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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2681#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 596 fasta sequence
[CTTCCTCAAGAGACACACAGAGACAATGGCTCCTCGTAAAGGGAAAGAGAAGAAGGAGGAGCAGGTTATCAGCCTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACT-GGAGGAAACAGGACAAAGACTCCTGGTCCTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACGTCACTCCAATTCCATCAGATTCAACCCGAAGGAAGGGTGGACGTCGCGGTCGCCGTCTGTAAAACTGCATCAGATTTTTTTTCTGCTAATAAAAAGCGAAACCAAGTTTTGTGCACACACTTGTGTAACTCTGTTCACCCGGCAGTTCACTGTGTTGTACTAAAACACGATCCCAAA]
[+] EMBL CA589422 [CTTCCTCAAGAGACACACAGAGACAATGGCTCCTCGTAAAGGGAAAGAGAAGAAGGAGGAGCAGGTTATCAGCCTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACT GGAGGAAACAGGACAAAGACTCCTGGTCCTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACGTCACTCCAATTCCATCAGATTCAACCCGAAGGAAGGGTGGACGTCGCGGTCGCCGTCTGTAAAACTGCATCAGATTTTTTTTCTGCTA ]
[+] EMBL CA589281 [CTTCCTCAAGAGACACACAGAGACAATGGCTCCTCGTAAAGGGAAAGAGAAGAAGGAGGAGCAGGTTATCAGCCTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACT GGAGGAAACAGGACAAAGACTCCTGGTCTTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACGTCACTCCAATTCCATCAGATTCAACCCGAAGGAAGGGTGGACGTCGCGGTC ]
[-] EMBL CA332513 [ CTCGTAAAGGGAAAGAGAAGAAGGAGGAGCAGGTTATCAGCCTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACT GGAGGAAACAGGACAAAGACTCCTGGTCTTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACGTCACTCCAATTCCATCAGATTCAACCCGAAGGAAGGGTGGACGTCGCGGTCGCCGTCTGTAAAACTGCATCAGATTTTTTTTCTGCTAATAAAAAGCG ]
[-] EMBL CA588815 [ AAAGGGAAAGAGAAGAAGGAGGAGCAGGTTATCAGCCTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACT GGAGGAAACAGGACAAAGACTCCTGGTCCTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACGTCACTCCAATTCCATCAGATTCAAAAAGAAGGAAGGGTG ]
[+] EMBL FR0058156 [ GAAAGAGAAGAAGGAGGAGCAGGTTATCAGCCTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACT GGAGGAAACAGGACANAGACTCCTGNTCCTGGAGCTCAGT ]
[+] EMBL FR0055500 [ AGGTTATCAGCCTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAGGGAAACAATCTGCCGTGTGACAGGCGGTATGAGGGTGAAGGCAGACAGAGATGAGTCGTCTCGATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCATCGAGCTTGGGGACACTGCGCTGCACATCAAGTTGAGAGCCACTGGGAGGAGACAGGGCAAA ]
[+] EMBL CA330379 [ GTTATCAGCCTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACT GGAGGAAACAGGACAAAGACTCCTGGTCCTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACGTCACTCCAATTCCATCAGATTCAACCCGAAGGAAGGGTGGACGTCGCGGTCGCCGTC ]
[+] EMBL FR0056182 [ AGCCTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACT GGAGGAAACAGGACAAAGACTCCTGGTCCTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACGTCACTCCAATTCCATCAGATTCAACCCGAAGGAAGGGTGGACGTCGCGGTCGCCGTCTGTAAAACTGCATCAGATTTTTTTTC ]
[+] EMBL FR0056634 [ CTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACT GGAGGAAACAGGACAAAGACTCCTGGTCCTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACGTCACTCCAATTCCATCAGATTCAACCCGAAGGAAGGGTGGACGTCGCGGTCGCCGTCTGTAAAACTGCAAC ]
[+] EMBL FR0055757 [ TCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCACACAGCTTGGTATCACTGCTCTGCACATCAAGTTGAGAGCCACT GGTGGAAACAGGACAAAGACTCCTGGTCCTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACGTCACTCCAATTCCATCAGATTCAACCCGAATGAAGGGTGGACGTCGCGGTCGCCGTCTGTAAAACTGCATCAGATTTTTTTT ]
[+] EMBL CA333469 [ ACTCCTGGTCCTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACGTCACTCCAATTCCATCAGATTCAACCCGAAGGAAGGGTGGACGTCGCGGTCGCCGTCTGTAAAACTGCATCAGATTTTTTTTCTGCTAATAAAAAGCGAAACCAAGTTTTGTGCACACACTTGTGTAACTCTGTTCACCCGGCAGTTCACTGTGTTGTACTAAAACACGATCCCAAA]
consensusID : consensus_2681#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 395 fasta sequence
[TTCGCTTTTTATTAGCAGAAAAAAAATCTGATGCAGTTTTACAGACGGCGACCGCGACGTCCACCCTTCCTTCGGGTTGAATCTGATGGAATTGGAGTGACGTCCTCTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACTGGAGGAAACAGGACAAAGACTCCTGGTCCTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAA]
[-] EMBL CA845091 [TTCGCTTTTTATTAGCAGAAAAAAAATCTGATGCAGTTTTACAGACGGCGACCGCGACGTCCACCCTTCCTTCGGGTTGAATCTGATGGAATTGGAGTGACGTCCTCTGTGTGTCACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAACAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCATATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTGCTCTGCACATCAAGTTGAGAGCCACTGGAGGAAACAGGACAAAGACTCCTGGTCCTGGAGCTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2681#0 CTTCCTCAAGAGACACACAGAGACAATGGCTCCTCGTAAAGGGAAAGAGAAGAAGGAGGA 60
consensus_2681#1 TTCGCTTTTTATTAGCAGAAAAAAAAT-----CTGATGCAGTTTTACAGACGGCGACCGC 55
* ** * ** * * * *** ** * ** * *** * * *
consensus_2681#0 GCAGGTTATCAG-CCTGGGTCCTCAGGTGGCTGAAGGAGAGAACGTGTTTGGTGTGTGTC 119
consensus_2681#1 GACGTCCACCCTTCCTTCGGGTTGAATCTGATGGAATTGGAGTGACGTCCTCTGTGTGTC 115
* * * * *** * * * * ** * * ** ********
consensus_2681#0 ACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAA 179
consensus_2681#1 ACATCTTCGCCTCCTTCAACGATACCTTTGTCCATGTCACTGACCTGTCTGGCAAGGAAA 175
************************************************************
consensus_2681#0 CAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCAT 239
consensus_2681#1 CAATCTGCCGTGTGACAGGCGGTATGAAGGTGAAGGCAGACAGAGATGAGTCTTCTCCAT 235
************************************************************
consensus_2681#0 ATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTG 299
consensus_2681#1 ATGCTGCCATGTTGGCAGCTCAGGATGTTGCCCAGCGCTGCAAAGAGCTTGGAATCACTG 295
************************************************************
consensus_2681#0 CTCTGCACATCAAGTTGAGAGCCACTGGAGGAAACAGGACAAAGACTCCTGGTCCTGGAG 359
consensus_2681#1 CTCTGCACATCAAGTTGAGAGCCACTGGAGGAAACAGGACAAAGACTCCTGGTCCTGGAG 355
************************************************************
consensus_2681#0 CTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAAAATTGGACGCATAGAGGACG 419
consensus_2681#1 CTCAGTCTGCCCTCAGAGCTCTGGCTCGTTCCGGCATGAA-------------------- 395
****************************************
consensus_2681#0 TCACTCCAATTCCATCAGATTCAACCCGAAGGAAGGGTGGACGTCGCGGTCGCCGTCTGT 479
consensus_2681#1 ------------------------------------------------------------
consensus_2681#0 AAAACTGCATCAGATTTTTTTTCTGCTAATAAAAAGCGAAACCAAGTTTTGTGCACACAC 539
consensus_2681#1 ------------------------------------------------------------
consensus_2681#0 TTGTGTAACTCTGTTCACCCGGCAGTTCACTGTGTTGTACTAAAACACGATCCCAAA 596
consensus_2681#1 ---------------------------------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |