cluster # 2766

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Takifugu rubripes
cluster # 2766 cluster # 2766 Sequences # 18 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2766#0 length = 870 sequences # 12

consensus_2766#1 length = 636 sequences # 5
consensus_2766#2 length = 522 sequences # 1

consensusID : consensus_2766#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 870
fasta sequence

                              [CGCTTCAGGCTAATTCTCCCTCTCTGTTCAGTTCACAGCTCATCTGTCCACCTGAAGACCATGAATCCTGCAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCA-GCGCCCGCTCGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGACACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT-GAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGCACCGAGTATCTGGGGGAGCTCAAGGCTTTGATGGAGCAGAACAGCGACGATGTCCGCGGCCGCATGAGCACCTACACCAATAAGCTGAAGAAGCGTCTCAACAAGGACGCTGAGCAGATCCACAACACCATCGCCACCTACATGGGTGAAATCCAGCTTCGCACCTCCCAGAATCTGGAGAACATGAGGGGCCAGTTCGAGCCTTACCTTCAGCAGGGCGGCGACACCGCTAGCAAGAAGATGACCGACCTCTCCACCGTGCTGGGCAGCCAGGCGGAGAGCCTGGGACAGCAGCTGGAGACCCAGGTTGAAGACCTCAAGACCAGGCTGGAAGTGACCGCCCAGGAGCTGCGTACCTCTCTGGAGGGCAAGATGGATGAGCTGAAGGATCTGCTCTCTCCATACGCCACCCAGATCCGTGAGAATTTTGAAAGCATGGTGGACAAGTTC]

[+] EMBL BU806916             [CGCTTCAGGCTAATTCTCCCTCTCTGTTCAGTTCACAGCTCATCTGTCCACCTGAAGACCATGAATCCTGCAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCA GCGCCCGCTCGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCTCGTACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGACACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT GAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGCACCGAGTATCTGGGGGAGCTCAAGGCTTTGATGGAGCACAACAGCGACGATGTCCGCGGCCGCATGAGCACCTACACCAATAAGCTGAAGAAGCGTCTCAACAAGGACGCTGAGCAGATCCCACACACCATC                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA330815             [                                    AGCTCATCTGTCCACCTGAAGACCATGAATCCTGCAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCA GCGCCCGCTCGGTTCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGACACTCTGATTACTGACTCCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT GAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGCACCGAGTATCTGGGGGAGCTCAAGGCTTTGATGGAGCAGAACAGCGACGATGTCCGCGGCCGCATGAGCACCTACACCAATAAGCTGAAGAAGCGTCTCAACAAGGACGCTGAGCAGATCCACAACACCATCGCCACCTACATGGGTGAAATCCAGCTTCGCACCTCCCAGAATCTGGAGAACATGAAGGGCCAGTTCGAGCCTTACCTTCAGCAGGGCGGCGACACCGCTAGCAAGAAGATGACCGAC                                                                                                                                                                                                         ]
[+] EMBL FR0057578            [                                     GCTCATCTGTCCACCTGAAGACCATGAATCCTGCAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCA GCGCCCGCTCGGTTCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGACACTCTGATTACTGACACCATGGGCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCACAGTGGGGCCCTACACT GAGAGGTCCAGCGGCCAGCTGTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA845044             [                                         ATCTGTCCACCTGAAGACCATGAATCCTGCAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCA GCGCCCGCTCGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGACACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT GAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGCACCGAGTATCTGGGGGAGCTCAAGGCTTTGATGGAGCAGAACAGCGACGATGTCCGCGGCCGCATGAGCACCTACACCAATAAGCTGAAGAAGCGTCTCAACAAGGACGCTGAGCAGATCCACAACACCATCGCCACCTACATGGGTGAAATCCAGCTTCGCACCTCCCAGAATCTGGAGAACATGAGGGGCCAGTTCGAGCCTTACCTTCAGCAGGGCGGCGACACCGCTAGCAAGAAGATGACCGAC                                                                                                                                                                                                         ]
[+] EMBL FR0058331            [                                                          CCATGAATCCTGCTTTTCTCCTTCTTGCTCTGGCGCTCATGTGCGGGTGCA GCGCCCGCTCGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGACACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT GAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCATAAGGACATGACGGACGCCAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL FR0058161            [                                                                    TGCAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCA GCGCCCGCTCGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGACACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT GAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGCACCGAGTATCTGGNGGAGCTCAAGGCTTTGATGGAGCAGAACAGCGACGATGTCCGCGGCCGCATGAGCACCTACACCAATAAGCTGAAGAAGCGTCTCAACAAGGA                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL FR0058158            [                                                                    TGCAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCA GCGCCCGCTCGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGACACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT GAGAGCTCCAGNCGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGACATGACGGACGCCANAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL FR0062874            [                                                                             CCTTCTTGCTCTGGCGCTCATCTGCGGGTGCAGGCCGCCGCTCGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGACACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT GAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTTCTGTTCAACAAGCTCCAGAAGGACATGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL FR0062861            [                                                                               TTCTTGCTCTGGCGCTCATCTGCGGGTGCA GCCGCCGCTCGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGACACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT GAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA333398             [                                                                                                                                                                                                                                             cgAATTCGGCACG  AGTGGACACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT GAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGCACCGAGTATCTGGGGGAGCTCAAGGCTTTGATGGAGCAGAACAGCGACGATGTCCGCGGCCGCATGAGCACCTACACCAATAAGCTGAAGAAGCGTCTCAACAAGGACGCTGAGCAGATCCACAACACCATCGCCACCTACATGGGTGAAATCCAGCTTCGCACCTCCCAGAATCTGGAGAACATGAGGGGCCAGTTCGAGCCTTACCTTCAGCAGGGCGGCGACACCGCTAGCAAGAAGATGACCGACCTCTCCACCGTGCTGGGCAGCCAGGCGGAGAGCCTGGGACAGCAGCTGGAGACCCAGGTTGAAGACCTCAAGACCAGGCTGGAAGTGACCGCCCAGGAGCTGCGTACCTCTCTGGAGGGCAAGATGGATGAGCTGAAGGATCTGCTCTCTCCATACGCCACCCAGATCCGTGAGAATT                       ]
[+] EMBL CA333447             [                                                                                                                                                                                                                                                                              TGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACT GAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGCACCGAGTATCTGGGGGAGCTCAAGGCTTTGATGGAGCAGAACAGCGACGATGTCCGCGGCCGCATGAGCACCTACACCAATAAGCTGAAGAAGCGTCTCAACAAGGACGCTGAGCAGATCCACAACACCATCGCCACCTACATGGGTGAAATCCAGCTTCGCACCTCCCAGAATCTGGAGAACATGAGGGGCCAGTTCGAGCCTTACCTTCAGCAGGGCGGCGACACCGCTAGCAAGAAGATGACCGACCTCTCCACCGTGCTGGGCAGCCAGGCGGAGAGCCTGGGACAGCAGCTGGAGACCCAGGTTGAAGACCTCAAGACCAGGCTGGAAGTGACCGCCCAGGAGCTGCGTACCTCTCTGGAGGGCAAGATGGATGAGCTGAAGGATCTGCTCTCTCCATACGCCACCCAGATCCGTGAGAATTTTGAAAGCATGGTGGACAAGT  ]
[+] EMBL CA847112             [                                                                                                                                                                                                                                                                                                       TACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACTCGAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGCACCGAGTATCTGGGGGAGCTCAAGGCTTTGATGGAGCAGAACAGCGACGATGTCCGCGGCCGCATGAGCACCTACACCAATAAGCTGAAGAAGCGTCTCAACAAGGACGCTGAGCAGATCCACAACACCATCGCCACCTACATGGGTGAAATCCAGCTTCGCACCTCCCAGAATCTGGAGAACATGAGGGGCCAGTTCGAGCCTTACCTTCAGCAGGGCGGCGACACCGCTAGCAAGAAGATGACCGACCTCTCCACCGTGCTGGGCAGCCAGGCGGAGAGCCTGGGACAGCAGCTGGAGACCCAGGTTGAAGACCTCAAGACCAGGCTGGAAGTGACCGCCCAGGAGCTGCGTACCTCTCTGGAGGGCAAGATGGATGAGCTGAAGGATCTGCTCTCTCCATACGCCACCCAGATCCGTGAGAATTTTGAAAGCATGGTGGACAAGTTC]




>consensus_2766#0
CGCTTCAGGCTAATTCTCCCTCTCTGTTCAGTTCACAGCTCATCTGTCCACCTGAAGACC
ATGAATCCTGCAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCAGCGCCCGCTCG
GTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAG
TACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAG
ATCAGCAGGGAGCTGGACACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAA
GATGAGGTCCAGAGCAGAGTGGCGCCCTACACTGAGAGCTCCAGCGGCCAGCTGTCTCAG
GACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGC
ACCGAGTATCTGGGGGAGCTCAAGGCTTTGATGGAGCAGAACAGCGACGATGTCCGCGGC
CGCATGAGCACCTACACCAATAAGCTGAAGAAGCGTCTCAACAAGGACGCTGAGCAGATC
CACAACACCATCGCCACCTACATGGGTGAAATCCAGCTTCGCACCTCCCAGAATCTGGAG
AACATGAGGGGCCAGTTCGAGCCTTACCTTCAGCAGGGCGGCGACACCGCTAGCAAGAAG
ATGACCGACCTCTCCACCGTGCTGGGCAGCCAGGCGGAGAGCCTGGGACAGCAGCTGGAG
ACCCAGGTTGAAGACCTCAAGACCAGGCTGGAAGTGACCGCCCAGGAGCTGCGTACCTCT
CTGGAGGGCAAGATGGATGAGCTGAAGGATCTGCTCTCTCCATACGCCACCCAGATCCGT
GAGAATTTTGAAAGCATGGTGGACAAGTTC

consensusID : consensus_2766#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 636
fasta sequence

                              [GCTCAGTTCACAGCTCATCTGTCCACCTGAAGGATCTGCTCTCTCCATACGCCACCCAGATCCGTGAGAATTTTGAAAGCATGGTGGACAAGTTCAAGGAGACGGACACTAACTAGGTGAAGAGACTTTGAGGGTTTAGATGGTGGGTGCTCCTTTACTGCCACAGAGGCGGTAAAGGGCGGCTTAAGAGTTACTCCTTTTTCATGTGGGTGTTGTGTTCAGACCGATGGAGATGATGAGATGAGCTGGGCTTGGTGGTCAGACTGGGATGTTCTGCTCACTTTCCTCTCGTCGCCTCCCTTGACTGGACACAAGCATCCTGATCAAACATAAGACAGAAAAGAAAACTCTGTATTTTTCTTTACTTTGCTTCACTTTGTGGAATGAACACATCTAGTTAGCTCAGCCTCCAGGTTCGTGTCTGTGGTCATGTGTGGTCCTAGTTGGGCCCAGTCGCACCCGTGGCATTATTTCAAAAATGCACTGATTTTTTAAAGTGATGAGGAAGCATCGTGTCCTTCCTGATGTACCTTCTTCATTTCAAAACGACTTCTGCCATGAATGAGTTGTTTACTGTAACGTGGCTCCACCGTGTGTTGGACATGTCAGTGTGATCAGAGAATAAAGAACCCAAAC]

[+] EMBL FR0055704            [GCTCAGTTCACAGCTCATCTGTCCACCTGAAGGATCTGCTCTCTCCATACGCCACCCAGATCCGTGAGAATTTTGAAAGCATGGTGGACAAGTTCAAGGAGACGGACACTAACTAGGTGAAGAGACTTTGAGGGTTTAGATGGTGGGTGCTCCTTTACTGCCACAGAGGCGGTAAAGGGCGGCTTAAGAGTTACTCCTTTTTCATGTGGGTGTTGTGTTCAGACCGATGGAGATGATGAGATGAGCTGGGCTTGGTGGTCAGACTGGGATGTTCTGCTCACTTTCCTCTCGTCGCCTCCCTTGACTGGACACAAGCATCCTGATCAAACATAAGACAGAACAGAAAACTCTGTATTTTTCTTTACTTTGCTTCACTTTGTGGAATGAACACATCTAGTTAGCTCAGCCTCCAGGTTCGTGTCTGTGGTCATGTGTGGTCCTAGTTGGGCCCAGTCGCACCCGTGGCATTATTTCANCAATGCACTGATTTTTTACA                                                                                                                                            ]
[+] EMBL CA844787             [                                                                                                                                                        CTTTACTGCCACAGAGGCGGTAAAGGGTGGCTTAAGAGTTACTCCTTTTTCATGTGGGTGTTGTGTTCAGACCGATGGAGATGATGAGATGAGCTGGGCTTGGTGGTCAGACTGGGATGTTCTGCTCACTTTCCTCTCGTCGCCTCCCTTGATTGGATACTTGCATCCTGATCAAACATAAGACAGAAAAGAAAACTCTGTATTTTTCTTTACTTTGCTTCACTTTGTGGAATGAACACATCTAGTTAGCTCAGCCTCCAGGTTCGTGTCTGTGGTCATGTGTGGTCCTAGTTGGGCCCAGTCGCACCCGTGGCATTATTTCAAAAATGCACTGATTTTTTAAAGTGATGAGGAAGCATCGTGTCCTTCCTGATGTACCTT                                                                                                       ]
[+] EMBL FR0056643            [                                                                                                                                                                                                                                              AGATGAGCTGGGCTTGGTGGTCAGACTGGGATGTTCTGCTCACTTTCCTCTCGTCGCCTCCCTTGACTGGACACAAGCATCCTGATCAAACATAAGACAGAAAAGAAAACTCTGTATTTTTCTTTACTTTGCTTCACTTTGTGGAATGAACACATCTAGTTAGCTCAGCCTCCAAGTTCGTGTCTGTGGTCATGTGTGGTCCTAGTTGGGCCCAGTCGCACCCGTGGCATTATTTCAAAAATGCACTGATTTTTTAAAGTGATGAGGAAGCATCGTGTCCTTCCTGATGTACCTTCTTCATTTCAGGATGACTTCTGCC                                                                               ]
[+] EMBL CA330015             [                                                                                                                                                                                                                                                                                                                                                                            CTTTGCTTCACTTTGTGGAATGAACACATCTATTTAGCTCAGCCTCCAAGTTCGTGTCTGTGGTCATGTGTGGTCCTAGTTGGGCCCAGTCGCACCCGTGGCATTATTTCAAAAATGCACTGATTTTTTAAAGTGATGAGGAAGCATCGTGTCCTTCCTGATGTACCTTCTTCATTTCAAAACGACTTCTGCCATGAATGAGTTGTTTACTGTAACGTGGCTCCACCGTGTGTTGTTTTTGTCAGTGTGATCAGAGAATAAAGAACCCAAA ]
[+] EMBL CA845680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAAAACGACTTCT TTATGAATGAGTTGTTTACTGTAACGTGGCTCCACCGTGTGTTGGACATGTCAGTGTGATCAGAGAATAAAGAACCCAAAC]




>consensus_2766#1
GCTCAGTTCACAGCTCATCTGTCCACCTGAAGGATCTGCTCTCTCCATACGCCACCCAGA
TCCGTGAGAATTTTGAAAGCATGGTGGACAAGTTCAAGGAGACGGACACTAACTAGGTGA
AGAGACTTTGAGGGTTTAGATGGTGGGTGCTCCTTTACTGCCACAGAGGCGGTAAAGGGC
GGCTTAAGAGTTACTCCTTTTTCATGTGGGTGTTGTGTTCAGACCGATGGAGATGATGAG
ATGAGCTGGGCTTGGTGGTCAGACTGGGATGTTCTGCTCACTTTCCTCTCGTCGCCTCCC
TTGACTGGACACAAGCATCCTGATCAAACATAAGACAGAAAAGAAAACTCTGTATTTTTC
TTTACTTTGCTTCACTTTGTGGAATGAACACATCTAGTTAGCTCAGCCTCCAGGTTCGTG
TCTGTGGTCATGTGTGGTCCTAGTTGGGCCCAGTCGCACCCGTGGCATTATTTCAAAAAT
GCACTGATTTTTTAAAGTGATGAGGAAGCATCGTGTCCTTCCTGATGTACCTTCTTCATT
TCAAAACGACTTCTGCCATGAATGAGTTGTTTACTGTAACGTGGCTCCACCGTGTGTTGG
ACATGTCAGTGTGATCAGAGAATAAAGAACCCAAAC

consensusID : consensus_2766#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 522
fasta sequence

                              [CAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCAGCGCCCGCTCGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGAGTAAGTCAGGACTTCTTACATTCAAGCTTTCTTGGTCTTTGAATCTCTGCATCTTCTGAATCCACCGACTGATGTTCCAGCACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACTGAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAGCAGGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGCACCGAGTATCTGGGGGAGCTCAGGGCTTTGATGGGGCAGAACAGCGACGATGTCCGGGGCGCATGAGCACCTACACACTAAGCTGAAGAAGG]

[+] EMBL FR0056778            [CAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCAGCGCCCGCTCGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGGAGCTGGAGTAAGTCAGGACTTCTTACATTCAAGCTTTCTTGGTCTTTGAATCTCTGCATCTTCTGAATCCACCGACTGATGTTCCAGCACTCTGATTACTGACACCATGGCCGAGCTGACCAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACTGAGAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAGCAGGCTCCAGAAGGACATGACGGACGCCAAAGTGCGCAGCACCGAGTATCTGGGGGAGCTCAGGGCTTTGATGGGGCAGAACAGCGACGATGTCCGGGGCGCATGAGCACCTACACACTAAGCTGAAGAAGG]




>consensus_2766#2
CAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCAGCGCCCGCTCGGTGCCCCTGG
CCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGCAGTACATCACGG
ACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATCAGATCAGCAGGG
AGCTGGAGTAAGTCAGGACTTCTTACATTCAAGCTTTCTTGGTCTTTGAATCTCTGCATC
TTCTGAATCCACCGACTGATGTTCCAGCACTCTGATTACTGACACCATGGCCGAGCTGAC
CAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCGCCCTACACTGAGAGCTCCAGCGGCCA
GCTGTCTCAGGACATGCAGCTCCTGTTCAGCAGGCTCCAGAAGGACATGACGGACGCCAA
AGTGCGCAGCACCGAGTATCTGGGGGAGCTCAGGGCTTTGATGGGGCAGAACAGCGACGA
TGTCCGGGGCGCATGAGCACCTACACACTAAGCTGAAGAAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2766#0      CGCTTCAGGCTAATTCTCCCTCTCTGTTCAGTTCACAGCTCATCTGTCCACCTGAAGACC 60
consensus_2766#2      ------------------------------------------------------------
consensus_2766#1      -------------------------GCTCAGTTCACAGCTCATCTGTCCACCTGAAGGAT 35
                                                                                  

consensus_2766#0      ATGAATCCTGCAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCAGCGCCC--GCT 118
consensus_2766#2      ----------CAGCTCTCCTTCTTGCTCTGGCGCTCATCTGCGGGTGCAGCGCCC--GCT 48
consensus_2766#1      CTGCTCTCTCCA-TACGCCACCCAGATCCGTGAGAATTTTGAAAGCATGGTGGACAAGTT 94
                                **   * **  *  * ** *       * **   *    * *  *  * *

consensus_2766#0      CGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGC 178
consensus_2766#2      CGGTGCCCCTGGCCCCGGCCCAGCCGGACCACTGGCAGGGCGTCGTCAACCGCTTCTGGC 108
consensus_2766#1      CAAGGAGACGGACACTAACTAGGTGAAGAGACTTTGAGGGTTTAGATGGTGGGTGCTCCT 154
                      *   *   * * * *   *   *       ***   ****  * *      * * **   

consensus_2766#0      AGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATC 238
consensus_2766#2      AGTACATCACGGACCTGAGCCAACAAACTGATGACGTGGTGAAGACCCTCAAGACTCATC 168
consensus_2766#1      TTACTGCCACAGAG--GCGGTAAAGGGCGGCTTAAGAGTTACTCCTTTTTCATGTGGGTG 212
                             *** **   * *  **    * * * * * * *        *  *      * 

consensus_2766#0      AGATCAGCAGGGAGCTGGA----------------------------------------- 257
consensus_2766#2      AGATCAGCAGGGAGCTGGAGTAAGTCAGGACTTCTTACATTCAAGCTTTCTTGGTCTTTG 228
consensus_2766#1      TTGTGTTCAGACCGATGGAGATGATGAGATGAGCTGGGCTTGGTG--------------- 257
                         *   ***   * ****                                         

consensus_2766#0      ---------------------------------------CACTCTGATTACTGACACCAT 278
consensus_2766#2      AATCTCTGCATCTTCTGAATCCACCGACTGATGTTCCAGCACTCTGATTACTGACACCAT 288
consensus_2766#1      ------------------GTCAGACTGGGATGTTCTGCTCACTTTC-CTCTCGTCGCCTC 298
                                                             **** *   *   * * **  

consensus_2766#0      GGCCGAGCTGAC-CAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCG--CCCTACACTGA 335
consensus_2766#2      GGCCGAGCTGAC-CAAGTACAAAGATGAGGTCCAGAGCAGAGTGGCG--CCCTACACTGA 345
consensus_2766#1      CCTTGACTGGACACAAGCATCCTGATCAAACATAAGACAGAAAAGAAAACTCTGTATTTT 358
                          **   *** **** *    *** *     *   ****   *    * **  * *  

consensus_2766#0      GAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAACAAGCTCCAGAAGGA 395
consensus_2766#2      GAGCTCCAGCGGCCAGCTGTCTCAGGACATGCAGCTCCTGTTCAGCAGGCTCCAGAAGGA 405
consensus_2766#1      TCTTTACTTTGCTTCACTTTGT-GGAATGAACACATCTAGTTAGCTCAGCCTCC-AGGTT 416
                          * *   *     ** * *  * *    **  **  ***      **  *  * *  

consensus_2766#0      CATGACGGACGCCAAAGTGCGCAGCACCGAGTA--TCTGGGGGAGCTCAAGGCTTTGATG 453
consensus_2766#2      CATGACGGACGCCAAAGTGCGCAGCACCGAGTA--TCTGGGGGAGCTCAGGGCTTTGATG 463
consensus_2766#1      CGTGTCTGTGGTCA---TGTGTGGTCCTAGTTGGGCCCAGTCGCACCCGTGGCATTATTT 473
                      * ** * *  * **   ** *  *  *    *    *  *  *  * *  *** **  * 

consensus_2766#0      GAGCAGAACAGCGACGATGTCCGCGGCCGCATGAGCACCTACACCAATAAGCTGAAGAAG 513
consensus_2766#2      GGGCAGAACAGCGACGATGTCCG-GGGCGCATGAGCACCTACAC-ACTAAGCTGAAGAAG 521
consensus_2766#1      CAAAAATGCACTGATTTTTTAAAGTGATGAGGAAGCATCGTGTCCTTCCTGATGTACCTT 533
                          *   **  **   * *     *  *    **** *    *      * ** *    

consensus_2766#0      CGTCTCAACAAGGACGCTGAGCAGATCCACAACACCATCGCCACCTACATGGGTGAAATC 573
consensus_2766#2      G----------------------------------------------------------- 522
consensus_2766#1      CTTCATTTCAAAACGACTTCTGCCATGAATGAGTTGTTTACTGTA-ACGTGGCTCCA-CC 591
                                                                                  

consensus_2766#0      CAGCTTCGCACCTCCCAGAATCTGGAGAACATGAGGGGCCAGTTCGAGCCTTACCTTCAG 633
consensus_2766#2      ------------------------------------------------------------
consensus_2766#1      GTGTGTTGGACATGTCAGTGTGATCAGAGAATAAAGAACCCAAAC--------------- 636
                                                                                  

consensus_2766#0      CAGGGCGGCGACACCGCTAGCAAGAAGATGACCGACCTCTCCACCGTGCTGGGCAGCCAG 693
consensus_2766#2      ------------------------------------------------------------
consensus_2766#1      ------------------------------------------------------------
                                                                                  

consensus_2766#0      GCGGAGAGCCTGGGACAGCAGCTGGAGACCCAGGTTGAAGACCTCAAGACCAGGCTGGAA 753
consensus_2766#2      ------------------------------------------------------------
consensus_2766#1      ------------------------------------------------------------
                                                                                  

consensus_2766#0      GTGACCGCCCAGGAGCTGCGTACCTCTCTGGAGGGCAAGATGGATGAGCTGAAGGATCTG 813
consensus_2766#2      ------------------------------------------------------------
consensus_2766#1      ------------------------------------------------------------
                                                                                  

consensus_2766#0      CTCTCTCCATACGCCACCCAGATCCGTGAGAATTTTGAAAGCATGGTGGACAAGTTC 870
consensus_2766#2      ---------------------------------------------------------
consensus_2766#1      ---------------------------------------------------------

Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr)