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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2730#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 755 fasta sequence
[ATCAGTAAAGACTGAAGACCGACAAGGATGGACGAGGACAGAGCACCTTCCACAGTGCCCAGCTGGGTGTCCCTGAAGAGTGACCGGTCCAAAAGTGGAATAATAAACTTCAGAAGTTCAGACCAAATCTATCAGAAACGGTCTGCTTCCATTGGAGATTCCTCCTGTCCCGAGGGTGAAAACAAACGGAGAACTGAACTGCAGACCGCCGACCTGAACAACAGCGTCTCACAGGGTGGTGAACTGCAGGAGGTGATAGAAGGTCATAAGATCAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGAGAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCAGTCTGGACTGGGCAGAAGGTTTGGAGAACCAAGACATCAGTCTGGTGCTTCCGCTCTCATGCAGGGAGCTGAACTTGATCAGAGATGAGCAGCACAGTCTTCTCTCACTGCTTCATGTTTTCCATCCAACATTACAGAAGATCAGAGCAGAAGATCTGACTGTCTGGAAACTTCTGTTCATCTTTGATGG]
[+] EMBL CA588270 [ATCAGTAAAGACTGAAGACCGACAAGGATGGACGAGGACAGAGCACCTTCCACAGTGCCCAGCTGGGTGTCCCTGAAGAGTGACCGGTCCAAAAGTGGAATAATAAACTTCAGAAGTTCAGACCAAATCTATCAGAAACGGTCTGCTTCCATTGGAGATTCCTCCTGTCCCGAGGGTGAAAACAAACGGAGAACTGAACTGCAGACCGCCGACCTGAACAACAGCGTCTCACAGGGTGGTGAACTGCAGGAGGTGATAGAAGGTCATAAGATCAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGAGAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCAGTCTGGACTGGGCAGAAGGTTTGGAGAACCAAGACATCAGTCTGGTGCTTCCGCTCTCATGCAGGGAGCTGAACTTGATCAGAGATGAGCAGCACAGTCTTCTCTCACTGCTTCATGTTTTCCATCCAACATTACAGAAGATCAGAGCAGAAGATCTGACTGTCTGGAAACTTCTGTTCATCTTTGATGG]
consensusID : consensus_2730#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 680 fasta sequence
[ACTGAAGACCGACAAGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCCTGAAGAGTGACCGGTCCAAAGATGGGAAGGAAGACTGAAGA----CCGAC--AAGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCCTGAAGAGTGACCGGTCCAAAGGTGGACTAATAAACTTCAGAAGTTCAGAGAAAATTGAGAGGGGGGAGCACATCCTATCAAACTGGGACCAGTCAGCTCCACCAGGAGAGTCCTCTTGTTCACAATCTGGAAGCAGATCTGGAGATGCTGAAATGAAGCCCAAACAAAGAAGTGATCTGCAGGAGGTGATAGAAGGTCATAAGATGAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGAGAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCAGTCTGGACTGGGCAGAAGGTTTG]
[+] EMBL CA591156 [ACTGAAGACCGACAAGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCCTGAAGAGTGACCGGTCCAAAGATGGAATGATAGACTTCAGAAGTTCAGACAAAATGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCTTGAAGAGTGACTGGTCCAAAGATGGAATGATAGACTTCAGAAGTTCAGACAAATTTGAGAGGGGGGAGCACATCCTATCAAACTGGGACCAGTCAGCTCCACCAGGAGAGTCCTCTTGTTCACAATCTGGAAGCAGATCTGGAGATGCTGAAATGAAGCCCAAACAAAGAAGTGATCTGCAGGAGGTGATAGAAGGTCATAAGATCAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGAGAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTT ]
[+] EMBL CA591408 [ aGCAGGAAGACTGAAGA CCGAC AAGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGGGTGTCCCTGAAGAGTGACCGGTCCAAAGGTGTACCAATAACCTTCAGAAGTTCAGAGGAAATTGAGAGGGGGGAGCACATCCTATCAAACTGGGACCAGTCAGCTCCACCAGGAGAGTCCTCTTGTTCACAATCTGGAAGCAGATCTGGAGATGCTGAAATGAAGCCCAAACAAAGAAGTGATCTGCAGGAGGTGATAGAAGGTCATAAGATGAGTCTGAAGAGAAGATATAAACATGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACGCAACATGAGGTGAGACAGCTTGAGAGAACCTCCCAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCAGT ]
[+] EMBL CA589074 [ ACTGAAGA CCGAC AAGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCCTGAAGAGTGACCGGTCCAAAGATGCACTAATAACCTTTAGAAGTTCAGACAAAATTGAGAGGGGGGAGCACATCCTATCAAACTGGGACCAGTCAGCTCCACCAGGAGAGTCCTCTTGTTCACAATCTGGAAGCAGATCTGGAGATGCTGAAATGAAGCCCAAACAAAGAAGTGATCTGCAGGAGGTGATAGAAGGTCATAAGTTCAGTCTGAAGGGAAGATGTGAACATGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGATAACCTCCAAGAAGAACATTCAGGACACTCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCA ]
[+] EMBL CA591357 [ ttctcaAAGG CATAA TCTGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCAGGGTGTCCCTGAAGAGTGACATGTCCAAAGCTGAAATATTAAACTTCAGAAGTTCAGATAAAATTGAGAGGGGGGAGCACATCCTATCAAACTGGGACCAGGCAGCTCCACCAGGAGAGTCCTCTTGTTCACAACCTGGAAGCAGATCTGGAGATGCTGAAATGAAGCCCAAACAAAGAGGTGATCTGCAGGGGGTGATAGAAGGTCATAAGATGAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGAGAACCTCCAAGAAGAACATCCAGGACACCCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCA ]
[+] EMBL CA590867 [ AGA CCGAC AAGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCAATGAAGAGTGACCACTCCAAAGGAGGGGAAATAAACTTCAGAAGTTCAGACAAAATTGAGAGGGGGGAGCACATCCTATCAAACTGGGACCAGTCAGCTCCACCAGGAGAGTCCTCATGTTCACAATCTGGAAGCAGATCTGGAGATGCTGAAATGAAGCCCAAACAAAGAAGTGATCTGCAGGAGGTGATAGAAGGTCATAAGATGAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGAGAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGAGAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCAGTCTGGACTGGG ]
[+] EMBL BU806016 [ GGACGAGGACAGAGCCGAGTCCACAGTGCCCAGCTGTGTGTCCCTGAAGAGTGACCGGTCCAAAGATAGAGGAATAAACTTCAGAAGTTCAGAGGAAATTGAGAGGGGGGAGCACATCCTATCAAACTGGGACCAGTCAGCTCCACCAGGAGAGTCCTCTTGTTCACGATCTGGAAGCAGATCTGGAGATGCTGAAATGAAGCCCAAACAAAGAGGTGATCTGTTGGAGGTGATAGAAGGTCATAAGATCAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGATAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCAGTCTGGACTGGGCAGAAGGTTTG]
[+] EMBL FR0058470 [ GTGTCCCTGAAGAGTGACCAGTCCAAAGGTGGACCAATAAACTTCAGAAGTTCAGAGGAAATTGAGAGGGGGGAGCACATCCTATCAAACTGGGACCAGGCAGCTCCACCAGGAGAGTCCTCTTGTTCACAATCTGGAAGCAGATCTGGAGATGCTGAAATGAAGCTCAAACAAAGAAGTGAACTGCAGGAGGTGATAGAAGGTCATAAGATGAGTCTGAAGAGCAGATGTGAACATGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGAGAACCTCCAAGAAGAACAT ]
consensusID : consensus_2730#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 583 fasta sequence
[AGCAGGAAGACGGAAGACCGACAATATTCAGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGGGTGTCCCTGAAGAGTGACCAGTCCAAAGGCGAACCTATAAACTTTGGTATCGGACCTCAAGGCTCACCTTTAAAGTATCAGAAACGGTCTGCTTCCATTGGAGATTCCTCCTGTCCCGAGGGTGAAAAGAAACGGAGAACTGAACTGCAGACCGCCGACCTGAACAACAGCGTCTCACAGGGTGGTGAACTGCAGGAGGTGATAGAAGGTCATAAGATGAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGAGAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCAG]
[+] EMBL CA591231 [AGCAGGAAGACTGAAGACCGACA AGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGGGTGTCCCTGAAGAGTGACCAGTCCAAAGGCCAACCTTTAAACTTTGGTATTGGACCTCAAGGCTCACCTTTAAAGTATCATAAACGGTCTGCTTCCATTGGAGATTCCTCCTGTCCCGAGGGTGAAAAGAAACGGAGAACTGAACTGCAGACCGCCGACCTGAACAACAGCGTCTCACAGGGTGGTGAACTGCAGGAGGTGATAGAAGGTCATAAGATGAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGATAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCAG]
[+] EMBL CA588949 [ cctGATGGAAAACCTCTAATATTCAGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGGGTGTCCCTGAAGAGTGACCACTCCAAATTTGAACCTATCAACTTTGGTATCAGACCTCAAGGCTCACCTTTAAAGTATCAGAAACGGTCTGCTTCCATTGGAGATTCCTCCTGTCCCAAGGGTGAAAAGAAACGGAGAACTGAACTGCAGACCGCCGACCTGAACAACAGCGTCTCACAGGGTGGTGATCTGCAGGAGGTGATAGAAGGTCATAAGATCAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCTTGAGAGAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAAAGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGTTGG AAAACCTTCTCAGTGCAGAAGTTCA ]
consensusID : consensus_2730#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 582 fasta sequence
[CCACAATGATTTAGCAGGACGCGAGCAGACTAAAACAGGGTGATTGGAGATAAACATTTTAGATGGGGGGAAAACTGTTTTTAAAAAGTTGAGATACAGAGAAAGTTGTGGATTATTGAGGATTAAACTTCCAGCTGTGCAAATCCGACCAGTCTGACATGTCCATGGAAACGCCTGTAAACGTCAGCGATGAAGCTGGACCCTTAAACCCAAAAATGGAGGAGGAGGACAGAACAGAGTCTCCAGTGTCCAGCTGTGTGTCTATGAAGAGTAACAGGTCCAAACATGCACCTCCAGACCTCAGAGATGAAGATGAACCTCCAAACCCAAATGACAGCAAGGAGTCCAGCTTCTTATCCTGGGACCAGTCTACTCCACCAGTAAATGAGCTGCAAGAGGTTTTAGAAGAACATAAGATCAGTCTGAAAGGAAGAAGTGAACATGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAGCAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGAATACACAACATGAAGTGAGACAGCTTGAGATAACCTTCAAGAAGA]
[+] EMBL CA589765 [CCACAATGATTTAGCAGGACGCGAGCAGACTAAAACAGGGTGATTGGAGATAAACATTTTAGATGGGGGGAAAACTGTTTTTAAAAAGTTGAGATACAGAGAAAGTTGTGGATTATTGAGGATTAAACTTCCAGCTGTGCAAATCCGACCAGTCTGACATGTCCATGGAAACGCCTGTAAACGTCAGCGATGAAGCTGGACCCTTAAACCCAAAAATGGAGGAGGAGGACAGAACAGAGTCTCCAGTGTCCAGCTGTGTGTCTATGAAGAGTAACAGGTCCAAACATGCACCTCCAGACCTCAGAGATGAAGATGAACCTCCAAACCCAAATGACAGCAAGGAGTCCAGCTTCTTATCCTGGGACCAGTCTACTCCACCAGTAAATGAGCTGCAAGAGGTTTTAGAAGAACATAAGATCAGTCTGAAAGGAAGAAGTGAACATGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAGCAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGAATACACAACATGAAGTGAGACAGCTTGAGATAACCTTCAAGAAGA]
consensusID : consensus_2730#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 546 fasta sequence
[GAAGGGAAAGTGAAAGTTCTCAACTTCGGGCTCCAGCTTGACTGACCGAGCCCTGATGGAAAACCTCTAATATTCAGACTGTTCCTGCTTAACCGTTTAGACTCACATTTAAAAATGAGCGAATGTGTGATGGAAGAGGAAGAGAGAGCAAAGTCCGTAGTGTCCAGCTGTGTGTCCATGAAGAGCGACAGGTCCAAAGAGCGACCTTTCAACTTCAGTATTGGACCTCAAGGCTCACCTTTAAAGATGGACGAGGACAGAGCCGAGTCCACAGTGCCCAGCTGTGTGTCCCTGAAGAGTGACCGGTCCAAAGATAGAGGAATAAACTTCAGAAGTTCAGAGGAAATTGAGAGGGGGGAGCACATCCTATCAAACTGGGACCAGTCAGCTCCACCAGGAGAGTCCTCTTGTTCACGATCTGGAAGCAGATCTGGAGATGCTGAAATGAAGCCCAAACAAAGAGGTGATCTGCAGGAGGTGATAGAAGGTCATAAGATCAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTCATGAAGCA]
[+] EMBL CA588934 [GAAGGGAAAGTGAAAGTTCTCAACTTCGGGCTCCAGCTTGACTGACCGAGCCCTGATGGAAAACCTCTAATATTCAGACTGTTCCTGCTTAACCGTTTAGACTCACATTTAAAAATGAGCGAATGTGTGATGGAAGAGGAAGAGAGAGCAAAGTCCGTAGTGTCCAGCTGTGTGTCCATGAAGAGCGACAGGTCCAAAGAGCGACCTTTCAACTTCAGTATTGGACCTCAAGGCTCACCTTTAAAGATGGACGAGGACAGAGCCGAGTCCACAGTGCCCAGCTGTGTGTCCCTGAAGAGTGACCGGTCCAAAGATAGAGGAATAAACTTCAGAAGTTCAGAGGAAATTGAGAGGGGGGAGCACATCCTATCAAACTGGGACCAGTCAGCTCCACCAGGAGAGTCCTCTTGTTCACGATCTGGAAGCAGATCTGGAGATGCTGAAATGAAGCCCAAACAAAGAGGTGATCTGCAGGAGGTGATAGAAGGTCATAAGATCAGTCTGAAGAGAAGATGTGAACATGTGACTGAAGGAACTCATGAAGCA]
consensusID : consensus_2730#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence
[GTTGCAGACAGACAGAGGCAATTTCAGAATGGAGGGCAGAGCAAAGGCTTCAGTGCCCAGCTGCGTGTCTCTAAAGAGTGACCGCTCCAGGACTTTGCCTCCCAACTTGAGAGATGAAGATGAACCTTCAAAACCAAATGACAGCAAGGAGTCCAGCTTCTTATCCTGGGACCAGTCTACTCCACCAGGGGAGTCCTCTTGTGCAGAATCTGAAAACAGATCCACAACCAGATCTGGACTGAAGACAAAAGCTCAAATGAAGACTGGACAAATAAATGAGCTAAAAGAGGTTTTAGAAGGACATAAGATCAGTCTGAAGAGAAGAAGTGAACATGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAGCAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGAATACACAACATGAAGTGAGACAGCTTGAGATAACCTCCAAGAAGAACGTCCAGGACACTCCAATCAGGTGCCACCAAATCTTCAACATCTTACGTGAGCAACAG]
[+] EMBL CA590859 [GTTGCAGACAGACAGAGGCAATTTCAGAATGGAGGGCAGAGCAAAGGCTTCAGTGCCCAGCTGCGTGTCTCTAAAGAGTGACCGCTCCAGGACTTTGCCTCCCAACTTGAGAGATGAAGATGAACCTTCAAAACCAAATGACAGCAAGGAGTCCAGCTTCTTATCCTGGGACCAGTCTACTCCACCAGGGGAGTCCTCTTGTGCAGAATCTGAAAACAGATCCACAACCAGATCTGGACTGAAGACAAAAGCTCAAATGAAGACTGGACAAATAAATGAGCTAAAAGAGGTTTTAGAAGGACATAAGATCAGTCTGAAGAGAAGAAGTGAACATGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAGCAAGATCTACACTGAGCTCTACATCACTGAGGGACAAAGTGAGGAGGTGAATACACAACATGAAGTGAGACAGCTTGAGATAACCTCCAAGAAGAACGTCCAGGACACTCCAATCAGGTGCCACCAAATCTTCAACATCTTACGTGAGCAACAG]
consensusID : consensus_2730#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 452 fasta sequence
[ACCGAGCCCTGATGGAAAACCTTTAATATTCAGACTGTTCCTGCTTAAGCGTTTAGACTCGGAGGTAAAAATGAGCGAATGTGTGATGGAAGAGGAAGAGAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCATGAAGAGCGACTGGTCCAAAGAGGAACCTGAGAGGAACTTCGGTATTGGACCTCGAGGCTCACCTTTAAAGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCCTGAAGAGTGACCGGTCCAAAGATAAAATAATAGACTTCAGAAGTTCAGACCAAATCTATCAGAAACGGGCTGCTTCCATTGGAGATTCCTCCTGTCCCGAGGGCGAAAAGAAACGGAGAACTGAACTGCAGACCGCCGACCTGAACAACAGCGTCTCACAGGGTGGGGAACTACAGGGGGGGGTAGAAGGCCATAAGATGA]
[+] EMBL FR0062443 [ACCGAGCCCTGATGGAAAACCTTTAATATTCAGACTGTTCCTGCTTAAGCGTTTAGACTCACATTTAAAAATGAGCGAATGTGTGATGGAAGAGGAAGAGAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCATGAAGAGCGACTGCTCCAAAGAGGAACCT TTAAACTTTGGTATTGGACCTCAAGGCTCACCTTTAAAGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCCTGAAGAGTGACCGGTCCAAAGATAAAATAATAGACTTCAGAAGTTCAGACCAAATCTATCAGAAACGGGCTGCTTCCATTGGAGATTCCTCCTGTCCCGAGGGCGAAAAGAAACGGAGAACTGAACTGCAGACCGCCGACCTGAACAACAGCGTCTCACAGGGTGGGGAACTACAGGGGGGGGTAGAAGGCCATAAGATGA]
[+] EMBL FR0059179 [ TAACCGTTTAGACTCGGAGGTAAAAATGAGCGAATGTGTGATGGCCCAGGAAGAGAGAGCAAAGTCCACAGTGCCCAGCTGTGTGTCCCTGAAGAGCGACTGGTCCAAAGAGGAACCTGAGAGGAACTTCGGTATTGGACCTCGAGGCTCACCTTTAAAGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2730#0 ------------------------------------------------------------
consensus_2730#2 ------------------------------------------------------------
consensus_2730#3 ----------------------------CCACAATGATTTAGCAGGAC-GCGAGCAGACT 31
consensus_2730#5 ------------------------------------------------------------
consensus_2730#1 -------------------ACTGAAGACCGACAAGGATGGACGAGGACAGAGCAGAGTCC 41
consensus_2730#4 GAAGGGAAAGTGAAAGTTCTCAACTTCGGGCTCCAGCTTGACTGACCGAGCCCTGATGGA 60
consensus_2730#6 --------------------------------------------ACCGAGCCCTGATGGA 16
consensus_2730#0 ---------------------------------------ATCAGTAAAGACTGAAGACCG 21
consensus_2730#2 ---------------------------------------AGCAG-GAAGACGGAAGACCG 20
consensus_2730#3 AAAACAGGGTGATTGGAGATAAACATTTTAGATGGGGGGAAAACTGTTTTTAAAAAGTTG 91
consensus_2730#5 ---------------------------------------------GTTGCAGACAGACAG 15
consensus_2730#1 ACAGTGCCCAGCTGTGTGTCCCTGAAGAGTGACCGGTCCAAAGATGGGAAGGAAGACTGA 101
consensus_2730#4 AAACCTCTAATATTCAGACTGTTCCTGCTTAACCGTTTAGACTCACATTTAAAAATGAGC 120
consensus_2730#6 AAACCTTTAATATTCAGACTGTTCCTGCTTAAGCGTTTAGACTCGGAGGTAAAAATGAGC 76
consensus_2730#0 ACAA------GGATGGACGAGGACAGAGCACCTTCCACAGTGCCCAGCTGGGTGTCCCTG 75
consensus_2730#2 ACAATATTCAGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGGGTGTCCCTG 80
