These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2763#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 501 fasta sequence [TGTTCAAACGCTTCGTCGAGATCGGTCGCGTTGCCTACATATCTTT-TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA-GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG-ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA-GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTGTTAANAAGGGAAAAAAAAAAAAAAAAAAACCCCCGGGGGGGGCCCGGGCCCCAATTTTTG] [+] EMBL TRU310911 [TGTTCAAACGCTTCGTCGAGATCGGTCGCGTTGCCTACATATCTTT TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATC ] [+] EMBL CA845161 [ CGCTTCGTCGAGATCGGTCGCGTTGCCTACATATCTTT TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTG ] [+] EMBL CA846812 [ TCGAGATCGGTCGCGTTGCCTACATATCTTT TGGACCCCATGCTGGCAAGCTGGCGGACATTGTACATGTCATCTACCAAAATCAAGCTCTTGATGACGGCCCATGCACAGATGTGACGAGACAG ] [+] EMBL CA847172 [ CGAGATCGGTCGCGTTGCCTACATATCTTT TGGACCCTATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATT ] [+] EMBL CA340962 [ TACATATCTTTCTGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTG ] [+] EMBL CA845499 [ TACATATCTTT TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGATTTTAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAAT ] [+] EMBL FR0057434 [ ATATCTTT TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACACTCAGGAAATAAATCTCTTGTTCAATTGTTCANAAGGGAAAAAAAAAA ] [+] EMBL FR0055888 [ TATCTTT TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGTCTGGGAGAAGGCTGAAGTCAATCATGAAGTGGGCACAACGCAGTTGGGCCAAGAAGAATCGAGGCCAGACAGAAGAGGGCCAAAATGAGTGACTTTGATCGCTACAAGGCGATGAATGCCAAGAGGATGAGGAACAAGATCATCAAGCATGCGGTGAAGAAGCct ] [+] EMBL CA846421 [ CTTT TGGACCCCATCCTGGAAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTGTTAA ] [+] EMBL FR0062317 [ TGGACCCCATGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGAGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAAGGAAGTGAAC ] [+] EMBL CA847030 [ gaCCCTTGCTGGCAAGCTGGTGGCCATTGTAGATGTCATCGACCAAAATCGAGCTCTTGTTGACGGCCCATGCACAGATGTGAGGAGACAGGCCATGCCATTTAAGTGCATGCAGCTCACAGACTACGTCATCAAAGTCCCTCACAGTGCACGCCAGAAGTATGTGAGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAAT ] [+] EMBL CA330445 [ AGGAGGGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAAT ] [+] EMBL CA330542 [ GGCCTGGGAGAAGGCTGAAGTCAATCA GAAGTGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATT ] [+] EMBL FR0056843 [ TGGGCACAAAGCAGTTGGGCCAAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAACCCCCGGGGGGGGCCCGGGCCCCAATTTTTG] [+] EMBL CA845254 [ AAGAAG ATCGAGGCCAGACAGAAGAGGGCGAAAATGAGTGACTTTGATCGCTACAAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTGTTAA AAAAAAAAA ] [+] EMBL CA844979 [ TTTGATCGCTACAAAGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAATTGTT ] [+] EMBL CA341157 [ AAGGCGATGAAGGCCAAGAGGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAA ] [+] EMBL CA330548 [ GAAGCTGCAGAAGGAGGCAGCAAA GAAGTGAACAATCAGAAAATAAATCTCTTGTTCAAT ] clustalw multiple alignements is not computed in this case |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |