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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2738#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1365 fasta sequence
[GTGGCTGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCTGAGCTACATCAGTCTAGAGGATCCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCAGGATCCTCTCTGTGAGCTGGAGACGCTCAGACTAAGTGGCTGCAGTTTATCAGAGACCAGCTGTGATTCTGTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGGGTTCTGGACCTGAGCACCAACACGTTGCAGGATTCAGGAGTGAAGCGGCTCTGTTCTGGACTGGAGAGTCCAAACTGTAAACTGGAGAGGCTCAGATTGGACAGCTGCAGCTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGTGGGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGGATGCAGCTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGCAAGAACCAGCTGAAGGATTCAGGAGTGAAGCAGCTGTCTGATCTCGTAGAGAATCCAGACTATGGGCTGGAGACATTGAGTCAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGTGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCCTCCATAGATGAAGAATTCAGTTTTTAAAAAGCGCTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAATTAGTTCCTGGTATCACACAATGCATCTTTATAAAGTTCTAAATGGCTCCTCGGCCACTCTTAGAAGCATGGAAACATTCTCTTAATTGTCTCTTCAAATGTCTGTATTATACGTTACTATTTTACATCATGCCTTCAGAATCTTTAGGGTTTAGTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAGCTGCAGCCAGCAAAAACCCATCAGAATGACGGCTATCGGTGGGAACCACAGGTCATTTGACTTTAGTCAGTCTGTTCAATGTTATAGGATTTATTGCAATCTAATAAAAACTATGAATAAATGTGGGAAATAGGAAATAAAAAGAAGCAAAATGACCAAA-AAATCTCCCATGAATACTGTAAATTTAAAGATGTCAAGAATGGAATATCAGCTCAAATGGAATCAAACATAAAGGGAAAAGGCCTCCTTTAAGTTTACTGCAAAAATAAACACAAAATCA]
[+] EMBL BU807839 [GTGGCTGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCTGAGCTACATCAGTCTAGAGGATCCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCAGGATCCTCTCTGTGAGCTGGAGACGCTCAGCCTAAGTGGCTGCAGTTTATCAGAGACCTGCTGTGATTCTGTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGGGTTCTGGACCTGAGCTCCAACACGTTGCAGGATTCAGGAGTGAAGCGGCTCTGTTCTGGACTGGAGAGTCCAAACTGTAAACTGGAGAGGCTCAGATTGATTAACTGCAGCTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGTGAGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGACTGCAGCTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGCTACAAC ]
[-] EMBL CA588712 [ tCTCAGACTAAGTGGCTGCAGTTTATCAGAGACCAGCTGTGATTCTATGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGGGTTCTGGACCTGAGCATCAACACGTTGCAGGATTCAGGAGTGAAGCGGCTCTGTTCTGGACTGGAGAGTCCAAACTGTAAACTGGAGAGGCTCAGATTAGACTGCTGCAGTTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCACTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGTTGGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGAGATGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGTAAGAACCAGCTGAAGGATTCAGGAGTGAAGCAGCTGTCTGATCTCGTAGAGAATCCAGACTATGGGCTGGAGACATTGAGTCAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGTGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCCTCCATAGATGAAGAATTCAGTGTTTAAAAAGCGGTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGA ]
[-] EMBL CA588804 [ ATCCACACTATGGGCTGGAGACATTGAGTCAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGTGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCCTCCATAGATGAGAAATTCAGTTTTTAAAAAGCGCTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCTCCTTGAAGTTAAATTAGTTCCTGGTATCACACAATGCATCTTTATAAAGTTCTAAATGGCTCCTCGGCCACTCTTAGAAGCATGGAAACATTCTCTTAATTGTCTCTTCAAATGTCAAAATTATACGTTACTATTTTACATCATGCCTTCAGAATCTTTAGGGTTTAGTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAGCTGCAGCCAGCAAAAACCCATCAGAATGACGGCTATCGGTGGGAACCACAGGTCATTTGACTTTAGTCAGTCTGTTCAATGTTATAGGATTTATTGCAATCTAATAAAAACTATGAATAAATGTGGGAAATAGGAAACAAAAAGAAGCAAAATGACCAAATAAATCTCCCATGAATACTGTAAATTTAAAGA ]
[-] EMBL CA331089 [ ACCACTGGTGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCCTCCATAGATGAAGAATTCAGTTTTTAAAAAGCGCTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAATTAGTTCCTGGTATCACAAAATGCATCTTTATAAAGTTCTAAATGGCTCCTCGGCCACTCTTATGAGCATGGAAACATTCTCTTAATTGTCTCTTCAAATGTCTGTATTATACGTTACTATTTTACATCATGCCTTCAGAATCTTTAGGGTTTAGTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAGCTGCAGCCAGCAAAAACCCATCAGAATGACGGCTATCGGTGGGAACCAAAGCTCATTTGACTTTAGTCAGTCTGTTCAATGTTATAGGATTGATTGCAATCTAATAAAAACTATGAATAAATGTGGGAAATAG ]
[+] EMBL CA330078 [ ACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAATTAGTTCCTGGTATCACACGATGCATCTTTATAAAGTTCTAAATGGCTCCTCGGCCACTCTTAGAAGCATGGAAACATTCTCTTAATTGTCTCTTCAAATGTCTGTATTATACGTTACTATTTCTCATCATGCCTTCAGAATCTTTAGGGTTTATTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAGCTGCAGCCAGCAAAAACCCATCAGAATGAC GCTATCGGT GGAACCGCAGCTCATTTGACTTTAGTCAGTCTGTTCAATGTTATAGGATTTATTGCAATCTAATAAAAACTATGAATAAATGTGGGAAATAGGAAATAAAAAGAAGCAAAATG ]
[-] EMBL CA332689 [ AGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAATTAGTTCCTGGTATCACACAATGCATCTCTATAAAGTTCTAAATGGCTCCTCGACCACTCTTATAAGCATGGAAACATTCTCTTAATTGTCTCTTCAAATGTCTGTATTATACGTTACTATTTTACATCATGCCTTCAGAATCTTTAGGGTTTAGTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAGCTGCAGCCAGCAAAAACCCACCAGAATGACGGCTATCGGTGGGAACCACAGGTCATTAGACTTTAGTCAGTCTGTTCAATGTTATATGATTTATTGCAATCTAATAAAAACTATGAACAAATGTGGGAAATAGGAAATAAAAAGAAGTAAAATGACC AAATCTCCCATGAATACTGTAAATTTAAAGATGTCAAGAATGGAATATCAGCTCAAATGGAATCAAACATAAAGGGAAAAGGCCTCCTTTAAGTTTACTGCAAAAATAAACACAAAATCA]
consensusID : consensus_2738#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1357 fasta sequence
[CACCATCAAGAATAAAGGGATTATGGAGTCTTTCCTAAAATATTTGAAACCAAACCCTTTTTGCTGGTTTGCTGGGTTGT---AAAATAACGATCCAGTCAAATCTCTTGATGACTTCCTCAGGAGAGAACTAATGAAATCTCTTGAAAGTGAAAATGGCCACCTGGACTTGTTTGTTCGCTTCCTTCATGGTCTCTCTCTGGAGTCCAATCGGAGGATCTTGGGTGGACTGTTGGATCAGAGGAACAGCCGCTCAGAAACCATCCAGAAGGTCCTCAACAACCTGAAGGAGGTGAACAGTGATGAAATCTCCCCAGACAGAAGCATCAACATCTTCCACTGTCTGATGGAGATGAAGGATCAGTCAGTCCATCAGGAGATCCAAGAGATCCTGAAGTCAGAGAAGAAATCAGAGAGGGGACTGTCAGAGATCCACTGTTCAGCTCTGGCCTACCTGCTGCAGATGTCAGAGGAGGTTCTGGATGAGCTGGACCTGCAGCAGTACAAAACCTCAGAGGAGGGACGACGTCGCCTGATTCCAGCTGTGAGGAACTGCAGGAAGGCCGAACTGTCTGGTAGTTTTCTTTCAAAGAGTCATTGGGAAGTTGTGGCCTCAGCAATGACGTCAAACCCTTCTCATCTACGGGAGCTGAGCTTAAGCGAGAACAAAAGCCTGACAGATGCTGCAGTAAAGTTACTGTCTTCTGCAATGATGCATCCAAACTGCAGACTGGAGACGCTCAGGTTGTCTTGCGGGAGTCTATGGGATCGGAGGTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGAGCTGAGCGGGAACCAGCTGGAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGGCTGCAGGTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGAGAGAACCAGCTGAAGGATTCAGAGCTGAAGCTGCTGTCTGATCTCGTAGAGAATCCACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGAGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCGTCCATAGATGAAAAAATCAGTTTTTAAAAAGCGGTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAAATAGTTCCTGGTATCATCGGTGTTGTGTGTATATTTAATAACACAATCTCAAGTTGTTTATTTTAAATAAAAGAACACCGTGAGGTCACCTG]
[+] EMBL CA589492 [CACCATCAAGAATAAAGGGATTATGGAGTCTTTCCTAAAATATTTGAAACCAAACCCTTTTTCCTGTTTTGCTGGGTTGT ATAATAACGATCCAGTCAAATCTCTTGATGACTTCCTCATGAGAGAACTAATGAAATCTCTTGAAAGTGAAAATGGCCACCTGGACTTGTTTGTTCGCTTCCTTCATGGTCTCTCTCTGGAGTCCAATCGGAGGATCTTGGGTGGACTGTTGGATCAGAGGAACAGCCGCTCAGAAACCATCCAGAAGGTCCTCAACAACCTGAAGGAGGTGAACAGTGATGAAATCTCCCCAGACAGAAGCATCAACATCTTCCACTGTCTGATGGAGATGAAGGATCAGTCAGTCCATCAGGAGATCCAAGAGTTCCTGAAGTCAGAGAAGAAATCAGAGAGGGAACTGTCAGAGATCCACTGTTCAGCTCTGGCCTACCTGCTGCAGATGTCAGAGGAGGTTCTGGATGAGCTGGACCTGCAGCTGTACAAAACCTCAAAGGAGGGACGACGTCGCCTGATTCCAGCTGTGAGGAACTGCAGGAAGGCCGTACT ]
[+] EMBL FR0061653 [ CAATAATAAAGGTATTATGGAGTCTTTCTTAAAATATTTGAAACCAAACCCTTTTTGCTGGTTTGCTGTGTTGTTCACAAATAACGATCCAGTCACATCTCTTGATGACTTCCTCAGGAGAGCACTAATGAAATCTCTTGAAAGTGAAAATGGCCACCTGTACTTGTTTGTTCGCTTCCTTCATGGTCTCTTTCTGGAGTCCAATCAGAGGATCTTGTGTG ]
[+] EMBL FR0058664 [ GAAGGATCAGTCAGTCCTTCAGGAGATCCAAGAGATCCTGAAGTCAGAGAAGAAATCAGAGAGGAGACTGTCAGAGATCCACTGTTCAGCTCTGGCCTACCTGCTGCAGATGTCAGAGGAGGTTCTGGATGAGCTGAACCTGCAGCAGTACAACACCTCAGATGAGGGACGACGTCGCCTGATTCCAGCTGTGAGGAACTGCAGGAAGGCCGAACTGTCTGGTAGTTTTCTTTCAAAGAGTCATTGGGAAGTTGTGGCCTCAGCAATGACGTCAAACCCTTCTCATCTACGGGAGCTGAGCTTAAGCGAGAACCAAAGCCTGACAGATG ]
[+] EMBL CA341060 [ GACGACGTCGCCTGATTCCAGCTGTGAGGAACTGCAGGAAGGCCGAACTGTCTGGTAGTTTTCTTTCAAAGAGTCATTGGGAAGTTGTGGCCTCAGCAATGACGTCAAACCCTTCTCATCTACGGGAGCTGAGCTTAAGCAAGAACAAAAGCCTGACAGATGCTGCAGTAAAGTTACTGTCTTCTGCAATGATGCATCCAAACTGCAGACTGGAGACGCTCAGGTTGTCTTGCTGCAGTTTATCAGATCTTAGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCTGAGTGGGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGCGCTGCAGCTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCACTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGTGAGAACCAGCTGCAGGATTCAGAGCTGAAGCTGCTGTCTGATCTCGTAGAGAATCCACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGTG ]
[-] EMBL CA332190 [ tGTGACTCTCTGGCCTCGGCGGTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGAGCTGAACTCCAACTTTCTAGAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGACTGCAGGTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGACAGAACCACCTGAAGGATTCAGAGCTGAAGCTGCTGTCTGCTCTCGTAGAGAATCCACACTATGGGCTGGAGACATTGAGTCAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGAGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCGTCCATAGATGAAAAAATCAGTTTTTAAAAAGCGGTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAAATAGTTCCTGGTATCATCGGTGTTGTGTGTATATTTAATAACACAATCTCAAGTTGTTTATTTTAAATAAAAGAACACCGTGAGGTCACCTG]
consensusID : consensus_2738#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 588 fasta sequence
[GGAAACCAAAGCCTGACAGATGCCGGGGTAAAGTTACTGTCTTCGGCAATGATGCATCCAAACTGCAGACTGGAGACGCTCAGGCTGAGGGGCTGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCTGAGTAGGAACCAGCTGAAGGATCCAGCAGTGAAGCAGCTCTGTGGTTTTCTCCAGGATCCTCTCTGTGAGCTGGAGACTCTCAGGTCAGTCAGAGATGATCCAGTGCTTTCCCAGGTGTAACTAGTTAGACAATAACTGTTTCCATGTTTGATCTTTGTTATAAACGTAGTGTTACAGTTCTCAGAAAAAAGACCACACAGGACAGATTTGCAGTAATAAATTGCTTGTGGAAATCTGTCCCATGTGAGGATGGTCATCAATGACTAGAAAGGAAGTATCAGTTGTAGATTTGTCTTGTTTTATTTTAGGCTGGCCACAAAACCGCCCAAACATTCAGACACATCAAAAATGGTTCTTCCTGTCTTTTAAAGATCAGAAGGAAAACTAGAAACCCCAAAAAGAAAGCTGCTGCAG]
[-] EMBL CA332318 [GGAAACCAAAGCCTGACAGATCC GGTAAAGTTCCTGTCTTCGGCAATGATGCATCCAACCTGCAGACTGGAGACGCTCAGGTTGTCGCGCTGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGCCCTGAGTCAGACCCAGCTGAAGGATCCAGCAGTGAAGCAGCTCTGTGGTTTTCTCCAGGATCCTCTCTGTAA ]
[+] EMBL CA329901 [ TGACAGATGCCGGAGTAAAGTTACTGTCTTCTGCAATGATGCATCCAAACTGCAGACTGGAGACGCTCAGACTGAGTGGCTGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCTGAGTAGGAACCAGCTGCAGGATCCAGCAGTGAAGCTGCTCTGTGGTTTTCTCCAGGATCCTCTCTGTGAGCTGGAGACTCTCAGGTCAGTCAGAGATGATCCAGTGCTTTCCCAGGTGTAACTAGTTAGACAATAACTGTTTCCATGTTTGATCTTTGTTATAAACGTAGTGTTACAGTTCTCAGAAAAAAGACCACACAGGACAGATTTGCAGTAATAAATTGCTTGTGGAAATCTGTCCCATGTGAGGATGGTCATCAATGACTAGAAAGGAAGTATCAGTTGTAGATTTGTCTTGTTTTATTTTAGGCTGGCCACAAAACCGCCCAAACATTCAGACACATCAAAAATGGTTCTTCCTGTCTTTTAAAGATCAGAAGGAAAACTAGAAACCCCAAAAAGAAAGCTGCTGCAG]
consensusID : consensus_2738#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 568 fasta sequence
[ATCAGCTGTGGTTCTCTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGAGAACTGGACCTGAGTGAGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTTCTGGACTGGAGAGTCCAAACTGTAAACTGGAGACTCTCAGTTTGAGAGGGTGCGGTTTATCAGAGATCAGCTGTGATTCTCTGGCCTCAGCGCTGAAGTCCAACCCCTCCCATCTGAAAGAACTGAACCTGGGTCAGAACCACCTGCAGGATTCAGGAGTTGCAATTTTGTCAGATCTTGTGACAAGCCCAAGCTATAAACTGGAGACTCTGGGGTCTCTGTTTGATCCTGCTTTTTAATCTCTCAAGCTGTGACAGCAGAATGTTGATAGGCGTTAGGATTGGCTCTGAAGAGAGAAGAGACATCCGATTATATCATCTTGTTCTAATTGTTATGACAGTTGTGGTCAATGTAAATTATGTAAATAAATCTGTATTACAGGTCGAAACAATTCTGATTCATCAAACCATCCTTCCATTAAAGTGTTTCTCTTATTCAAACGGTATTCAAATAAACATT]
[-] EMBL CA331082 [ATCAGCTGTGGTTCTCTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGAGAACTGGACCTGAGTGAGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTTCTGGACTGGAGAGTCCAAACTGTAAACTGGAGACTCTCAGTTTGAGAGGGTGCGGTTTATCAGAGATCAGCTGTGATTCTCTGGCCTCAGCGCTGAAGTCCAACCCCTCCCATCTGAAAGAACTGAACCTGGGTCAGAACCACCTGCAGGATTCAGGAGTTGCAATTTTGTCAGATCTTGTGACAAGCCCAAGCTATAAACTGGAGACTCTGGGGTCTCTGTTTGATCCTGCTTTTTAATCTCTCAAGCTGTGACAGCAGAATGTTGATAGGCGTTAGGATTGGCTCTGAAGAGAGAAGAGACATCCGATTATATCATCTTGTTCTAATTGTTATGACAGTTGTGGTCAATGTAAATTATGTAAATAAATCTGTATTACAGGTCGAAACAATTCTGATTCATCAAACCATCCTTCCATTAAAGTGTTTCTCTTATTCAAACGGTATTCAAATAAACATT]
consensusID : consensus_2738#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 429 fasta sequence
[CAACCATCTGCTGGATCCAGCAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCAACTGGAAACTCTGAGATTAAGGAACTGCAGCTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGAGAGAACCAGCTGAAGGATTCAGGAGTGAAGCTGCTGTCTGCTCTCGTAGAGAATCCACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAACAAAAAAAAGGGAAACGTGGGTTTGTCCCAGGCTTCAGCTTCCTCAAGGCTTAATTCCATTAATAATTCCTAAACTTCCAGGGGTTTTGAGCGCTAGCGGCTGGACGGATGCTTCTATTTTGTCTTGGCTGGAATAAAAGGGCGACTCTTCC]
[-] EMBL CA332204 [CAACCATCTGCTGGATCCAGCAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCAACTGGAAACTCTGAGATTAAGGAACTGCAGCTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGAGAGAACCAGCTGAAGGATTCAGGAGTGAAGCTGCTGTCTGCTCTCGTAGAGAATCCACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAACAAAAAAAAGGGAAACGTGGGTTTGTCCCAGGCTTCAGCTTCCTCAAGGCTTAATTCCATTAATAATTCCTAAACTTCCAGGGGTTTTGAGCGCTAGCGGCTGGACGGATGCTTCTATTTTGTCTTGGCTGGAATAAAAGGGCGACTCTTCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2738#1 CACCATCAAGAATAAAGGGATTATGGAGTCTTTCCTAAAATATTTGAAACCAAACCCTTT 60
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 ------------------------------------------------------------
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 TTGCTGGTTTGCTGGGTTGTAAAATAACGATCCAGTCAAATCTCTTGATGACTTCCTCAG 120
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 ------------------------------------------------------------
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 GAGAGAACTAATGAAATCTCTTGAAAGTGAAAATGGCCACCTGGACTTGTTTGTTCGCTT 180
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 ------------------------------------------------------------
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 CCTTCATGGTCTCTCTCTGGAGTCCAATCGGAGGATCTTGGGTGGACTGTTGGATCAGAG 240
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 ------------------------------------------------------------
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 GAACAGCCGCTCAGAAACCATCCAGAAGGTCCTCAACAACCTGAAGGAGGTGAACAGTGA 300
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 ------------------------------------------------------------
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 TGAAATCTCCCCAGACAGAAGCATCAACATCTTCCACTGTCTGATGGAGATGAAGGATCA 360
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 ------------------------------------------------------------
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 GTCAGTCCATCAGGAGATCCAAGAGATCCTGAAGTCAGAGAAGAAATCAGAGAGGGGACT 420
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 -----------------------------------------------GTGGCTGCAGTTT 13
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 GTCAGAGATCCACTGTTCAGCTCTGGCCTACCTGCTGCAGATGTCAGAGGAGGTTCTGGA 480
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 ATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAG 73
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 TGAGCTGGACCTG-----CAGCAGTACAAAACCTC----AGAGGAGGGACGACGTCGCCT 531
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 GGTTCTGGACCTGAGCTACATCAGTCTAGAGGATCCAGGAGTGAAGCTGCTCTGTGGTTT 133
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 GATTCCAG---CTGTGAGGAACTGCAGGAAGGCCGAACTGTCTGGTAGTTTTCTTTCAAA 588
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 TCTCCAGGATCCTCTCTGTGAGCTGGAGACGCTCAGACTAAGTGGCTGCAGTTTATCAGA 193
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 GAGTCATTGGGAAGTTGTGGCCTCAGCAATGACGTCAAACCCTTCTCATCTACGGGAGCT 648
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 GACCAGCTGTGATTCTGTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGGGTTCT 253
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 GAGCTTAAGCGAGAACAAAAGCCTGACAGATGCTGCAGTAAAGTTACTGTCTTCTGCAAT 708
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 GGACCTGAGC---ACCAACACGTTGCAGGATTCAGGAGTGAAGCGGCTCTGTTCTGGACT 310
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 GATGCATCCAAACTGCAGACTGGAGACGCTCAGGTTGTCTTGCGGGAGTCTATGGGA--- 765
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 GGAGAGTCCAAACTGTAAACTGGAGAGGCTCAGATTGGACAGCTGCAGCTTATCAGAGAT 370
consensus_2738#3 ----------------------------------------------------------AT 2
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 -------------------TCGGAGGTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGA 806
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 CAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGA 430
consensus_2738#3 CAGCTGTGGTTCTCTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGAGAACTGGA 62
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 GCTGAGCGGGAACCAG---CTGGAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCA 863
consensus_2738#4 ---------CAACCAT---CTGCTGGATCCAGCAGTGAAGCTGCTCTGTGGTTTTCTCCA 48
consensus_2738#0 CCTGAGTGGGAACCAG---CTGCAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCA 487
consensus_2738#3 CCTGAGTGAGAACCAG---CTGCAGGATTCAGGAGTGAAGCTGCTCTGTTCTGGACTGGA 119
consensus_2738#2 -------GGAAACCAAAGCCTGACAGATGCCGGGGTAAAGTTACTGTCTTCGGCAATGAT 53
***** *** *** * * ** *** * ** * * *
consensus_2738#1 CTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGGCTGCAGGTTATCAGAGATCAG 923
consensus_2738#4 CTTTCCAAACTGCCAACTGGAAACTCTGAGATTAAGGAACTGCAGCTTATCAGAGATCAG 108
consensus_2738#0 CTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGGATGCAGCTTATCAGAGATCAG 547
consensus_2738#3 GAGTCCAAACTGTAAACTGGAGACTCTCAGTTTGAGAGGGTGCGGTTTATCAGAGATCAG 179
consensus_2738#2 GCATCCAAACTGCAGACTGGAGACGCTCAGGCTGAGGGGCTGCAGTTTATCAGAGATCAG 113
********* ****** ** ** ** * ** *** * **************
consensus_2738#1 CTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCT 983
consensus_2738#4 CTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCT 168
consensus_2738#0 CTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCT 607
consensus_2738#3 CTGTGATTCTCTGGCCTCAGCGCTGAAGTCCAACCCCTCCCATCTGAAAGAACTGAACCT 239
consensus_2738#2 CTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCT 173
***** *********** ******* ****** *********** * * *** ****
consensus_2738#1 GAGAGAGAACCAGCTGAAGGATTCAGAGCTGAAGCTGCTGTCTGATCTCGTAGAGAATCC 1043
consensus_2738#4 GAGAGAGAACCAGCTGAAGGATTCAGGAGTGAAGCTGCTGTCTGCTCTCGTAGAGAATCC 228
consensus_2738#0 GAGCAAGAACCAGCTGAAGGATTCAGGAGTGAAGCAGCTGTCTGATCTCGTAGAGAATCC 667
consensus_2738#3 GGGTCAGAACCACCTGCAGGATTCAGGAGTTGCAATTTTGTCAGATCTTGTGACAAGCCC 299
consensus_2738#2 GAGTAGGAACCAGCTGAAGGATCCAGCAGTGAAGCAGCTCTGTGGTTTTCTCCAGGATCC 233
* * ****** *** ***** *** * * * * * * * **
consensus_2738#1 ACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCAT 1103
consensus_2738#4 ACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAAC---------- 278
consensus_2738#0 AGACTATGGGCTGGAGACATTGAGTCAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCAT 727
consensus_2738#3 AAGCTATAAACTGGAGACTCTGGGGTCTCTGTTTGATCCTGCTTTTTAATCTC------- 352
consensus_2738#2 TCTCTGTGAGCTGGAGACTCTCAGGTCAGTCAGAGATGAT-CCAGTGCTTTCCCAG--GT 290
** * ******** * * * * * *
consensus_2738#1 CTGCTGCATCACTCACTGACCACTGGAGAAGAGCATCTGTGGAAACATCTGCCGTCTACT 1163
consensus_2738#4 ---------------------AAAAAAAAGGGAAACGTGGGTTTGTCCCAGGCTTCAGCT 317
consensus_2738#0 CTGCTGCATCACTCACTGACCACTGGTGAAGAGCATCTGTGGAAACATCTGCCGTCTACT 787
consensus_2738#3 ----------------TCAAGCTGTGACAGCAGAATGTTGATAGGCGTTAGG-ATTGGCT 395
consensus_2738#2 GTAACTAGTTAGACAATAACTGTTTCCATGTTTGATCTTTGTTATAAACGTAGTGTTACA 350
* * *
consensus_2738#1 CCGTCCATAGATGAAAAAATCAGTTTTTAAAAAGCGGTGGTGGACTTTCAGGAGATCAGT 1223
consensus_2738#4 TCCTCAAGGCTTAATTCCATTAATAATTCCTAAACTTCCAGGGGTTTTGAGCG--CTAGC 375
consensus_2738#0 CCCTCCATAGATGAAGAATTCAGTTTTTAAAAAGCGCTGGTGGACTTTCAGGAGATCAGT 847
consensus_2738#3 CTGAAGAGAGAAGAGACATCCGATTAT--ATCATCTTGTTCTAATTGTTATGACAGTTGT 453
consensus_2738#2 GTTCTCAGAAAAAAGACCACACAGGACAGATTTGCAGTAATAAATTGCTTGTGGAAATCT 410
* * * *
consensus_2738#1 CGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTG-AAGTTAAAATAGTTCCTGGT-ATCA 1281
consensus_2738#4 GGCTGGACGGATGCTTCTATTTTGTCTTGGCTGG-AA--TAAAAGGGCGACTCTT-CC-- 429
consensus_2738#0 CGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTG-AAGTTAAATTAGTTCCTGGT-ATCA 905
consensus_2738#3 GGTCAATGTAAATTATGTAAATAAATCTGTATTACAGGTCGAAACAATTCTGATTCATCA 513
consensus_2738#2 GTCCCATGTGAGGATGGTCATCAA---TGACTAGAAAG--GAAGTATCAGTTGTAGATTT 465
* * * **
consensus_2738#1 TCGGTGTTGTGTGTATATTTAATAACACAATCTCAAGTTGTTTATTTTAAATAAAAGAAC 1341
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 CACAATGCATCTTTATAAAGTTCTAAATGGCTCCTCGGCCACTCTTAGAAGCATGGAAAC 965
consensus_2738#3 AACCATCCTTCCATTAAAGTGTTTCTCTTATTCAAACGGTATTCAAATAAACATT----- 568
consensus_2738#2 GTCTTGTTTTATTTTAGGCTGGCCACAAAACCGCCCAAACATTCAGACACATCAAAAATG 525
consensus_2738#1 ACCGTGA-GGTCACCTG------------------------------------------- 1357
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 ATTCTCTTAATTGTCTCTTCAAATGTCTGTATTATACGTTACTATTTTACATCATGCCTT 1025
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 GTTCTTCCTGTCTTTTAAAGATCAGAAGGAAAACTAGAAACCCCAAAAAGAAAGCTGCTG 585
consensus_2738#1 ------------------------------------------------------------
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 CAGAATCTTTAGGGTTTAGTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAG 1085
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 CAG--------------------------------------------------------- 588
consensus_2738#1 ------------------------------------------------------------
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 CTGCAGCCAGCAAAAACCCATCAGAATGACGGCTATCGGTGGGAACCACAGGTCATTTGA 1145
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 ------------------------------------------------------------
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 CTTTAGTCAGTCTGTTCAATGTTATAGGATTTATTGCAATCTAATAAAAACTATGAATAA 1205
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 ------------------------------------------------------------
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 ATGTGGGAAATAGGAAATAAAAAGAAGCAAAATGACCAAAAAATCTCCCATGAATACTGT 1265
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 ------------------------------------------------------------
consensus_2738#4 ------------------------------------------------------------
consensus_2738#0 AAATTTAAAGATGTCAAGAATGGAATATCAGCTCAAATGGAATCAAACATAAAGGGAAAA 1325
consensus_2738#3 ------------------------------------------------------------
consensus_2738#2 ------------------------------------------------------------
consensus_2738#1 ----------------------------------------
consensus_2738#4 ----------------------------------------
consensus_2738#0 GGCCTCCTTTAAGTTTACTGCAAAAATAAACACAAAATCA 1365
consensus_2738#3 ----------------------------------------
consensus_2738#2 ----------------------------------------
|
|||||||
| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |