACACGGAGCCACGCAAGCGCTTCCATCTGCTGTCACGACTCCGCAAGGCTGCCAAGCACAGCGAGAAGCTGGAGAAGCTCTGCGAGAGCCCTCGTGTGGACGCCAAGACCAAACTGGAGGCACAGGCGTATACAGCATATTTGACTGGGATGGTGGAGTTTGAATTGCAGGAGTGGAAACGAGCGATGGAGGCCTTCAACAAGTGCAAAACCATCTATGAGAAGCTGGCCAGTGCGTTCACCGAGGAGGTGGCAGTTCTG ]
[+] EMBL CA332969 [ GCTCAGCTGCTAGCATCAAGACATGGCCACGGACAATCTTAACCCAGTTAAAGTTTCTCCATTGGGGGAAAAGAAAGAAAATTCATCCGATGGAGGACTAGGATTGGAAATTTTGCAAATCATCAAGGAGTCGCAGCAGCAGCACGGCCTCCGACACGGGGACTACCAGAGGTACAGGGGCTACTGCTCTCGCCGCCTGCGCCGCCTACGGAAGACCCTCGGCTTTAAGATGGGCAACCGACACTTGTTCATCGGGAAAAAGATAACCGCCGAGATGCTGTCGGACAGCAGGTACTTGTTGATGGTTCTAATGGAGGCGGAGCGTGCTTGGAGCTACGCCATGCAGCTCAAGCAGGAGGCCAACACGGAGCCACGCAAGCGCTTCCATCTGCTGTCACGACTCCGCAAGGCTGCCAAGCACAGCGAGAAGCTGGAGAAGCTCTGCGAGAGCCCTCGTGTGGACGCCAAGACCAAACTGGAGGCACAGGCGTATACAGCATATTTGACTGGGATGGCGGAGTTTGAATTGCAGGAGTGGAAACGAGCGATGGAGGCCTTCAACAAGTGCAAAACCATCTATGAAAAG ]
[+] EMBL FR0063460 [ ATGGCCACGGACAAGCAAAACGAAGTTAAAGTTTCTCCATTGGGGGAAAAGAAAGAAAATTCATCCGATGGAGGACTAGGATTGGAAATTTTGCAAATCATCAAGGAGTCGCAGCAGCAGCACGGCCTCCGACACGGGGACTACCAGAGGTACAGGGGCTACTGCTCTCGCCGCCTGCGCCGCCTACGGAAGACCCTCGGCTTTAAGATGGGCAACCGACACAAGTTCATCGGGAAAAAGATAACCGCCGAGATGCTGTCGGACAGCAGGTACTTGTTGATGGTTCTAATGGAGGCGGAGCGTGCTTGGAGCTACGCCATGCAGCTCAAGCAGGAGGCCAACACGGAGCCACGCAAGCGCTTCC ]
[+] EMBL CA332742 [ TTAAAGTTTCTCCATTGGGGGAAAAGAAAGAAAATTC TCCGATGGAGGACTAGGATTGGAAATTTTGCAAATCATCAAGGAGTCGCAGCAGCAGCACGGCCTCCGACACGGGGACTACCAGAGGTACAGGGGCTACTGCTCTCGCCGCCTGCGCCGCCTACGGAAGACCCTCGGCCTTAAGATGGGCAACCGACACTTGTTCATCGGGAAAAAGATAACCGCCGAGATGCTGTCGGACAGCAGGTACTTGTTGATGGTTCTAATGGAGGCGGAGCGTGCTTGGAGCTACGCCATGCAGCTCAAGCAGGAGGCCAACACGGAGCCACGCAAGCGCTTCCATCTGCTGTCACGACTCCGCAAGGCTGCCAAGCACAGCGAGAAGCTGGAGAAGCTCTGCGAGAGCCCTCGTGTG ]
[+] EMBL FR0063821 [ GGGGGGAAGAAAGAAAATTCATCCGATGNAGGACTAGCATTGGAAATTTTGCAAATCAT AAGGAGTCGCAGCAGCAGCACGGCCTCCGACACGGGGACTACCAGAGGTACAGGGGCTACTGCTCTCGCCGCCTGCGCCGCCTACGGAAGACCCTCTGCTTTAAGATGGGCAACCGACACAAGTTCATCGGGAAAAAGATAACCGCCGAGATGCTGTCGGACAGCAGGTACTTGTTGGATGGTCTAATGGAGGCGGAGCGTGCTTGGAGCTACGCCATGCAGCTCAAGCAGGAGGGCAACACGGAGCCACGCAAGCGCTCCCATCTGCTGGCACGACTCCGCAAGc ]
[+] EMBL BU807565 [ ATTCATCCGATGGAGGACTAGGATTGGAAATTTTGCAAATCATCAAGGAGTCGCAGCAGCAGCACGGACTCCGACACGGGGACTACCAGAGGGACAGGGGATACTGCTCTCACCGACTGCGACGCCTACAGAAGACCCTCGGCTTTAAAATGGGAAACCGACATTAG ]
consensusID : consensus_2657#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence
[GCATGCACCTTCACTTCTGCAACATTTGTGGGTTAAACATCCAGGCTGCTGTGGTGTTTGCACACGTGCACTGTCCAACAGCAACATCATCTACAGGCAACATCATCCAGGCCTCAGGTGGGGCGTCAACATCTGCATTAGCATGAAGAAGCAGCAGTGTTTGCTGGGCCTCCCCTCTAGAAAGGTGTCTAATAAACTGTTGGACCGGGTTTAGATTGTTCCCCACAGCTGATCACAGGCTGCAGCTCTGCTCAGGAATATTCAGTGGCTCCTCTTTAGCTGCTAAATCTCCGTCTGGATAAATTAAAACACCTTAAACGCGTGGTTCGGTTCGGTTCGGTTCGGTGTATTTGCTTCTTTTGCCGGGTCCATTTTTCCACTCTTGGATCCACTTCATGTTTCAACCACAGCGGCGACATTGAAGGAATCGTCGCTTGACAAGAAGACGAAGAAGAATCCTAATCTCGCGAGACCGAGACGTGATTTCGGTGCTCCCCGGTCATTGGATCACGAGCCCCCCTCATCGAGCATGTCCGGTCCGCTCAGCTGCTAGCATCAAGACATGGCCACGGACAAGCAAAACGAAGTTAAAGTT]
[+] EMBL BU807506 [GCATGCACCTTCACTTCTGCAACATTTGTGGGTTAAACATCCAGGCTGCTGTGGTGTTTGCACACGTGCACTGTCCAACAGCAACATCATCTACAGGCAACATCATCCAGGCCTCAGGTGGGGCGTCAACATCTGCATTAGCATGAAGAAGCAGCAGTGTTTGCTGGGCCTCCCCTCTAGAAAGGTGTCTAATAAACTGTTGGACCGGGTTTAGATTGTTCCCCACAGCTGATCACAGGCTGCAGCTCTGCTCAGGAATATTCAGTGGCTCCTCTTTAGCTGCTAAATCTCCGTCTGGATAAATTAAAACACCTTAAACGCGTGGTTCGGTTCGGTTCGGTTCGGTGTATTTGCTTCTTTTGCCGGGTCCATTTTTCCACTCTTGGATCCACTTCATGTTTCAACCACAGCGGCGACATTGAAGGAATCGTCGCTTGACAAGAAGACGAAGAAGAATCCTAATCTCGCGAGACCGAGACGTGATTTCGGTGCTCCCCGGTCATTGGATCACGAGCCCCCCTCATCGAGCATGTCCGGTCCGCTCAGCTGCTAGCATCAAGACATGGCCACGGACAAGCAAAACGAAGTTAAAGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2657#0 ------CCCCTCA-TCGAGCATGTCCGGTCCGCTCAGCTGCTAGCATCAAGACATGGCCA 53
consensus_2657#1 GCATGCACCTTCACTTCTGCAACATTTGTGGGTTAAACATCCAGGCTGCTGTGGTGTTTG 60
** *** * *** ** * * * * * ** * * **
consensus_2657#0 CGGACAAGCAAAACGAAGTTAAAGTTTCTCCATTGGGGGAAAAGAAAGAAAATTCATCCG 113
consensus_2657#1 CACACGTGCACTGTCCAACAGCAACATCATCTACAGGCAACATCATCCAGGCCTCA---G 117
* ** *** * * ** * ** * * * * *** *
consensus_2657#0 ATGGAGGACTAGGATTGGAAATTTTGCAAATCATCAAGGAGTCGCAGCAGCAGCACGGCC 173
consensus_2657#1 GTGGGGCGTCAACATCTGCATT-------AGCATGAAGAAGCAGCAGTGTTTGCTGGGCC 170
*** * * ** * * * * *** *** ** **** ** ****
consensus_2657#0 TCCGACACGGGGAC-TACCAGAGGTACAGGGGCTACTGCTCTCGCCG--CCTGCGCCGCC 230
consensus_2657#1 TCCCCTCTAGAAAGGTGTCTAATAAACTGTTGGACCGGGTTTAGATTGTTCCCCACAGCT 230
*** * * * * * ** * * * * * * * * * * **
consensus_2657#0 TACGGAAGACCCTCGGCTTTAAGATGGGCAACCGACACAAGTTCATCGGGAAAAAGATAA 290
consensus_2657#1 GATCACAGGCTGCAGCTCTGCTCAGGAATATTCAGTGGCTCCTCTTTAGCTGCTAAATCT 290
* ** * * * * * * * ** * * * **
consensus_2657#0 CCGCCGAGATGCTGTCGGACAGCAGGTACTTGTTGATGGTTCTAATGGAGGCGGAGCGTG 350
consensus_2657#1 CCGTCTGGATAAATTAAAACACCTTAAACGCGTGGTTCGGTTCGGTTC-GGTTCGGTGTA 349
*** * *** * *** * ** ** * * * * * ** * **
consensus_2657#0 CTTGGAGCTACGCCATGCAGCTCAAGCAGGAGGCCAACACGGAGCCACGCAAGCGCTTCC 410
consensus_2657#1 TTT---GCTTCTTTTGCCGGGTCCATTTTTCCACT--CTTGGATCCACTTCATG--TTTC 402
** *** * * * ** * * * *** **** * ** *
consensus_2657#0 ATCTGCTGTCACGACTCCGCAAGGCTGCCAAGCACAGCGAGAAGCTGGAGAAGCTCTGCG 470
consensus_2657#1 AACCACAGCGGCGACATTG-AAGGAATCGTCGCTTGACAAGAAGACGAAGAAGAATCCTA 461
* * * * **** * **** * ** * ***** * *****
consensus_2657#0 AGAGCCCTCGTGTGGACGCCAAGACCAAACTGGAGGCACAGGCGTATACAGCATATTTGA 530
consensus_2657#1 A----TCTCGCGAGACCGAGACGTGATTTCGGTGCTCCCCGGTCATTGGATCACGAGCCC 517
* **** * * ** * * * * * * ** * * **
consensus_2657#0 CTGGGATGGTGGA-GTTTGAATTGCAGGAGTGGAAACGAGCGATGGAGGCCTTCAACAAG 589
consensus_2657#1 CCCTCATCGAGCATGTCCGGTCCGCTCAGCTGCTAGCATCAAGACATGGCCACGGACAA- 576
* ** * * * ** * ** ** * * **** ****
consensus_2657#0 TGCAAAACCATCTATGAGAAGCTGGCCAGTGCGTTCACCGAGGAGGTGGCAGTTCTGTAC 649
consensus_2657#1 -GCAAAACGAAGTTAAAGTT---------------------------------------- 595
******* * * **
consensus_2657#0 CGC 652
consensus_2657#1 ---
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |