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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2691#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 762 fasta sequence
[AGCTTCACAGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTACGTGAGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTGAGCACAATATAAAGATCGGGTA--CAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCGCCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTTGTCTCTGGCTGGATTCATCTACTTCAAGAGAAAATCTCGAGGGAGGATCCTGGTTCCCAATAACT]
[+] EMBL BU806271 [AGCTTCACAGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTCCAAAGTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCACTTTACTACAGCAGAGTGATGTATGCCCGCTTCAGCAGCCGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTGCATCAGGCGGATTACTGGAATAATCAGAGTTCAATTCTGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTCAGTACAATATAAAGATCTGGTA CAGCAACATTCTGTCAAAGTCCGTGGAACCAGAGGTCATTGTGCACTCGGTGGCGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAAATACATCAAAGTGAGCTGGCTCAGAGATGGAGAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCGTTTGACCAAAGACTGGGACCCATCCATGCCT ]
[+] EMBL CA846190 [cGCTTCACAGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAATATTATGTGGTGTCTCGCTGTAGTTTTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCAGTTTACTACAACAAACTGATGTATGCCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTATTCCAGGCGGATTACTGGAATAATCAGAGTTCAATTCTGGAGCAGGTGAGGGATAATAAGGAGCGATACTGTCAGCACAATATAAAGAACTGGTA CAGCAACATTCTGTCAAAGTCCGTGGAGCCAGAGGTCATTGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAGAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCGCCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTTGTCTCTGGCTGGATTCATCTACTTCAAGAGAAAATCTCGAGGGAGGATCCTGGTTCCCAATAACT]
[+] EMBL CA588268 [ CTTTA AGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTTATCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATTCGGATTACGTGTGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGACTGCGAAGGAGCGATACTGTGAGCACAATATAAAGATCGATTA CAGCAACATTCTGTCAAAGTCCGTTGATCCCACTGTTCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGGGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCGCCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTCGTCTCTGGCTGGATTCATCTACTTCAAGAGAAAATCTCGAGGGAGGATC ]
[+] EMBL CA588440 [ acccttCAGGAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCC CTTAATAAGCCTGTACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGCAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATTCGGATTACGTGTGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGACTGCGAAGGAGCGATACTGTGAGCACAATATAAAGATCGATTA CAGCAACATTCTGTCAAAGTCCGTTGAGTTTTCTGTTCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAAAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCGCCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTTGTCTCTGGCTGGATTCATCTACTTCAAGAGAAAATCTCGAGGGAGGATC ]
[+] EMBL CA846655 [ TCAGAGTCTTCCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATTGGGTGGATCGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCAGTTTACTACCACAAAGTGATGTTTGCCCGCTTCCGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAAGACGGATTGCATCAGGCGGACGGCTGGAATAATATGACTTCATATCTGGAGCAGATGAGGGATCAGAAGGAGCGATACTGTGAGCCCAATATAAAGGTCTGGTA CAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCGTGTTGGTCTGCAGCGTCTACGACTTCTACCCCAAATACATCAAAGTGAGCTGGCTCAGAGATGGAAAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCGTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCT ]
[+] EMBL FR0058748 [ TCAGAGTCTTCCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATGGGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATTCGGATTACGTGTGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGACTGCGAAGGAGCGATACTGTGAGCACAATATAAAGATCGATTA CAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTCCGAGTGCACTCGGTGGGGCCCC ]
[+] EMBL CA591141 [ CCTCCTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATTCGGATTACGTGTGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGACTGCGAAGGAGCGATACTGTGAGCACAATATAAAGATCGATTA CAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGGGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGAAAACCCCTTTGGTCTAAGACTGGGACC ]
[+] EMBL FR0058402 [ CTCTTCATCAGCCTGTACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATCTGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATTCGGATTACGTGTGGCGGACGGCTGGAATAATCAGAGTTCATATCTGGAGCAGATGAGGACTGCGAAGGAGCGATACTGTGAGCACAATATAAAGATCGATTA CAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTCCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAAAGAGATGGAAAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTC ]
