|
These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2763#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 501 fasta sequence
[TGTTCAAACGCTTCGTCGAGATCGGTCGCGTTGCCTACATATCTTT-TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA-GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG-ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA-GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTGTTAANAAGGGAAAAAAAAAAAAAAAAAAACCCCCGGGGGGGGCCCGGGCCCCAATTTTTG]
[+] EMBL TRU310911 [TGTTCAAACGCTTCGTCGAGATCGGTCGCGTTGCCTACATATCTTT TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATC ]
[+] EMBL CA845161 [ CGCTTCGTCGAGATCGGTCGCGTTGCCTACATATCTTT TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTG ]
[+] EMBL CA846812 [ TCGAGATCGGTCGCGTTGCCTACATATCTTT TGGACCCCATGCTGGCAAGCTGGCGGACATTGTACATGTCATCTACCAAAATCAAGCTCTTGATGACGGCCCATGCACAGATGTGACGAGACAG ]
[+] EMBL CA847172 [ CGAGATCGGTCGCGTTGCCTACATATCTTT TGGACCCTATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATT ]
[+] EMBL CA340962 [ TACATATCTTTCTGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTG ]
[+] EMBL CA845499 [ TACATATCTTT TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGATTTTAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAAT ]
[+] EMBL FR0057434 [ ATATCTTT TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACACTCAGGAAATAAATCTCTTGTTCAATTGTTCANAAGGGAAAAAAAAAA ]
[+] EMBL FR0055888 [ TATCTTT TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGTCTGGGAGAAGGCTGAAGTCAATCATGAAGTGGGCACAACGCAGTTGGGCCAAGAAGAATCGAGGCCAGACAGAAGAGGGCCAAAATGAGTGACTTTGATCGCTACAAGGCGATGAATGCCAAGAGGATGAGGAACAAGATCATCAAGCATGCGGTGAAGAAGCct ]
[+] EMBL CA846421 [ CTTT TGGACCCCATCCTGGAAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTGTTAA ]
[+] EMBL FR0062317 [ TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGAGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAAGGAAGTGAAC ]
[+] EMBL CA847030 [ gaCCCTTGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAAT ]
[+] EMBL CA330445 [ AGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAAT ]
[+] EMBL CA330542 [ GGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATT ]
[+] EMBL FR0056843 [ TGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAACCCCCGGGGGGGGCCCGGGCCCCAATTTTTG]
[+] EMBL CA845254 [ AAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTGTTAA AAAAAAAAA ]
[+] EMBL CA844979 [ TTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTGTT ]
[+] EMBL CA341157 [ AAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAA ]
[+] EMBL CA330548 [ GAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAAT ]
clustalw multiple alignements is not computed in this case |
|||||||
| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |