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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2762#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 596 fasta sequence
[CGTTGAACGACTAGCATCAAGCGAGCATCACGATGCAGCTCTTCTTGCGTGCCCAGAACACTCACACCC-TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTC-GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCCCAACCCATCAGTTTTAACCAAGTTCAATGTTATCCTGCTGTACAGAATAAAGTTTGGCTTGGAAGAAGAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCGGGGGGGGCCCGGAAAAAAATTTTT]
[+] EMBL CA589122 [CGTTGAACGACTAGCATCAAGCGAGCATCACGATGCAGCTCTTCTTGCGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGTTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTC GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCCCAACCCATCAGTTTTAACCAAGTTCAATGTTATCCTGCTGTACAGAATAAAGTTTGGCTTGGAAGAAGCAGAAA ]
[+] EMBL BU805936 [ GTTGAACGACTAGCATCAAGCGAGCATCACGATGCAGCTCTTCTTGCGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTC GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCCCAACCCATCAGTTTTAACCAAGTTCAATGTTATCCTGCTGTACAGAATAAAG ]
[+] EMBL BU807864 [ GTTGAACGACTAGCATCAAGCGAGCATCACGATGCAGCTCTTCTTGCGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTT GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTG ]
[+] EMBL CA333218 [ GTTGAACGACTAGCATCAAGCGAGCATCACGATGCAGCTCTTCTTGCGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTT GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCC ]
[+] EMBL CA589473 [ TGAACGACTAGCATCAAGCGAGCATCACGATGCAGCTCTTCTTGCGCGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTC GTATGTTAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCC ]
[+] EMBL FR0058510 [ GATGCAGCTCTTCTTGCGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTC GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGGAGAAGGGAC ]
[+] EMBL FR0055642 [ GCTCTTCTTGCGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGAATCCTGTGGGGTTTCAGAGCACTGCACGCTGGAAGTTGTTGGTAGGCTTCTC GGAGGCAAGGTTCACGGCTCTCTGGTCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAATGTTGACACGCAGGACAGGAAGAAAAAGAAGACTGGACGTGCGACGCGTCGCATCCAGTACAGCAGACGCTTTGTCAATGTCGTCCCTACCTTTGTGAAGAACAAGGGACGCACTGCTAACTCCTAGGTGCTATTGAT ]
[+] EMBL BU807404 [ TTCTTGCGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGTTGGCTTCTC GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCCCAACCCATCAGTTTTAACCAAGTTCAATGTTATCCTG ]
[+] EMBL CA329918 [ TCTTGCGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTCTTTTTGTAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCCCAACCCATCAGTTTTA ]
[-] EMBL CA332361 [ CGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGTTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTC GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCCCAACCCATCAGTTTTAACCAAGTTCAATGTTATCCTGCTGTACAGAATAAAGTTTGGCTTGGAAGAAG ]
[-] EMBL CA332675 [ CGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTC GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCCCAACCCATCAGTTTTAACCAAGTTCAATGTTATCCTGCTGTACAGAATAAAGTTTGGCTT ]
[-] EMBL CA331415 [ CGTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTT GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCCCAACCCATCAGTTTTAACCAAGTTCAATGTTATCCTGCTGTACAGAATAAAGTTTGGCTTGGAAGAA ]
[+] EMBL CA332788 [ GTGCCCAGAACACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAAATGCTGTTGCTCAATGGATGCCCACTGGAGGAT ]
[+] EMBL FR0055254 [ ACACTCACACCCGTTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAATGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGCAGTTGTTGGAAGGCTTCTC GGACGCAAGGTTCACGGCTCTCTGGTCCGTGCTGGAATAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGATTCAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACACCAGACGCATTGTCAATGTCGTCCCTATCTTTGGTAAGATGAAGGGAGCCAATGCTAACTCCTACGTGCTATTGATGTCCTGAGGAGTGGCCTCAACCCATCAGTTTTAACCAAGTTCAATGTTATCCTGCTGTACAGCATAAAGTTTGACTTGt ]
[+] EMBL FR0055232 [ ACTCACACCC TTGAGGTGACCGGACAGGAGACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTC GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCCCAACCCATCAGTTTTAACCAAGTTCAATGTTATCCTGCTGTACAGAATAAAGTTTGGCTT ]
[+] EMBL FR0056426 [ CC TTGGGGTGACCGGACAGGATACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAAGTGCTGTTGCTCAATGGGTGCCCACTGCAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGGA ]
[+] EMBL FR0056336 [ ACCGTTGGGGAGATCAAGGCTCATGCTGAGAGTCTGGAGGGTCTCCTCGCTGAGGACCAGGTGCTGTTGCTCAATGGGTGCCCACTGGAGGATGGTGTCTCTCTGGCATCCTGTGGAGTTTCAGAGCACTGCACCCTGGAAGTTGTTGGCAGGCTTCTC GGAGGCAAGGTTCACGGCTCTCTGGCCCGTGCTGGAAAAGTGAGGGGACAAACCCCCAAGGTTGACAAGCAGGAGAAGAAGAAAAAGAAGACTGGCCGTGCGAAGCGTCGCATCCAGTACAACAGACGCTTTGTCAATGTCGTCCCTACCTTTGGAAAGAAGAAGGGACCCAATGCTAACTCCTAGGTGCTATTGATGCCCTGAGGAGTGGCCCCAACCCATCAGTTTTAACCAAGTTCAATGTTATCCTGCTGTA ]
[+] EMBL FR0056988 [ ATCAGTTTTAACCAAGTTCAATGTTATCCTGCTGTACAGAAT AAGTTTGGCTTGGAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCGGGGGGGGCCCGGAAAAAAATTTTT]
clustalw multiple alignements is not computed in this case |
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |