Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2659 cluster # 2659       Sequences # 11       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2659#0 length = 485 sequences # 11  
consensusID : consensus_2659#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 485
fasta sequence 
                              [CCGAATTCGGCACGAGGCCTCACCTACGAGCCGATATGGCCCCAACTA-AGAAAGGAGAGAAAAAGAAGGGGCGGTCAGCCATCAACGAAGTGGTGACCAGAGAGTACACCATCAATGTCCACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGCCGTACAGGATACGCGTCCGTCTGTCCAGGAAGCGTAACGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTCCTGTCACCACATGCAAAGGTCTCCAGACGGTCAATGTTGATGAAAACTAAAGATTTATCCCTCTGCCTGTGGAATAAATCAGATGGACAGACANAAGAGAAAAAGAAACCCCCGGGGGGGGCCCG]

[-] EMBL CA588743             [CCGAATTCGGCACGAGGCCTCACCTACGAGCCGATATGGCCCCACCTA AGAAAGGAGAGAAAAAGAAGGGGCGGTCAGCCATCAACGAAGTGGTGACCAGAGAGTACACCATCAATGTCCACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGCCGTACAGGATACGCGTCCGTCTGTCCAGGAAGCGTAACGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTCCT                                                                                                                           ]
[+] EMBL FR0056230            [                             GCCGATATGGCCCCAACTAGGGAAAGGAGAGAAAAAGAAGGGGCGGTCAGCCATCAACGAAGTGGTGACCAGAGAGTACACCATCAATGTCCACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGGCATCAAGGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGCCGTACAGGATACGCGTCCGTCTGTCCAGGAAGCGTAACCGGGATGTGGACTCCCCTAGCAAACTGTACACTCTGGGCACATACGTTCCTGTCACCA                                                                                                                    ]
[+] EMBL CA847278             [                             aaCGATATGGCCCCAACTA AGAAAGGAGAGAAAAAGACCTGGCGGTCAGCCATCAACGAAGTGGTGACCAGAGAGTACACCATCAATGTCCACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGCCGTACAGGATACGCGTCCGTCTGTCCAGGAAGCGTAACGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTCCTGTCACCTCATGCAAAGGTCTCCAGACGGTCAATGTTGATGAAAACTAAAGATTTATCCCTCTGCCTGTGGAATAAATCAGATGGACA                                    ]
[+] EMBL CA846914             [                                 ATATGGCCCCAACTA AGAAAGGAGAGAAAAAGAAGGGGCGGTCAGCCATCAACGAAGTGGTGACCAGAGAGTACACCATCAATGTCCACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGCCGTACAGGATACGCGTCCGTCTGTCCAGGAAGCGTAACGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTCCTGTCACCACATGCAAAGGTCTCCAGACGGTCAATGTTGATGAAAACTAAAGATTTATCCCTCTGCCTGTGGAATAAATCAGATGGAC                                     ]
[+] EMBL CA847084             [                                  TATGGCCCCAACTA AGAAAGGAGAGAAAAAGAAGGGTCGGTCAGCCATCAACGAAGTGGTGACCAGAGAGTACACCATCAATGTCCACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGCCGTACAGGATACGCGTCCGTCTGTCCAGGAAGCGTAACGAGGATGAGGACTCCCCCAACAAACTGTACACTCTGGTCACATACGTTCCTGTCACCACATGCAAAGGTCTCCAGACGGTCAATGTTGATGAAAACTAAAGATTTATCCCTCTGCCTGTGGAATAAATCAGATGGACAGAC                                 ]
[+] EMBL CA844824             [                             cttttgATGGCCCCAACTA AGAAAGGAGAGAAAAAGAAGGGGCGGTCAGCCATCAACGAAGTGGTGACCAGAGAGTACACCATCAATGTCCACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGTCGTACAGGATACGCGTCCGTCTGTCCAGGAAGCGTAACGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTCCTGTCACCACATGCAAAGGTCTCCAGACGGTCAATGTTGATGAAAACTAAAGATTTATCCCTCTGCCTGTGGAATAAATCAGATGGACAGAC                                 ]
[+] EMBL FR0055582            [                                                     AGGAGAGAAAAAGTAGGCGCGGTCAGCCATCAACGAAGTGGTGACCAGAGAGTACACCATCAATGTCAACACACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGCCGTACAGGATACGCGTCCGTCTGTCCAGGAAGCGTATCGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTCCTGTCACCACATGCAAAGGTCTCCAGACGGTCAATGTTGAAGACAACTAAAGATTTATC                                                                  ]
[+] EMBL FR0056670            [                                                                   AGGGGCGGTCAGCCATCAACGAAGTGGTGACCAGAGAGTACACCATCAATGTCCACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGCCGTACAGGATACGCGTCCGTCTGTCCAGGAAGCGTAACGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTCCTGTCACCACATGCAAAGGTCTCCAGACGGTCAATGTTGATGAAAACTAAAGATTTATCCCTCTGCCTGTGGGATA                                                 ]
[+] EMBL FR0056839            [                                                                                                                      TCCACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGCCGTACAGGATACGCGTCCGTCTGTCCAGGAAGCGTAACGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTCCTGTCACCACATGCAAAGGTCTCCAGACGGTCAATGTTGATGAAAACTAAAGATTTATCCCTCTGCCTGTGGAATAAATCAGATGGACAGACANAAGAGAAAAAGAAACCCCCGGGGGGGGCCCG]
[+] EMBL CA846760             [                                                                                                                      TCCACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCCGCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACAAGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGTC TACTTGATACGCGTCCGTCTGTCCAGGAAGCGTAACGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTCCTGTCACCACATGCAAAGGTCTCCAGACGGTCAATGTTGATGAAAACTAAAGATTTATCCCTCTGCCTGTGGAATAAATCAGATGGACAGA                                  ]
[+] EMBL CA847001             [                                                                                                                                                                                                                                                                           AATGTGCCGTACAGGATACGCGTCCGTCTGTCCACCTAGCGTAACGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTCCTGTCACCACATGCAAAGGTCTCCAGACGGTCAATGTTGATGAAAACTAAAGATTTATCCCTCTGCCTGTGGAATAAATCAGATGGAC                                     ]




>consensus_2659#0
CCGAATTCGGCACGAGGCCTCACCTACGAGCCGATATGGCCCCAACTAAGAAAGGAGAGA
AAAAGAAGGGGCGGTCAGCCATCAACGAAGTGGTGACCAGAGAGTACACCATCAATGTCC
ACAAACGTATCCATGGAGTGGGTTTTAAGAAAAGGGCCCCACGTGCCATCAAAGAAATCC
GCAAGTTTGCTGTGAAGGAGATGGGAACTCCTGATGTCCGTATTGACACTCGCCTTAACA
AGGCAGTGTGGAGCAAGGGTGTCAGGAATGTGCCGTACAGGATACGCGTCCGTCTGTCCA
GGAAGCGTAACGAGGATGAGGACTCCCCTAACAAACTGTACACTCTGGTCACATACGTTC
CTGTCACCACATGCAAAGGTCTCCAGACGGTCAATGTTGATGAAAACTAAAGATTTATCC
CTCTGCCTGTGGAATAAATCAGATGGACAGACANAAGAGAAAAAGAAACCCCCGGGGGGG
GCCCG

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)