Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2761 cluster # 2761       Sequences # 17       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2761#0 length = 460 sequences # 17  

consensusID : consensus_2761#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 460
fasta sequence
                              [AGAAATATGGGCAAGTTCATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA-CAACCACCTGATGCCCAC-CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG-TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACGTTTAAAAATGGAAAAAAAAAAA]

[+] EMBL CA330447             [AGAAATATGGGCAAGTTCATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACGTTTAAAAAT             ]
[+] EMBL CA341144             [   AATATGGGCAAGTTCATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTATCAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACGTTTAAAAAT             ]
[+] EMBL CA340929             [   AATATGGGCAAGTTCATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGTCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAA                         ]
[+] EMBL CA330190             [         GGCAAGTTCATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACGTTTAAAA               ]
[+] EMBL CA333524             [      tgccGCAAGTTCATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACG                      ]
[+] EMBL FR0055538            [            AAGTTCATGACGCCTGGGAAGGTGGTCATGGTCCTGACCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAGAGTCACCACCACCATGGGCAAGACGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGACAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGACCTCATGCATAAAGCCAGGCGCAAGGCCAAGGTCAAG ATTGAGGAGAGGTACAAGACGGGCACAATCAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCA                                ]
[+] EMBL CA341185             [             AGTTCATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACGTTTAAAAAT             ]
[+] EMBL CA330915             [             AGTTCATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTATGCTGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACGTTT                   ]
[+] EMBL FR0055545            [             AGTTCATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAGAGTCACCACCACCATGGTCAAGAAGAAGATCGCCAGGAGGTCCAAGATCAAGGACTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGTCCTCATGCATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCACCAACATGTGGTTCTTCCAGAAACTCCGATTCTAACTTC                                       ]
[+] EMBL FR0056498            [                  ATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGGCCTCAAACATAAAGCCAGGCGGGAGGCCAACGTCAAGTTTTGAGGACAGGTACAAGCCGGGCAATAGCATGT                                                                     ]
[+] EMBL FR0055738            [                               AGGTGGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAGACATAAAGCCAGGCGGCAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCGAACTTCAG                                     ]
[+] EMBL CA341161             [                                   GGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACGTTTAAAA               ]
[+] EMBL CA341139             [                                   GGTGATGGTCCTGGCCGGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACGTTTAAAA               ]
[+] EMBL CA340957             [                                                   GGACGCTATGCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACG                      ]
[+] EMBL CA845206             [                                                                  CGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCACTCAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACGTTTAAAAATGGAAAAAAAAAAA]
[+] EMBL CA330663             [                                                                                                              CCGCCCCTACAGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CATGTTTTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAG TTTGAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTTCAGTTTCACAAATAAACGTTTAAAAAT             ]
[+] EMBL CA330922             [                                                                                                                                       GCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGCAAGAAGAAGATCGCCAAGAGGTCCAAGTACAAGGCCTTCGTCAAGGTGTTCAACTA CAACCACCTGATGCCCAC CAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAGGACGTGTTCAGAGATCCGGCCCTCAA                                                                                                                                       ]


>consensus_2761#0 AGAAATATGGGCAAGTTCATGAAGCCTGGGAAGGTGGTGATGGTCCTGGCCGGACGCTAT GCCGGCCGCAAGGCTGTCATCGTTAAGAACATCGACGACGGCACAGCTGACCGCCCCTAC AGTCACGCCCTGGTCGCCGGCATCGACCGCTACCCCCGCAAAGTCACCACCACCATGGGC AAGAAGAAGATCGCCAAGAGGTCCAAGATCAAGGCCTTCGTCAAGGTGTTCAACTACAAC CACCTGATGCCCACCAGGTACTCCGTGGACATCCCTCTGGACAAAACTGTGGTCAACAAG GACGTGTTCAGAGATCCGGCCCTCAAACATAAAGCCAGGCGGGAGGCCAAGGTCAAGTTT GAGGAGAGGTACAAGACGGGCAAAAACAAGTGGTTCTTCCAGAAACTCCGATTCTAACTT CAGTTTCACAAATAAACGTTTAAAAATGGAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)