[+] EMBL FR0062970 [ CGGCAGGTGGATTTCAATATTATTGGGGGTCTCGCTGTAGGTTTAACTCCACCGATCTGAAGGACATCGAGTTCACCAGATCACTTTACTACCACAAAGTGATGTTTGCCCGCTTCCGCAGCAGCGTGGGGAAGTTTGAGGGATTCACGAAAGACGGAATGCATCAGGCGGACGGCTGGAATAATCAGAGTTCATTTATGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTGAGCACAATATAAAGATCTGGTA CAGCAACATTCTGTCAGAGGCCGTTGAGCCCA ]
[+] EMBL CA844799 [ TTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCACATTACTACAACAAACTGATGTATGTCCGCTTCCGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAAGACGGATTGATTCAGGCGGATTACTGGAATAATATCAGTTCATATCTGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTGAGCCCAATATAAAGGTCTGGTATCTTTTTACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGAGTGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCGTGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAGAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCC ]
[+] EMBL CA846850 [ GCACTCGGTGGTGCCCCCTGCTGGAGGACATTCCGCCGCGTTGGTCTGCAGCGTCTACGACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAGAAGAGGTCAGCCAGGATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGATTACCCGTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCGCCCTCGGAGCATCAGGCCTGATCCTGGGCCTGATCTTGTCTCGGGCTGGATTCATCTAC ]
consensusID : consensus_2691#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 219 fasta sequence
[GTGGGGTTCAATATTATGTGGTGTCTCGCTGTAGTTTTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCAGGTTACTACAACAAACTGATGTATGCCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTATTCCAGGCGGATTACTGGAATAATCAGAGTTCAATTCTGGAGCAGATGAGGGATAATAAGGAGC]
[+] EMBL FR0061315 [GTGGGGTTCAATATTATGTGGTGTCTCGCTGTAGTTTTAACTCCACCGATCTGAAGGACATCGAATATTCCAGATCAGGTTACTACAACAAACTGATGTATGCCCGCTTCAGCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTATTCCAGGCGGATTACTGGAATAATCAGAGTTCAATTCTGGAGCAGATGAGGGATAATAAGGAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2691#0 AGCTTCACAGCAGGATGTCTTCATCATCTCTCAGAGTCTTCCTCCTCTTCATCAGCCTGT 60
consensus_2691#1 ------------------------------------------------------------
consensus_2691#0 ACACGGCAGGTGGATTTCAACTTTATTCGGTGGATAGCTGTGATTTTAACTCCACCGATC 120
consensus_2691#1 ---------GTGGGGTTCAATATTATGTGGTGTCTCGCTGTAGTTTTAACTCCACCGATC 51
**** ***** **** **** * ***** *****************
consensus_2691#0 TGAAGGACATCGAGTTTTCCAGATCACTTTACTACAACAAACTGATGCTTGTCCGCTTCA 180
consensus_2691#1 TGAAGGACATCGAATATTCCAGATCAGGTTACTACAACAAACTGATGTATGCCCGCTTCA 111
************* * ********** ******************* ** ********
consensus_2691#0 GCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTACGTGAGGCGGACGGCT 240
consensus_2691#1 GCAGCAGCGTGGGGAAGTTTGAGGGATACACGAAATACGGATTATTCCAGGCGGATTACT 171
******************************************** ******* **
consensus_2691#0 GGAATAATCAGAGTTCATATCTGGAGCAGATGAGGGATGAGAAGGAGCGATACTGTGAGC 300
consensus_2691#1 GGAATAATCAGAGTTCAATTCTGGAGCAGATGAGGGATAATAAGGAGC------------ 219
***************** ******************* * *******
consensus_2691#0 ACAATATAAAGATCGGGTACAGCAACATTCTGTCAAAGTCCGTTGAGCCCACTGTTCGAG 360
consensus_2691#1 ------------------------------------------------------------
consensus_2691#0 TGCACTCGGTGGTGCCCCCTGCTGGAGGACATCCCGCCATGTTGGTCTGCAGCGTCTACG 420
consensus_2691#1 ------------------------------------------------------------
consensus_2691#0 ACTTCTACCCCAGATACATCAAAGTGAGCTGGCAGAGAGATGGAAAAGAGGTCAGCCAGG 480
consensus_2691#1 ------------------------------------------------------------
consensus_2691#0 ATGTGACCTCCACGGACGAGCTGGCGGACGGCGACTGGTTCTACCAGCTGCACTCTCACC 540
consensus_2691#1 ------------------------------------------------------------
consensus_2691#0 TGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTGTGGTGGAGCACGCCAGCCTGA 600
consensus_2691#1 ------------------------------------------------------------
consensus_2691#0 AAACCCCTTTGGTCAAAGACTGGGACCCATCCATGCCTGAATCTGAGAGGAACCAGATCG 660
consensus_2691#1 ------------------------------------------------------------
consensus_2691#0 CCATCGGAGCATCAGGCCTGATCCTGGGTCTGATCTTGTCTCTGGCTGGATTCATCTACT 720
consensus_2691#1 ------------------------------------------------------------
consensus_2691#0 TCAAGAGAAAATCTCGAGGGAGGATCCTGGTTCCCAATAACT 762
consensus_2691#1 ------------------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |