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Takifugu rubripes
cluster # 2708 cluster # 2708       Sequences # 14       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2708#0 length = 1172 sequences # 7  
consensus_2708#1 length = 730 sequences # 3  
consensus_2708#2 length = 703 sequences # 2  
consensus_2708#3 length = 420 sequences # 2  

consensusID : consensus_2708#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1172
fasta sequence
                              [ATCAAGAAAAGGGACTTTGAGATCAGCCTGCTCCTCAGCAAGATTGAGGATGAACAGTCTCTTGGTGCTCAACTTCAGAAGAACATCAAGGAGCTCCAGGCTCGTATTGAGGAGCTGGAGGAGGAGATCGAGGCTGAGAGAGCTGCTCGGGCCAAGGTTGAGAAGCAGAGAGCTGACCTCTCCCGGGAGCTTGAGGAGATCAGTGAGAGGCTTGAAGAAGCTGGTGGAGCAACAGCTGCTCAGATTGAGATGAACAAGAAGCGTGAGGCTGAGTTCCAGAAGATGCGTCGTGATCTTGAAGAGTCTACCCTGCAGCATGAAGCTACTGCAGCAGCCCTCCGTAAGGAGCAGGCTGACAGCGTTGCAGAGTTGGGAGAGCAGATTGACAACCTGCAGCGGGGCAAACAGAAGCTGGAGAAGGAAAAGAGCGAGTACAAGATGGAGATCGATGACCTGTCCAGCAACATGGAGGCTGTTGCTAAATCAAAGGGGAACTTGGAGAAAATGTGCAGAACACTCGAGGATCAGTTGAGTGAACTCAAATCCAAAAACGATGAAAATGTTCGTCAGCTGAATGATATTAATGCACAAAGGGCCAGACTGCAGACAGAGAATGGTGAGTTTGGTCGCCAGCTTGAAGAGAAAGAAGCTC-TTGTTTCCCAGTTGACCAGAGGCAAACAAGCTTTCACTCAACAGATTGAGGAACTTAAGAGACACGTTGAGGAGGAAGTCAAGGCCAAGAACGCCCTGGCCCACGGTGTTCAGTCAGCACGCCATGACTGTGATCTGCTCAGAGAGCAGTACGAGGAGGAGCAGGAAGCCAAGGCTGAACTGCAGAGAGCAATGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGAAGCAAATACGAGACGGATGCTATTCAGCGTACTGAAGAGCTGGAGGAAGCCAAGAAGAAGCTGGCCCAGCGTCTGCAGGACGCTGAGGAATCCATTGAGGCTGTGAACTCAAAGTGTGCCTCTCTGGAGAAGACCAAGCAGAGACTGCAGGGTGAGGTGGAAGGCCTCATGATTGATGTGGAGAGAGCTAATTCTCTGGCTGCCAACCTTGACAAGAAGCAGAGAAATTTTGACAAGGTCCTGGCAGAATGGAAGCAGAAGTACGAGGAGGGTCAGGCAGAGCTGGAAGGAGC]

[+] EMBL FR0064031            [ATCAAGAAAAGGGACTTTGAGATCAGCCTGCTCCTCAGCAAGATTGAGGATGAACAGTCTCTTGGTGCTCAACTTCAGAAGAACATCAAGGAGCTCCAGGCTCGTATTGAGGAGCTGGAGGAGGAGATCGAGGCTGAGAGAGCTGCTCGGGCCAAGGTTGAGAAGCAGAGAGCTGACCTCTCCCGGGAGCTTGAGGAGATCAGTGAGAGGCTTGAAGAAGCTGGTGGAGCAACAGCTGCTCAGATTGAGATGAACAAGAAGCGTGAGGCTGAGTTCCAGAAGATGCGTCGTGATCTTGAAGAGTCTACCCTGCAGCATGAAGCTACTGCAGCAGCCCTCCGTAAGAAGCAGGCTGACAGCGTTGCAGAGTTGGCAGAGCAGATTGACAACCTGCAGCGGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL FR0063514            [                                                                                                                                                                                                                                                                                         GATGCGTCGTGATCTTGAAGAGTCTACCCTGCAGCATGAAGCTACTGCAGCAGCCCTCCGTAAGGAGCAGGCTGACAGCGTTGCAGAGTTGGGAGAGCAGATTGACAACCTGCAGCGTGTCAAACAGAAGCTGGAGAAGGAAAAGAGCGAGTACAAGATGGAGATCGATGACCTGTCCAGCAACATGGAGGCTGTTGCTAAATCAAAGGGGAACTTGGAGAAAATGTGCAGAACACTCGAGGATCAGTTGAGTGAACTCAAATCCAAAAACGATGAAAATGTTCGTCAGCTGAATGATATTAATGCACAAAGGGCCAGACTGCAGACAGAGAATGGTGAGTTTGGGCGCCAGCTTGAAGAGAAAGAAGCTCTTTGTTCCCCAGTTGACCAGAGGCAAACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL FR0063708            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGAGGCTGTTGCTAAATCAAAGGGGAACTTGGAGAAAATGTGCATAACACTCGAGGATCAGGTGAGTGAACTCAAATCCAAAAACGATGAAAATGTTCGCCAGCTGAATGATATTAATGCACAAAGGGCCAGACTGCAGACAGAGAATGGTGAGTTTGGTCGCCAGCTTGAAGAGAAAGAAGCTC TTGTTTCCCAGTTGACCAGAGGCAAACAAGCTTTCACTCAACAGATTGAGGAACTTAAGAGACACGTTGAGGAGGAAGTCAAGGCCAAGAACGCCCTGGCCCACGGTGTTCAGTCAGCACGCCATGACTGTGATCTGCTCAGAGAGCAGTACGAGGAGGAGCAGGAAGCCAAGGCTGAACTGCAGAGAGCAATGTCCAAGGCCAACAGTGAGGTGGCTCAGGGGAGAAGCAAATACGAGACGGATGCTATTCAGCGGACTGAAGAGCTGGAGGAGCCCAAGAAGAAGCTGCCCCAGCGTt                                                                                                                                                                                                                            ]
[+] EMBL FR0063923            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGGGGAACTTGGAGAAAATGTGCAGAACACTCGAGGATCAGTTGAGTGAACTCAAATCCAAAAACGATGAAAATGTTCGTCAGCTGAATGATATTAATGCACAAAGGG CAGACTGCAGACAGAGAATGGTGAGTTTGGTCGCCAGCTTGAAGAGAAAGAAGCTC TTGTTTCCCAGTTGACCAGAGGCAAACAAGCTTTCACTCAACAGATTGAGGAACTTAAGAGACACGTTGAGGAGGAAG CAAGGCCAAGAACGCCCTGGCCCACGGTGTTCAGTCAGCACGCCATGACTGTGAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL FR0064130            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGAATGGTGAGTTTGGTCGCCANNNNCAAGAGAAAGAAGCTC TTGTTTCCCAGCCGACCAGAGGCAAACAAGCTTTCACTC NCAGA TGAGGAACTTAAGAGACACGTTGAGGAGGAAGTCAAGGCCAAGAACGCCCTGGCCCACGGTGTTCAGTCAGCACGCCATGACTGTGATCTGCTCAGAGAGCAGTACGAGGAGGAGCAGGAAGCCAAGGCTGAACTGCAGAGAGCAATGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGAAGC AATACGAGACGGATGCTATTCAGCGTACTGAAGAGCTGGAGGAAGCCAAGAAGAAGCTGGCCCAG                                                                                                                                                                                                                                ]
[+] EMBL BU804698             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTGTTTCCCAGTTGACCAGAGGCAAACAAGCTTTCACTCAACAGATTGAGGAACTTAAGAGACACGTTGAGGAGGAAGTCAAGGCCAAGAACGCCCTGGCCCACGGTGTTCAGTCAGCACGCCATGACTGTGATCTGCTCAGAGAGCAGTACGAGGAGGAGCAGGAAGCCAATGTCGATCCGTTGAGAGCAATGTCCAAGGCCAACAGTGAGGTGGTTCAGTGGAGAAGCAAATACGAGACGGATGCTATTCAGCGTACTGAAGAGCTGGAGGAAGCCAAGAAGAAGCTGGCCCAGCGTCTGCAGGACGCTGAGGAATCCATTGAGGCTGTGAACTCAAAGTGTGCCTCTCTGGAGAAGACCAAGCAAAGACTGCAGGGTGAGGTGGAAGACCTCATGATTGATGTGGAGAGAGCTAATTCTCTGGCTGCCAACCTTGACAAGAAGCAGAGA                                                                    ]
[+] EMBL FR0064012            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTACGAGGAGGAGCAGGAAGCCAAGGCTGAACTGCAGAGAGCAATGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGAAGCAAATACGA ACGGATGCTATTCAGCGTACTGAAGAGCTGGAGGAAGCCAAGAAGAAGCTGGCCCAGCGTCTGCAGGACGCTGAGGAATCCATTGAGGCTGTGAACTCAAAGTGTGCCTCTCTGGAGAAGACCAAGCAGAGACTGCAGGGTGAGGTGGAAGGCCTCATGATTGATGTGGAGAGAGCTAATTCTCTGGCTGCCAACCTTGACAAGAAGCAGAGAAATTTTGACAAGGTCCTGGCAGAATGGAAGCAGAAGTACGAGGAGGGTCAGGCAGAGCTGGAAGGAGC]


>consensus_2708#0 ATCAAGAAAAGGGACTTTGAGATCAGCCTGCTCCTCAGCAAGATTGAGGATGAACAGTCT CTTGGTGCTCAACTTCAGAAGAACATCAAGGAGCTCCAGGCTCGTATTGAGGAGCTGGAG GAGGAGATCGAGGCTGAGAGAGCTGCTCGGGCCAAGGTTGAGAAGCAGAGAGCTGACCTC TCCCGGGAGCTTGAGGAGATCAGTGAGAGGCTTGAAGAAGCTGGTGGAGCAACAGCTGCT CAGATTGAGATGAACAAGAAGCGTGAGGCTGAGTTCCAGAAGATGCGTCGTGATCTTGAA GAGTCTACCCTGCAGCATGAAGCTACTGCAGCAGCCCTCCGTAAGGAGCAGGCTGACAGC GTTGCAGAGTTGGGAGAGCAGATTGACAACCTGCAGCGGGGCAAACAGAAGCTGGAGAAG GAAAAGAGCGAGTACAAGATGGAGATCGATGACCTGTCCAGCAACATGGAGGCTGTTGCT AAATCAAAGGGGAACTTGGAGAAAATGTGCAGAACACTCGAGGATCAGTTGAGTGAACTC AAATCCAAAAACGATGAAAATGTTCGTCAGCTGAATGATATTAATGCACAAAGGGCCAGA CTGCAGACAGAGAATGGTGAGTTTGGTCGCCAGCTTGAAGAGAAAGAAGCTCTTGTTTCC CAGTTGACCAGAGGCAAACAAGCTTTCACTCAACAGATTGAGGAACTTAAGAGACACGTT GAGGAGGAAGTCAAGGCCAAGAACGCCCTGGCCCACGGTGTTCAGTCAGCACGCCATGAC TGTGATCTGCTCAGAGAGCAGTACGAGGAGGAGCAGGAAGCCAAGGCTGAACTGCAGAGA GCAATGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGAAGCAAATACGAGACGGATGCT ATTCAGCGTACTGAAGAGCTGGAGGAAGCCAAGAAGAAGCTGGCCCAGCGTCTGCAGGAC GCTGAGGAATCCATTGAGGCTGTGAACTCAAAGTGTGCCTCTCTGGAGAAGACCAAGCAG AGACTGCAGGGTGAGGTGGAAGGCCTCATGATTGATGTGGAGAGAGCTAATTCTCTGGCT GCCAACCTTGACAAGAAGCAGAGAAATTTTGACAAGGTCCTGGCAGAATGGAAGCAGAAG TACGAGGAGGGTCAGGCAGAGCTGGAAGGAGC



consensusID : consensus_2708#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 730
fasta sequence
                              [TGGCAGAATGGAAGCAGAAGTACGAGGAGGGTCAGGCAGAGCTGGAAGGAGCTCAGAAGGAGGCTCGTTCTCTCAGCACTGAACTCTTCAAGATGAAGAACTCTTATGAGGAAGCTCTGGATCATCTGGAAACCATGAAGAGAGAAAACAAGAACCTGCAGCAGGAGATCTCTGACCTGACTGAACAAATTGGTGAGACTGGGGTGCATTCTGGGAACACATAACAAGATGTCGGCGAGCAGGAGGCTGGCCAAGGAACTTGAGGAGATCCGTAAGTCTGGAATGAAAAACTTCAGAAACATTCAAGTTGAGGAATCAAACCTATTGTCATGGCAAGGACTCATCGTCCCTGACAACCCTCCTTATGACAAAGGTGCTTTCAGAATTGAAATAATTTTCCCCACTGAATACCCATTTAAGCCCCCCAAGATCACCTTCAAGACAAAGATTTATCACCCCAACATTGATGAGAAGGGCCAGGTATGTTTGCCCGTGATCAGTGCAGAGAACTGGAAGCCTGCCACCAAAACTGACCAAGTAATTCAGTCCCTCATTGCACTGGTGAATGACCCCCAGCCAGAACATCCCCTGAGGGCAGATTTAGCAGAAGAA-ACTCANAAGACCGTAAAAAATTCTTGAAGAATGCTGAAGAGTTTACAAAGAAACATGGTGAAAAGCGGCCAATGGACTGAGCCCCCGATGAGATCACCTATAAGCCCCATCTCACTCG]

[+] EMBL BU805412             [TGGCAGAATGGAAGCAGAAGTACGAGGAGGGTCAGGCAGAGCTGGAAGGAGCTCAGAAGGAGGCTCGTTCTCTCAGCACTGAACTCTTCAAGATGAAGAACTCTTATGAGGAAGCTCTGGATCATCTGGAAACCATGAAGAGAGAAAACAAGAACCTGCAGCAGGAGATCTCTGACCTGACTGAACAAATTGGTGAGACTGGGGTGCATTCTGGGAACACATAACAAGATGTCGGCGAGCAGGAGGCTGGCCAAGGAACTTGAGGAGATCCGTAAGTCTGGAATGAAAAACTTCAGAAACATTCAAGTTGAGGAATCAAACCTATTGTCATGGCAAGGACTCATCGTCCCTGACAACCCTCCTTATGACAAAGGTGCTTTCAGAATTGAAATAATTTTCCCCACTGAATACCCATTTAAGCCCCCCAAGATCACCTTCAAGACAAAGATTTATCACCCCAACATTGATGAGAAGGGCCAGGTATGTTTGCCCGTGATCAGTGCAGAGAACTGGAAGCCTGCCACCAAAACTGACCAAGTAATTCAGTCCCTCATTGCACTGGTGAATGACCCCCAGCCAGAACATCCCCTGA                                                                                                                                           ]
[+] EMBL FR0061201            [                                                                                                                                                                                                                                                                           ATCCGTAAGTCTGGAATGAAAAACTTCAGAAACATTCAAGTTGAGGAATCAAACCTATTGTCATGGCAAGGACTCATCGTCCCTGACAACCCTCCTTATGACAAAGGTGCTTTCAGAATTGAAATAATTTTCCCCACTGAATACCCATTTAAGCCCCCCAAGATCACCTTCAAGACAAAGATTTATCACCCCAACATTGATGAGAAGGGCCAGGTATGTTTGCCCGTGATCAGTGCAGAGAACTGGAAGCCTGCCACCAAAACTGACCAAGTAATTCAGTCCCTCATTGCACTGGTGAATGACCCCCAGCCAGAACATCCCCTGAGGGCAGATTTAGCAGAAGAATACTCANAAGACCGTAAAAAATTCTTGAAGAATGCTGAAGAGTTTACAAAGAAACATGGTGAAAAGCGGCCAATGGACTGAGCCCCCGATGAGATCACCTATAAGCCCCATCTCACTCG]
[+] EMBL FR0061226            [                                                                                                                                                                                                                                                                                                                    TGAGGAATCGGACCTAGTGTCATGGCAAGGACTCATCGTCCCTGACAACCCTCCTTATGACAAAGGTGCTTTCAGAATTGAAATAATTTTCCCCACTGAATACCCATTTAAGCCCCCCAAGATCACCTTCAAGACAAAGATTTATCACCCCAACATTGATGAGAAGGGCCAGGTATGTTTGCCCGTGATCAGTGCAGAGAACTGGAAGCCTGCCACCAAAACTGACCAAGTAATTCAGTCCCTCATTGCACTGGTGAATGACCCCCAGCCAGAACATCCCCTGAGGGCAGATTTAGCAGAAGAA ACTCAAAAGACCGTAAAAAATTCTTGAA AATGCTGAAGAGTTTACAAAGAAACATGG                                                            ]


>consensus_2708#1 TGGCAGAATGGAAGCAGAAGTACGAGGAGGGTCAGGCAGAGCTGGAAGGAGCTCAGAAGG AGGCTCGTTCTCTCAGCACTGAACTCTTCAAGATGAAGAACTCTTATGAGGAAGCTCTGG ATCATCTGGAAACCATGAAGAGAGAAAACAAGAACCTGCAGCAGGAGATCTCTGACCTGA CTGAACAAATTGGTGAGACTGGGGTGCATTCTGGGAACACATAACAAGATGTCGGCGAGC AGGAGGCTGGCCAAGGAACTTGAGGAGATCCGTAAGTCTGGAATGAAAAACTTCAGAAAC ATTCAAGTTGAGGAATCAAACCTATTGTCATGGCAAGGACTCATCGTCCCTGACAACCCT CCTTATGACAAAGGTGCTTTCAGAATTGAAATAATTTTCCCCACTGAATACCCATTTAAG CCCCCCAAGATCACCTTCAAGACAAAGATTTATCACCCCAACATTGATGAGAAGGGCCAG GTATGTTTGCCCGTGATCAGTGCAGAGAACTGGAAGCCTGCCACCAAAACTGACCAAGTA ATTCAGTCCCTCATTGCACTGGTGAATGACCCCCAGCCAGAACATCCCCTGAGGGCAGAT TTAGCAGAAGAAACTCANAAGACCGTAAAAAATTCTTGAAGAATGCTGAAGAGTTTACAA AGAAACATGGTGAAAAGCGGCCAATGGACTGAGCCCCCGATGAGATCACCTATAAGCCCC ATCTCACTCG



consensusID : consensus_2708#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 703
fasta sequence
                              [AAGAAAGAACTGGAGGAGAAAATGGTTTCCCTTCTGCAGGAAAAGAACGACCTGCAGGGGCAAGTCGCATCAGAATTTGATAACCTTTCTGATGCTGAGGAGAGATGTGAGGGACTCATCAAGAGTAAGATCCAGCTGGAGGCCAAACTCAAAGAGACAACTGAGAGATTGGAAGATGAAGAAGAGATCAATGCTGAACTGACAGCCAAGAAGAGGAAGCTGGAGGATGAATGCTCTGAGCTAAAGAAAGACATCGATGACCTGGAGCTCACCTTGGCTAAAGTGGAGAAGGAGAAACATGCTACAGAAAACAAGGTGAAAAACCTGACAGAGGAGATGGCATCTCAAGATGAGTCTATTGCCAAGTTAACCAAGGAGAAGAAAGCTCTCCAGGAGAGCCACCAGCANACACTGGATGACCTCCAGGCAGAGGAAGACAAAGTCAACACTCTGACCAAGGCCAAGACAAAGCTGGAACAGCAAGTGGATGATCTTGAGGGATCACTGGAGCAAGAGAAGAAGCTCCGCATGGACCTTGAGAGAGCCAAGAGAAAACTGGAGGGAGACCTGAAACTGGCCCAAGAGTCCATAATGGATCTGGAGAATGAGAAACAGCAATCTGATGAGAAAATCAAGAAAAGGGACTTTGAGATCAGCCAGCTCCTCAGCAAGATTGAGGATGAACAGTCTCTTGGTGCTCAAC]

[+] EMBL FR0063500            [AAGAAAGAACTGGAGGAGAAAATGGTTTCCCTTCTGCAGGAAAAGAACGACCTGCAGGGGCAAGTCGCATCAGAATTTGATAACCTTTCTGATGCTGAGGAGAGATGTGAGGGACTCATCAAGAGTAAGATCCAGCTGGAGGCCAAACTCAAAGAGACAACTGAGAGATTGGAAGATGAAGAAGAGATCAATGCTGAACTGACAGCCAAGAAGAGGAAGCTGGAGGATGAATGCTCTGAGCTAAAGAAAGACATCGATGACCTGGAGCTCACCTTGGCTAAAGTGGAGAAGGAGAAACATGCTACAGAAAACAAGGTGAAAAACCTGACAGAGGAGATGGCATCTCAAGATGAGTCTATTGCCAAGTTAACCAAGGAGAAGAAAGCTCTCCAGGAGAGCCACCAGCANACACTGGATGACCTCCAGGCAGAGGAAGACAAAGTCAACACTCTGACCAA                                                                                                                                                                                                                                                     ]
[+] EMBL FR0064040            [                                                                                                                                                                                                                                                                                             GAGAAGGAGAAACATGCTACAGAAAACAAGGTGAAAAACCTGACAGAGGAGATGGCATCTCAAGATGAGTCTATTGCCAAGTTAACCAAGGAGAAGAAAGCTCTCCAGGAGAGCCACCAGCAAACACTGGATGACCTCCAGGCAGAGGAAGACAAAGTCAACACTCTGACCAAGGCCAAGACAAAGCTGGAACAGCAAGTGGATGATCTTGAGGGATCACTGGAGCAAGAGAAGAAGCTCCGCATGGACCTTGAGAGAGCCAAGAGAAAACTGGAGGGAGACCTGAAACTGGCCCAAGAGTCCATAATGGATCTGGAGAATGAGAAACAGCAATCTGATGAGAAAATCAAGAAAAGGGACTTTGAGATCAGCCAGCTCCTCAGCAAGATTGAGGATGAACAGTCTCTTGGTGCTCAAC]


>consensus_2708#2 AAGAAAGAACTGGAGGAGAAAATGGTTTCCCTTCTGCAGGAAAAGAACGACCTGCAGGGG CAAGTCGCATCAGAATTTGATAACCTTTCTGATGCTGAGGAGAGATGTGAGGGACTCATC AAGAGTAAGATCCAGCTGGAGGCCAAACTCAAAGAGACAACTGAGAGATTGGAAGATGAA GAAGAGATCAATGCTGAACTGACAGCCAAGAAGAGGAAGCTGGAGGATGAATGCTCTGAG CTAAAGAAAGACATCGATGACCTGGAGCTCACCTTGGCTAAAGTGGAGAAGGAGAAACAT GCTACAGAAAACAAGGTGAAAAACCTGACAGAGGAGATGGCATCTCAAGATGAGTCTATT GCCAAGTTAACCAAGGAGAAGAAAGCTCTCCAGGAGAGCCACCAGCANACACTGGATGAC CTCCAGGCAGAGGAAGACAAAGTCAACACTCTGACCAAGGCCAAGACAAAGCTGGAACAG CAAGTGGATGATCTTGAGGGATCACTGGAGCAAGAGAAGAAGCTCCGCATGGACCTTGAG AGAGCCAAGAGAAAACTGGAGGGAGACCTGAAACTGGCCCAAGAGTCCATAATGGATCTG GAGAATGAGAAACAGCAATCTGATGAGAAAATCAAGAAAAGGGACTTTGAGATCAGCCAG CTCCTCAGCAAGATTGAGGATGAACAGTCTCTTGGTGCTCAAC



consensusID : consensus_2708#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 420
fasta sequence
                              [GAGGAAGCTCNNNCCATCTGGAAACCATGAAGAGAGAAAACAAGAACCTGCAGCAGGAGATCTCTGACCTGATAGCAAATTGGTGAGACTGGAAAGAGTATTCATGAGTTGGAGAAGTCCAAGAAAACTGTTGAGACAGAGAAGTCTGAGATCCAGGCGGCACTGGAGGAAGCTGAGGGAACATTAGAGCATGAGGAGGCCAAGATTCTGCGCGTCCAGCTTGAGCTCAATCAGATCAAGGGTGAGGTTGACAGGAAATTGGCAGAGAAGGATGAGGAGATGGAGCAGATAAAGAGGAACAGCCAGAGAGTGATTGACTCCATGCAGAGCACACTTGATGCTGAGGTCANGAGCAGGAGTGATGCCCTGAGAGTCAAGAAGAAGATGGGGGGAGACCTGCGTGAAATGGAGATTCAGCTG]

[+] EMBL FR0064104            [GAGGAAGCTCNNNCCATCTGGAAACCATGAAGAGAGAAAACAAGAACCTGCAGCAGGAGATCTCTGACCTGATAGCAAATTGGTGAGACTGGAAAGAGTATTCATGAGTTGGAGAAGTCCAAGAAAACTGTTGAGACAGAGAAGTCTGAGATCCAGGCGGCACTGGAGGAAGCTGAGGGAACATTAGAGCATGAAGAGGCCAAGATTCTACGCGTCCAGCTTGAGCTCAATCAGATCAAGGGTGAGGTTGACAGGAAATTGGCAGAGAAGGATGAGGAGATGGAGCAGATAAAGAGGAACAGCCAGAGAGTGATTGACTCCATGCAGAGCACACTTGATGCTGAGGTCANGAGCAGAAATGATGCCCTGAGAGTCAAGAAGAAG                                    ]
[+] EMBL FR0057735            [                                                                                                                                                                        GAAGCTGAGGGAACATTAGAGCATGCGGAGGCCAAGATTCTGCGCGTCCAGCTTGAGCTCAATCAGATCAAGGGTGAGGTTGACAGGAAATTGGCAGAGAAGGATGAGGAGATGGAGCAGATAACGAGGAACACCCAGAGAGTGATTGACTCCATGCAGAACACACTTGATGCTGACGTCAGGAGCAGGAGTGATGCCCTGAGAGTCAACAACCAGATGGGGGGAGACCTGCGTGAAATGGAGATTCAGCTG]


>consensus_2708#3 GAGGAAGCTCNNNCCATCTGGAAACCATGAAGAGAGAAAACAAGAACCTGCAGCAGGAGA TCTCTGACCTGATAGCAAATTGGTGAGACTGGAAAGAGTATTCATGAGTTGGAGAAGTCC AAGAAAACTGTTGAGACAGAGAAGTCTGAGATCCAGGCGGCACTGGAGGAAGCTGAGGGA ACATTAGAGCATGAGGAGGCCAAGATTCTGCGCGTCCAGCTTGAGCTCAATCAGATCAAG GGTGAGGTTGACAGGAAATTGGCAGAGAAGGATGAGGAGATGGAGCAGATAAAGAGGAAC AGCCAGAGAGTGATTGACTCCATGCAGAGCACACTTGATGCTGAGGTCANGAGCAGGAGT GATGCCCTGAGAGTCAAGAAGAAGATGGGGGGAGACCTGCGTGAAATGGAGATTCAGCTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2708#1      ------------------------------------------------------------
consensus_2708#3      ------------------------------------------------------------
consensus_2708#2      ------------------------------------------------------------
consensus_2708#0      ATCAAGAAAAGGGACTTTGAGATCAGCCTGCTCCTCAGCAAGATTGAGGATGAACAGTCT 60
                                                                                  

consensus_2708#1      ----------------------------------------------TGGCAGAATGGAAG 14
consensus_2708#3      ------------------------------------------------------------
consensus_2708#2      ---------------------------------------------AAGAAAGAACTGGAG 15
consensus_2708#0      CTTGGTGCTCAACTTCAGAAGAACATCAAGGAGCTCCAGGCTCGTATTGAGGAGCTGGAG 120
                                                                                  

consensus_2708#1      CAGAAGTACGAGGAGGGTCAGGCAGAGCTGGAAGGAGCTCAGAAGGAGGCTCGTTCTCTC 74
consensus_2708#3      ------------------------------------------------------------
consensus_2708#2      GAGAAAATGGTTTCCCTTCTGCAGGAAAAGAACGACCTGCAGGGGCAAGTCGCATCAGAA 75
consensus_2708#0      GAGGAGATCGAGGCTGAGAGAGCTGCTCGGGCCAAGGTTGAGAAGCAGAGAGCTGACCTC 180
                                                                                  

consensus_2708#1      AGCACTGAACTCTTCAAGATGAAGAACTCTTATGAGGAAGCTCTGGA----TCATCTG-- 128
consensus_2708#3      ---------------------------------GAGGAAGCTCNNN-----CCATCTG-- 20
consensus_2708#2      TTTGATAACCTTTCTGATGCTGAGGAGAGATGTGAGGGACTCATCA------AGAGTA-- 127
consensus_2708#0      TCCCGGGAGCTTGAGGAGATCAGTGAGAGGCTTGAAGAAGCTGGTGGAGCAACAGCTGCT 240
                                                       ** * *                 *   

consensus_2708#1      -GAAACCATGAAGAGAGAAAACAAGAACCTG-----CAGCAGGAGATCTCTGACCTGACT 182
consensus_2708#3      -GAAACCATGAAGAGAGAAAACAAGAACCTG-----CAGCAGGAGATCTCTGACCTGAT- 73
consensus_2708#2      -AGATCCAGCTGGAGGCCAAACTCAAAGAGA-----CAACTGAGAGATTGGAAGATGAA- 180
consensus_2708#0      CAGATTGAGATGAACAAGAAGCGTGAGGCTGAGTTCCAGAAGATGCGTCGTGATCTTGAA 300
                         *   *     *    ** *   *          **   *          *  *    

consensus_2708#1      GAACAAATT----GGTG--AGACTG--G-GGTGCATTCTGGGAACACATAACAAGATGTC 233
consensus_2708#3      -AGCAAATT----GGTG--AGACTG--G-AAAGAGTATTCATGAGTTG----GAGAAGTC 119
consensus_2708#2      GAAGAGATC----AATGCTGAACTG--ACAGCCAAGAAGAGGAAGCTGGAGGATGAATGC 234
consensus_2708#0      GAGTCTACCCTGCAGCATGAAGCTACTGCAGCAGCCCTCCGTAAGGAGCAGGCTGACAGC 360
                       *    *               **                   *          **   *

consensus_2708#1      GGCGAGCAGGAGGCTG-G-CCAAGGAACTTGAGGAGATCCGTAAGTCTGGAATGAAAAAC 291
consensus_2708#3      --CAAGAAAACTGTTGAG-ACAGAGAAGTCTGAGATCCAGGCGGCACTGGA---GGAAGC 173
consensus_2708#2      TCTGAGCTAAAGA--AAG-ACATCGATGACCTGGAGCTCACCTTGGCTAAAGTGGAGAAG 291
consensus_2708#0      GTTGCAGAGTTGGGAGAGCAGATTGACAACCTGCAGCGGGGCAAACAGAAGCTGGAGAAG 420
                                       *   *  **        *                      *  

consensus_2708#1      TTCAGAAAC-ATTCAAGT-TGAGGAATCAAACCTATTGTCATGGCAAGGACTCATCGTCC 349
consensus_2708#3      TGAGGGAAC-ATTAGAGCATGAGGAGGCCAAGATTCTG-CGCGTCCAG--CTTGAGCTCA 229
consensus_2708#2      GAGAAACAT-GCTACAGA-AAACAAGGTGAAAAACCTGACA-GAGGAGATGGCATCTCAA 348
consensus_2708#0      GAAAAGAGCGAGTACAAG--ATGGAGATCGATGACCTGTCC-AGCAACATGGAGGCTGTT 477
                                  *  *        *     *     ** *      *             

consensus_2708#1      CTGACAACCCTCCTTATGACAAA--GGTGCTTTCAGAATTGAAATAATTTTCCCCACTGA 407
consensus_2708#3      ATCAGATCAAGGGTGAGGTTGAC--AGGAAATTGGCA---GAGAAGGATGAGGAGATGGA 284
consensus_2708#2      GATGAGTCTATTGCCAAGTTAACCAAGGAGAAGAAAGCTCTCCAGGAGAGCCACCAGCAN 408
consensus_2708#0      GCTAAATCAAAGGGGAACTTGGA-GAAAATGTGCAGAACACTCGAGGATCAGTTGAGTGA 536
                             *       *                                       *    

consensus_2708#1      ATACCCATTTAAGCCCCCCAAGATCAC-CTTCAAGACAAAGATTTA--TCACCCCAACAT 464
consensus_2708#3      GCAGATAAAGAGGAACAGCCAGAGAGT-GATTGACTCCATGCAGAG--CACACTTGATGC 341
consensus_2708#2      ACACTGGATGACCTCCAGGCAGAGGAA-GACAAAGTCAACACTCTGACCAAGGCCAAGAC 467
consensus_2708#0      ACTCAAATCCAAAAACGATGAAAATGTTCGTCAGCTGAATGATATTAATGCACAAAGGGC 596
                                *    *    * *               *                     

consensus_2708#1      TGATGAGAAGGGCCAGGTATGTTTGCCCGTGATCAGTGCAGAGAACTGGAAGCCTG-CCA 523
consensus_2708#3      TGAGGTCANGAGC-AGGAGTGATGCCCTGAGAGTCAAGAAGAAGATGGGGGGAGAC-CTG 399
consensus_2708#2      AAAGCTGGAACAGCAAGTGGATGATCTTGAGGGATCACTGGAGCAAGAGAAGAAGCTCCG 527
consensus_2708#0      CAGACTGCAGACAGAGAATGGTGAGTTTGGTCGCCAGCTTGAAGA--GAAAGAAGCTCTT 654
                                    *             *           **  *      *     *  

consensus_2708#1      CCAAAACTGACCAAGTAATTCAGTCCCTCATTGCACTGGTGAATGACCCCCAGCCAGAAC 583
consensus_2708#3      CGTGAAATG-----GAGATTCAGCTG---------------------------------- 420
consensus_2708#2      CATGGACCT--TGAGAGAGCCAAGAGAAAACTGGAGGGAGACCTGAAACTGGCCCAAGAG 585
consensus_2708#0      GTTTCCCAGTTGACCAGAGGCAAACAAGCTTTCACTCAACAGATTGAGGAACTTAAGAGA 714
                                       *  **                                      

consensus_2708#1      ATCCCCTGAGGGCAGATTTAGCAGAAGAAACTCANAAGACCGTAAAAAATTCTTGAAGAA 643
consensus_2708#3      ------------------------------------------------------------
consensus_2708#2      TCCATAATGGATCTGGAGAATGAGAAACAGCAATCTGATGAGAAAATCAAGAAAAGGGAC 645
consensus_2708#0      CACGTTGAGGAGGAAGTCAAGGCCAAGAACGCCCTGGCCCACGGTGTTCAGTCAGCACGC 774
                                                                                  

consensus_2708#1      TGCTGAAG-AGTTTACAAAGAAACATGGTGAAAAGCGGCCAATGGACTGAGCCCCCGATG 702
consensus_2708#3      ------------------------------------------------------------
consensus_2708#2      TTTGAGATCAGCCAGCTCCTCAGCAAGATTGAGGATGAACAGTCTCTTGGTGCTCAAC-- 703
consensus_2708#0      CATGACTGTGATCTGCTCAGAGAGCAGTACGAGGAGGAGCAGGAAGCCAAGGCTGAACTG 834
                                                                                  

consensus_2708#1      AGATCACCTATAAGCCCCATCTCACTCG-------------------------------- 730
consensus_2708#3      ------------------------------------------------------------
consensus_2708#2      ------------------------------------------------------------
consensus_2708#0      CAGAGAGCAATGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGAAGCAAATACGAGACG 894
                                                                                  

consensus_2708#1      ------------------------------------------------------------
consensus_2708#3      ------------------------------------------------------------
consensus_2708#2      ------------------------------------------------------------
consensus_2708#0      GATGCTATTCAGCGTACTGAAGAGCTGGAGGAAGCCAAGAAGAAGCTGGCCCAGCGTCTG 954
                                                                                  

consensus_2708#1      ------------------------------------------------------------
consensus_2708#3      ------------------------------------------------------------
consensus_2708#2      ------------------------------------------------------------
consensus_2708#0      CAGGACGCTGAGGAATCCATTGAGGCTGTGAACTCAAAGTGTGCCTCTCTGGAGAAGACC 1014
                                                                                  

consensus_2708#1      ------------------------------------------------------------
consensus_2708#3      ------------------------------------------------------------
consensus_2708#2      ------------------------------------------------------------
consensus_2708#0      AAGCAGAGACTGCAGGGTGAGGTGGAAGGCCTCATGATTGATGTGGAGAGAGCTAATTCT 1074
                                                                                  

consensus_2708#1      ------------------------------------------------------------
consensus_2708#3      ------------------------------------------------------------
consensus_2708#2      ------------------------------------------------------------
consensus_2708#0      CTGGCTGCCAACCTTGACAAGAAGCAGAGAAATTTTGACAAGGTCCTGGCAGAATGGAAG 1134
                                                                                  

consensus_2708#1      --------------------------------------
consensus_2708#3      --------------------------------------
consensus_2708#2      --------------------------------------
consensus_2708#0      CAGAAGTACGAGGAGGGTCAGGCAGAGCTGGAAGGAGC 1172
                                                            




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)