consensus_2730#3 AGATA--CAGAGAAAGTTGTGGATTATTGAGGATTAA--ACTTCCAGCTGTGCAAATCCG 147
consensus_2730#5 AGGCAATTTCAGAATGGAGGGCAGAGCAAAGGCTTCA--GTGCCCAGCTGCGTGTCTCTA 73
consensus_2730#1 AGACCGACAAGGATGGACGAGGACAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCCTG 161
consensus_2730#4 GAATGTGTGATGGAAGAGGAAGAGAGAGCAAAGTCCGTAGTGTCCAGCTGTGTGTCCATG 180
consensus_2730#6 GAATGTGTGATGGAAGAGGAAGAGAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCATG 136
* * * * * * ******* *
consensus_2730#0 AAGAG--TGACCGGTCCAAAAGTGGAATAATAA---ACTTCAG------------AAGTT 118
consensus_2730#2 AAGAG--TGACCAGTCCAAAGGCGAACCTATAA---ACTTTGGTATCGGACCTCAAGGCT 135
consensus_2730#3 ACCAGTCTGACATGTCCATGGAAACGCCTGTAA---ACGTCAGCGATGAAGCTGGACCCT 204
consensus_2730#5 AAGAG--TGACCGCTCCAGGACTTTGCCTCCCA---ACTTGAGAGATGAAGATGAACCTT 128
consensus_2730#1 AAGAG--TGACCGGTCCAAAGGTGGACTAATAA---ACTTCAG------------AAGTT 204
consensus_2730#4 AAGAG--CGACAGGTCCAAAGAGCGACCTTTCA---ACTTCAGTATTGGACCTCAAGGCT 235
consensus_2730#6 AAGAG--CGACTGGTCCAAAGAGGAACCTGAGAGGAACTTCGGTATTGGACCTCGAGGCT 194
* ** *** **** * ** * * * *
consensus_2730#0 CAGACCAAATCTATCAGAAA----------C----------------GGTC-TGCTTCCA 151
consensus_2730#2 CACCTTTAAAGTATCAGAAA----------C----------------GGTC-TGCTTCCA 168
consensus_2730#3 TAAACCCAAAAATGGAGGAGGAGGACAGAACAGAGTCTCCAGTGTCCAGCTGTGTGTCTA 264
consensus_2730#5 CAAAACCAAATGACAGCAAGGAGTCCAG--CTTCTTATCCTGGGACCAGTC-TAC-TCCA 184
consensus_2730#1 CAGAGAAAATTGAGAGGGGGGAGCACAT--CCTATCAAACTGGGACCAGTC--AGCTCCA 260
consensus_2730#4 CACCTTTAAAGATGGACGAGGA---CAGAGCCGAGTCCACAGTGCCCAGCTGTGTGTCCC 292
consensus_2730#6 CACCTTTAAAGATGGACGAGGA---CAGAGCAGAGTCCACAGTGCCCAGCTGTGTGTCCC 251
* ** * * **
consensus_2730#0 TTGGAGAT------TCCTCCTGTCC------------CGAGGGTGAAAACAAA--CGG-- 189
consensus_2730#2 TTGGAGAT------TCCTCCTGTCC------------CGAGGGTGAAAAGAAA--CGG-- 206
consensus_2730#3 TGAAGAGTAACAGGTCCAAACATGCACCTCCAGACCTCAGAGATGAAGATGAA--CCTCC 322
consensus_2730#5 CCAGGGG-----AGTCCTCTTGTGCA------GAATCTGAAAAC--AGATCCA--CAACC 229
consensus_2730#1 CCAGGAGA-----GTCCTCTTGTTC--------------ACAATCTGGAAGCA--GATCT 299
consensus_2730#4 TGAAGAGTGACCGGTCCAAAGATAGAGGAATAAACTTCAGAAGTTCAGAGGAAATTGAG- 351
consensus_2730#6 TGAAGAGTGACCGGTCCAAAGATAAAATAATAGACTTCAGAAGTTCAGACCAAATCTATC 311
*** * * *
consensus_2730#0 AGAACTGAACTGCAGACCGCCGACCTG-----------AACAACAGCGT--CTCACAGGG 236
consensus_2730#2 AGAACTGAACTGCAGACCGCCGACCTG-----------AACAACAGCGT--CTCACAGGG 253
consensus_2730#3 AAACCCAAATGACAGCAAGGAGTCCAGCTTCTTATCCTGGGACCAGTCTACTCCACCAGT 382
consensus_2730#5 AGATCTGGACTGAAGACAAAAGCTCAAATG--------AAGACTGG--------ACAAAT 273
consensus_2730#1 GGA----GATGCTGAAATGAAGCCCAA---------------------------ACAAAG 328
consensus_2730#4 AGGGGGGAGCACATCCTATCAAACTGG------------GACCAGTCAGCTCCACCAGGA 399
consensus_2730#6 AGAAACGGGCTGCTTCCATTGGA----------------GATTCCTC--CTGTCCCGAGG 353
*
consensus_2730#0 TGGTGAACTGCAGGAGGTGATAGAAGGTCATAAGATCAGTCTGAAGAGAAGATGTGAACA 296
consensus_2730#2 TGGTGAACTGCAGGAGGTGATAGAAGGTCATAAGATGAGTCTGAAGAGAAGATGTGAACA 313
consensus_2730#3 AAATGAGCTGCAAGAGGTTTTAGAAGAACATAAGATCAGTCTGAAAGGAAGAAGTGAACA 442
consensus_2730#5 AAATGAGCTAAAAGAGGTTTTAGAAGGACATAAGATCAGTCTGAAGAGAAGAAGTGAACA 333
consensus_2730#1 AAGTGATCTGCAGGAGGTGATAGAAGGTCATAAGATGAGTCTGAAGAGAAGATGTGAACA 388
consensus_2730#4 GAGTCCTCTTGTTCACGATCTGGAAGCAGATCTGGAGATGCTGAAATGAAG-------C- 451
consensus_2730#6 GCGAAAAGAAACGGAGAACTGAACTGCAGA-CCGCCGAC-CTGAACAACAG-------CG 404
* * * * * ***** ** *
consensus_2730#0 TGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGA 356
consensus_2730#2 TGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGA 373
consensus_2730#3 TGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAGCAAGATCTACACTGA 502
consensus_2730#5 TGTGACTGAAGGAACTAATGAAGCAGGAAGTGGAACCCTGCTGAGCAAGATCTACACTGA 393
consensus_2730#1 TGTGACTGAAGGAACTCATGAAGCAGGAAGTGGAACCCTGCTGAACAAGATCTACACTGA 448
consensus_2730#4 CCAAACAAAGAGGTGATCTGCAGGAGGTGATAGAAGGTCATAAGATCAGTCTGAAGAGAA 511
consensus_2730#6 TCTCACAGGGTGGGGAACTACAGGGGGGGGTAGAAGGCCATAAGATGA------------ 452
** * * ** ** * *** *
consensus_2730#0 GCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCT 416
consensus_2730#2 GCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCT 433
consensus_2730#3 GCTCTACATCACTGAGGGACAAAGTGAGGAGGTGAATACACAACATGAAGTGAGACAGCT 562
consensus_2730#5 GCTCTACATCACTGAGGGACAAAGTGAGGAGGTGAATACACAACATGAAGTGAGACAGCT 453
consensus_2730#1 GCTCTACATCACTGAGGGACAAAGTGAGGAGGTGGACACACAACATGAGGTGAGACAGCT 508
consensus_2730#4 GATGTGAACATGTGACTGAAGGAACTCATGAAGCA------------------------- 546
consensus_2730#6 ------------------------------------------------------------
consensus_2730#0 TGAGAGAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAA 476
consensus_2730#2 TGAGAGAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAA 493
consensus_2730#3 TGAGATAACCTTCAAGAAGA---------------------------------------- 582
consensus_2730#5 TGAGATAACCTCCAAGAAGAACGTCCAGGACACTCCAATCAGGTGCCACCAAATCTTCAA 513
consensus_2730#1 TGAGAGAACCTCCAAGAAGAACATCCAGGACACTCCAATCAAGTGCCAGGACATCTTCAA 568
consensus_2730#4 ------------------------------------------------------------
consensus_2730#6 ------------------------------------------------------------
consensus_2730#0 AGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGT 536
consensus_2730#2 AGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGT 553
consensus_2730#3 ------------------------------------------------------------
consensus_2730#5 CATCTTACGTGAGCAACAG----------------------------------------- 532
consensus_2730#1 AGTCTTATCTGAGCAACAGAGACACATCAGAGTGGTTCTGACCAACGGTGTCGCCGGCGT 628
consensus_2730#4 ------------------------------------------------------------
consensus_2730#6 ------------------------------------------------------------
consensus_2730#0 TGGAAAAACCTTCTCAGTGCAGAAGTTCAGTCTGGACTGGGCAGAAGGTTTGGAGAACCA 596
consensus_2730#2 TGGAAAAACCTTCTCAGTGCAGAAGTTCAG------------------------------ 583
consensus_2730#3 ------------------------------------------------------------
consensus_2730#5 ------------------------------------------------------------
consensus_2730#1 TGGAAAAACCTTCTCAGTGCAGAAGTTCAGTCTGGACTGGGCAGAAGGTTTG-------- 680
consensus_2730#4 ------------------------------------------------------------
consensus_2730#6 ------------------------------------------------------------
consensus_2730#0 AGACATCAGTCTGGTGCTTCCGCTCTCATGCAGGGAGCTGAACTTGATCAGAGATGAGCA 656
consensus_2730#2 ------------------------------------------------------------
consensus_2730#3 ------------------------------------------------------------
consensus_2730#5 ------------------------------------------------------------
consensus_2730#1 ------------------------------------------------------------
consensus_2730#4 ------------------------------------------------------------
consensus_2730#6 ------------------------------------------------------------
consensus_2730#0 GCACAGTCTTCTCTCACTGCTTCATGTTTTCCATCCAACATTACAGAAGATCAGAGCAGA 716
consensus_2730#2 ------------------------------------------------------------
consensus_2730#3 ------------------------------------------------------------
consensus_2730#5 ------------------------------------------------------------
consensus_2730#1 ------------------------------------------------------------
consensus_2730#4 ------------------------------------------------------------
consensus_2730#6 ------------------------------------------------------------
consensus_2730#0 AGATCTGACTGTCTGGAAACTTCTGTTCATCTTTGATGG 755
consensus_2730#2 ---------------------------------------
consensus_2730#3 ---------------------------------------
consensus_2730#5 ---------------------------------------
consensus_2730#1 ---------------------------------------
consensus_2730#4 ---------------------------------------
consensus_2730#6 ---------------------------------------
|
|||||||
| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |