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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2692#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1112 fasta sequence
[TTGGCTCCGGGCTCCTTCTTAAGGAGACAAAAAGACTGCAAGATGGGTTTTGTGAAAGTGGTGAAGAACAAGGCCTACTTCAAGAGGTACCAGGTCAAATTCAGGAGGAGGAGAGAGGGAAAGACTGACTACTTTGCTCGCAAGCGCCTTGTCGTACAGGATAAGAACAAGTACAACACACCCAAGTACCGGATGATTGTCCGTTTCTCCAACCGGGACATCGTCTGCCAGATTGCCTATGCCAAGATCGAGGGTGACATGATCGTGTGTGCGGCCTATTCACACGAGCTGCCAAAATACGGCGTCTCCGTGGGCTTGACAAATTACGCAGCAGCCTATTGCACCGGTTTGCTGCTGGCTCGCCGACTGCTGAACAAGTTTGGCCT-GGATAAGGTGTATGAAGGCCAGGTTGAGGTGACCGGTGAGGAATTCAATGTGGAGAGCATTGATGGTCAGCCAGGTGCTTTTACCTGCTATCTGGACGCTGGACTTGCAAGAACCACCACAGGCAACAAAGTATTTGGTGCAGTTAAGGGAGCTGTGGATGGAGGCCTGTCCATCCCACACAGCACAAAGCGTTTCCCCGGATACGACCCTGAGAGCAAGGAGTTTAACGCCGAGGCCCATCGCAAACACATCATGGGTATCAACGTGTCCGAGTACATGAGCTACCTGATGGAGGAGGACGAGGACACGTACAAAAAGCAATTCTCCCGCTTCATCAAGAATGGAGTAACTCCTGATATGATTGAAGAAATGTACAAAAAGGCTCATGCCTCCATTCGTGAGAACCCAGTCCACGAAAAGAAGCCTCCCAAAGAAGTCAAGAAGAAAAGGTGGAACCGTGCCAAGCTTTCTCTGGCCCAGAGGAAAGACCGTGTTGCCCAGAAGAAAGCCAGCTTCCTCCGGGCTCAGGAACAAGAGGCTTCAGACTGATGTGGTTCATCTGCTTCAGAAATCGTTCAATAAATTTATGAAAAAAGTCAAAAAAAAAAAAAAAAAAAAACCTGGGGGGGGGCCCGGACCCCAATTTTTGGCCCCTTTAGGGGGGGTTAAATATCTATGAGAACTGCGTGGTGACCCGCCGCTCACTGTAACCGTAGGACCTACCC]
[+] EMBL FR0057148 [TTGGCTCCGGGCTCCTTCTTAAGGAGACAAAAAGACTGCAAGATGGGTTTTGTGAAAGTGGTGAAGAACAAGGCCTACTTCAAGAGGTACCAGGTCAAATTCAGGAGGAGGAGAGAGGGAAAGACTGACTACTTTGCTCGCAAGCGCCTTGTCGTACAGGATAAGAACAAGTACAACACACCCAAGTACCGGATGATTGTCCGTTTCTCCAACCGGGACATCGTCTGCCAGATTGCCTATGCCAAGATCGAGGGTGACATGATCGTGTGTGCGGCCTATTCACACGAGCTGCCAAAATACGGGGTCTCCGTGGGCTTGACAGATTACGCAGCAGCCTATTGCACCGGTTTGCTGCTGGCTCGCCGACTGCTGAACAAGTTTGGCCTGGGATAATGTGTATGAAGGCCAGGTTGAGGTGACCGGTGAGGA ]
[+] EMBL CA330218 [ CGGGCTCCTTCTTAAGGAGACAAAAAGACTGCAAGATGGGTTTTGTGAAAGTGGTGAAGAACAAGGCCTACTTCAAGAGGTACCAGGTCAAATTCAGGAGGAGGAGAGAGGGAAAGACTGACTACTTTGCTCGCAAGCGCCTTGTCGTACAGGATAAGAACAAGTACAACACACCCAAGTACCGGATGATTGTCCGTTTCTCCAACCGGGACATCGTCTGCCAGATTGCCTATGCCAAGATCGAGGGTGACATGATCGTGTGTGCGGCCTATTCACACGAGCTGCCAAAATACGGCGTCTCCGTGGGCTTGACAAATTACGCAGCAGCCTATTGCACCGGTTTGCTGCTGGCTCGCCGACTGCTGAACAAGTTTGGCCT GGATAAGGTGTATGAAGGCCAGGTTGAGGTGACCGGTGAGGAATTCAATGTGGAGAGCATTGATGGTCAGCCAGGTGCTTTTACCTGCTATCTGGATGCTGGACTTGCAAGAACCACCACAGGCAACAAAGTATTTGGTGCAGTTAAGGGAGCTGTGGATGGAGGCCTGTCCATCCCACACAGCACAAAGCGTTTCCCCGGATACGACCCCGAGAGCAAGGAGTTTAACGCCGAGGCCCATCGC ]
[+] EMBL CA330838 [ TGGGTTTTGTGAAAGTGGTGAACCCCAAAGCCTACTTCGAGAGGTACCAGGTCAAATTCAGGAGGAGGAGAGAGGGAAAGACTGACTACTTTGCTCGCAAGCGCCTTGTCGTACAGGATAAGAACAAGTACAACACACCCAAGTACCGGATGATTGTCCGTTTCTCCAACCGGGACATCGTCTGCCAGATTGCCTATGCCAAGATCGAGGGTGACATGATCTTGTGTGCGGCCTATTCACACGAGCTGCCAAAATACGGCGTCTCCGTGGGCTTGACAAATTACGCAGCAGCCTATTGCACCGGTTTGCTGCTGGCTCGCCGACTGCTGAACAAGTTTGGCCT GGATAAGGTGTATGAAGGCCAGGTTGAGGTGACCGGTGAGGAATTCAATGTGGAGAGCATTGATGGTCAGCCAGGTGCTTTTACCTGCTATCTGGA ]
[+] EMBL CA588669 [ ccTTCAGGAGGAGGAGAGAGGGAAAGACTGACTACTTTGCTCGCAAGCGCCTTGTCGTACAGGATAAGAACAAGTACAACACACCCAAGTACCGGATGATTGTCCGTTTCTCCAACCGGGACATCGTCTGCCAGTTTGCCTATGCCAAGATCGAGGGTGACATGATCGTGTGTGCGGCCTATTCACACGAGCTGCCAAAATACGGCGTCTCCGTGGGCTTGATTTTTTATGCAGCAGCCTATTGCACCGGTTTGCTGCTGGCTCGCCGACTGCTGAACAAGTTTGGCCT GGATAAGGTGTATGAAGGCCAGGTTGAGGTGACCGGTGAGGAATTCAATGTGGAGAGCATTGATGGTCAGCCAGGTGCTTTTACCTGCTATCTGGACGCTGGACTTGCAAGAACCACCACAGGCAACAAAGTATTTGGTGCAGTTAAGGGAGCTGTGGATGGAGGCCTGTCCATCCCACACAGCACAAAGCGTTTCCCCGGATACGACCCTGAGAGCAAGGAGTTTAACGCCGAGGCCCATCGCAAACACATCATGGGTATCAACGTGTCCGAGTACATGAGCTACCTGATGGAGGAGGACGAGGACACGGACAAAAAGCAATTCTCCCGCTTCATCAAGAATGGAGTAACTCCTGATATGATTGAAGAA ]
[+] EMBL CA845201 [ CGTGGGCTTGACAAATTACGCAGCAGCCTATTGCACCGGTTTGCTGCTGGCTCGCCGACTGCTGAACAAGTTTGGCCT GGATAAGGTGTATGAAGGCCAGGTTGAGGTGACCGGTGAGGAATTCAATGTGGAGAGCATTGATGGTCAGCCAGGTGCTTTTACCTGCTATCTGGACGCTGGACTTGCAAGAACCACCACAGGCAACAAAGTATTTGGTGCAGTTAAGGGAGCTGTGGATGGAGGCCTGTCCATCCCACACAGCACAAAGCGTTTCCCCGGATACGACCCTGAGAGCAAGGAGTTTAACGCCGAGGCCCATCGCAAACACATCATGGGTATCAACGTGTCCGAGTACATGAGCTACCTGATGGAGGAGGACGAGGACACGTACAAAAAGCAATTCTCCCGCTTCATCAAGAATGGAGTAACTCCTGATATGATTGAAGAAATGTACAAAAAGGCTCATGCCTCCATTCGTGAGAACCCAGTCCACGAAAAGAAGCCTCCCAAAGAAGTCAAGAAGAAAAGGTGGAACCGTGCCAAGCTTTCTCTGGGCCAGAGGAAAGACCGTGTTGCCCAGAAGAAAGCCAGCTTCCTCCGGGCT ]
[+] EMBL CA333606 [ gcacGAGGACCGGTGAGGAATTCAATGTGGAGAGCATTGATGGTCAGCCAGGTGCTTTTACCTGCTATCTGGATGCTGGACTTGCAAGAACCACCACAGGCAACAAAGTATTTGGTGCAGTTAAGGGAGCTGTGGATGGAGGCCTGTCCATCCCACACAGCACAAAGCGTTTCCCCGGATACGACCCTGAGAGCAAGGAGTTTAACGCCGAGGCCCATCGCAAACACATCATGGGTATCAACGTGTCCGAGTACATGAGCTACCTGATGGAGGAGGACGAGGACACGTACAAAAAGCAATTCTCCCGCTTCATCAAGAATGGAGTAACTCCTGATATGATTGAAGAAATGTACAAAAAGGCTCATGCCTCCATTCGTGAGAACCCAGTCCACGAAAAGAAGCCTCCCAAAGAAGTCAAGAAGAAAAGGTGGAACCGTGCCAAGCTTTCTCTGGCCCAGAGGAAAGACCGTGTTGCCCAGAAGAAAGCCAGCTTCCTCCGGGCTCAGGAACAAGAGGCTTCAGACTGATGTGGTTCATCTGCTTCAGAAATCGTTCAATAAATTTATGAAAAA ]
[+] EMBL CA330203 [ CAAAAAGGCTCATGCCTCCATTCGTGAGAACCCAGTCCACGAAAAGAAGCCTCCCAAAGAAGTCAAGAAGAAAAGGTGGAACCGTGCCAAGCTTTCTCTGGCCCAGAGGAAAGACCGTGTTGCCCAGAAGAAAGCCAGCTTCCTCCGGGCTCAGGAACAAGAGGCTTCAGACTGATGTGGTTCATCTGCTTCAGAAATCGTTCAATAAATTTATGAAAAAAGTCAAAAAAAA ]
[+] EMBL CA845533 [ GCCTCCCAAAGAAGTCAAGAAGAAAAGGTGGAACCGTGCCAAGCTTTCTCTGGCCCAGAGGAAAGACCGTGTTGCCCAGAAGAAAGCCAGCTTCCTCCGGGCTCAGGAACAAGAGGCTTCAGACTGATGTGGTTCATCTGCTTCAGAAATCGTTCAATAAATTTATGAAAAAAG ]
[+] EMBL CA845426 [ GAAGTCAAGAAGAAAAGGTGGAACCGTGCCAAGCTTTCTCTGGCCCAGAGGAAAGACCGTGTTGCCCAGAAGAAAGCCAGCTTCCTCCGGGCTCAGGAACAAGAGGCTTCAGACTGATGTGGTTCATCTGCTTCAGAAATCGTTCAATAAATTTATGAAAAAAGTC ]
[+] EMBL CA845717 [ GGGCTCAGGAACAAGAGGCTTCAGACTGATGTGGCTTATAAACTTCAGAAATCGTTCAATAAATTTATGAAAAAAGTCAAA ]
[+] EMBL FR0057900 [ CAGGAACAAGAGGCTTCAGACTGATGGGGTTCATCTGCTTCAGAAATCGTTCAATAAATTTATGAAAAAAGTCAAAAAAAAAAAAAAAAAAAAACCTGGGGGGGGGCCCGGACCCCAATTTTTGGCCCCTTTAGGGGGGGTTAAATATCTATGAGAACTGCGTGGTGACCCGCCGCTCACTGTAACCGTAGGACCTACCC]
consensusID : consensus_2692#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 596 fasta sequence
[TCTGCTTGACAAATTACGCTGCAACCTATTGTTCCCGCTTGCTGCTGCCTCGCCGACTGCTTAACGAGTTTGTTCTTGATACAGTGTATGACGGCCACTCTGAGGGGACCGTGGAGGAATTCACTGCGTATACCCTTGATGGTCAGCCAGGGGCTTTTACCTGCTATCTGGACGATGGACTTGCAATAACCATCACAAGCAACACCGTATTTGGTGCCCTAAAAGCAGCTGTGGATGTTGTCCTGTCCATCCCACACAGCACAAAGTGTTTCTCCGGATACGACCCTGTAGACAAAGATTTTATCTCCGAGGCCCATCACAAACACATCCTGGGTATCCACGTGACCGAGTACATGAGCTACCTGATGAAGGATGACGACGACACGTACAAAAAGCAATTCTCCCGCTTCATCAAGAGTGGAATAACTCCTGATATGATTGAAGAAATGTACAAGAAGGCTCATGCCTCCATTCGTGAGAACCCAGTCCACGAAAAGAAGCCTCCCTCACAATTCAAGAAGAAAAGGTGGAACCGTGTCAAGCTTTCTCTGTCCCAGAAGAAAGACCGTGTTGCCCAAAAGAAAGCCAGCTTCCTC]
[+] EMBL CA845331 [TCTGCTTGACAAATTACGCTGCAACCTATTGTTCCCGCTTGCTGCTGCCTCGCCGACTGCTTAACGAGTTTGTTCTTGATACAGTGTATGACGGCCACTCTGAGGGGACCGTGGAGGAATTCACTGCGTATACCCTTGATGGTCAGCCAGGGGCTTTTACCTGCTATCTGGACGATGGACTTGCAATAACCATCACAAGCAACACCGTATTTGGTGCCCTAAAAGCAGCTGTGGATGTTGTCCTGTCCATCCCACACAGCACAAAGTGTTTCTCCGGATACGACCCTGTAGACAAAGATTTTATCTCCGAGGCCCATCACAAACACATCCTGGGTATCCACGTGACCGAGTACATGAGCTACCTGATGAAGGATGACGACGACACGTACAAAAAGCAATTCTCCCGCTTCATCAAGAGTGGAATAACTCCTGATATGATTGAAGAAATGTACAAGAAGGCTCATGCCTCCATTCGTGAGAACCCAGTCCACGAAAAGAAGCCTCCCTCACAATTCAAGAAGAAAAGGTGGAACCGTGTCAAGCTTTCTCTGTCCCAGAAGAAAGACCGTGTTGCCCAAAAGAAAGCCAGCTTCCTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2692#0 TTGGCTCCGGGCTCCTTCTTAAGGAGACAAAAAGACTGCAAGATGGGTTTTGTGAAAGTG 60
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GTGAAGAACAAGGCCTACTTCAAGAGGTACCAGGTCAAATTCAGGAGGAGGAGAGAGGGA 120
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 AAGACTGACTACTTTGCTCGCAAGCGCCTTGTCGTACAGGATAAGAACAAGTACAACACA 180
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 CCCAAGTACCGGATGATTGTCCGTTTCTCCAACCGGGACATCGTCTGCCAGATTGCCTAT 240
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GCCAAGATCGAGGGTGACATGATCGTGTGTGCGGCCTATTCACACGAGCTGCCAAAATAC 300
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GGCGTCTCCGTGGGCTTGACAAATTACGCAGCAGCCTATTGCACCGGTTTGCTGCTGGCT 360
consensus_2692#1 ----------TCTGCTTGACAAATTACGCTGCAACCTATTGTTCCCGCTTGCTGCTGCCT 50
* **************** *** ******* ** * ********* **
consensus_2692#0 CGCCGACTGCTGAACAAGTTTGGCCTGGATAAGGTGTATGAAGGCCAGGTTGAGGTGACC 420
consensus_2692#1 CGCCGACTGCTTAACGAGTTTGTTCTTGATACAGTGTATGACGGCCACTCTGAGGGGACC 110
*********** *** ****** ** **** ******** ***** ***** ****
consensus_2692#0 GGTGAGGAATTCAATGTGGAGAGCATTGATGGTCAGCCAGGTGCTTTTACCTGCTATCTG 480
consensus_2692#1 GTGGAGGAATTCACTGCGTATACCCTTGATGGTCAGCCAGGGGCTTTTACCTGCTATCTG 170
* ********** ** * * * * **************** ******************
consensus_2692#0 GACGCTGGACTTGCAAGAACCACCACAGGCAACAAAGTATTTGGTGCAGTTAAGGGAGCT 540
consensus_2692#1 GACGATGGACTTGCAATAACCATCACAAGCAACACCGTATTTGGTGCCCTAAAAGCAGCT 230
**** *********** ***** **** ****** *********** * ** * ****
consensus_2692#0 GTGGATGGAGGCCTGTCCATCCCACACAGCACAAAGCGTTTCCCCGGATACGACCCTGAG 600
consensus_2692#1 GTGGATGTTGTCCTGTCCATCCCACACAGCACAAAGTGTTTCTCCGGATACGACCCTGTA 290
******* * ************************* ***** ***************
consensus_2692#0 AGCAAGGAGTTTAACGCCGAGGCCCATCGCAAACACATCATGGGTATCAACGTGTCCGAG 660
consensus_2692#1 GACAAAGATTTTATCTCCGAGGCCCATCACAAACACATCCTGGGTATCCACGTGACCGAG 350
*** ** **** * ************ ********** ******** ***** *****
consensus_2692#0 TACATGAGCTACCTGATGGAGGAGGACGAGGACACGTACAAAAAGCAATTCTCCCGCTTC 720
consensus_2692#1 TACATGAGCTACCTGATGAAGGATGACGACGACACGTACAAAAAGCAATTCTCCCGCTTC 410
****************** **** ***** ******************************
consensus_2692#0 ATCAAGAATGGAGTAACTCCTGATATGATTGAAGAAATGTACAAAAAGGCTCATGCCTCC 780
consensus_2692#1 ATCAAGAGTGGAATAACTCCTGATATGATTGAAGAAATGTACAAGAAGGCTCATGCCTCC 470
******* **** ******************************* ***************
consensus_2692#0 ATTCGTGAGAACCCAGTCCACGAAAAGAAGCCTCCCAAAGAAGTCAAGAAGAAAAGGTGG 840
consensus_2692#1 ATTCGTGAGAACCCAGTCCACGAAAAGAAGCCTCCCTCACAATTCAAGAAGAAAAGGTGG 530
************************************ * ** *****************
consensus_2692#0 AACCGTGCCAAGCTTTCTCTGGCCCAGAGGAAAGACCGTGTTGCCCAGAAGAAAGCCAGC 900
consensus_2692#1 AACCGTGTCAAGCTTTCTCTGTCCCAGAAGAAAGACCGTGTTGCCCAAAAGAAAGCCAGC 590
******* ************* ****** ****************** ************
consensus_2692#0 TTCCTCCGGGCTCAGGAACAAGAGGCTTCAGACTGATGTGGTTCATCTGCTTCAGAAATC 960
consensus_2692#1 TTCCTC------------------------------------------------------ 596
******
consensus_2692#0 GTTCAATAAATTTATGAAAAAAGTCAAAAAAAAAAAAAAAAAAAAACCTGGGGGGGGGCC 1020
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 CGGACCCCAATTTTTGGCCCCTTTAGGGGGGGTTAAATATCTATGAGAACTGCGTGGTGA 1080
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 CCCGCCGCTCACTGTAACCGTAGGACCTACCC 1112
consensus_2692#1 --------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |