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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2796#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1222 fasta sequence
[ACTCTCAGGGGTTTGCCTCTTTGCTCTGCTGATTGGGGACATATGCTGTGTCCCTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTACGACCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCCGAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTGCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTCCCCAGTCTGGCCATTACCCGCTTGGAAGTGTTTCTGAAGGTGGATCTTCACCATACAATTATCCTGAAATGAAGCCTGGATATGATCAACCCAGTGAATATATAAGGCCGCCCATACCACAACCAGCGTACCAGGGAGGAGAGCTGACTCATTATGAGGACTCTGCTGAACATGGGTTCTATGAGCGGGAATCAGATGAGCAAGGTCAATTCCCTCATCCTCCCCATATCTTTGCATCCCCTAAAATGGTCTCGTCCAGTATGCCACATCCATTGCCGCCACATCCATTGCCGCCACGTCCAGTGCTGCCACATTGGGGTTTCTATCCATACTACTATGACTACAGGTTCATAACAGGCCAGTATCCTCCAGGCACTTACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTGTTGCAGAGTCGGGAGCCTCTACGTCCTCTGTAGCTTCTCTGCCTGGGAAGGTTCCTGTGGTTTATACTGGACACTGAGCTGCTGCTTGACTCTGCTTCATTCTGACCTGATGGTGGCATCAATCTTCACAGGGGTTCAATGTATGAAATAACATTTGCTTGTCTGAATTCTGCTGAACTCAATAAAAGCTGACTATTTTGGCT]
[+] EMBL CA844546 [ACTCTCAGGGGTTTGCCTCTTTGCTCTGCTGATTGGCCTCATATGCTGTGTCCCTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGTCCTACGACCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTATGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTTACGGTCTCGAGCCTGGCCCCGAGCCTGGTCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCTGGTTTCGGCCCCCA ]
[+] EMBL CA844691 [ TCTCAGGGGTTTGCCTCTTTGCTCTGCTGATTGGCTTAATATGCTGTGTCCCTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTACGACCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCCGAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTGCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTCCCCAGTCTGGCCATTACCCGCTTGGAAGTGTTTCTGAAGGTGGATCTTCACCATACAATTATCCTGAAATGAAGCCTGGATATGATCAACCCAGTGAATATATAAGGCCGCCCATACCACAACCAGCGTACCAGG ]
[+] EMBL CA846488 [ CTCAGGGGTTTGCCTCTTTGCTCTGCTGATTGGGGAC TATGCTGTGTCCCTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTACGACCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCCGAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCT ]
[+] EMBL CA846553 [ TAAGGGGTTTGCCTCTTTGCTCTGCTGATTGGGGAC TCTTCTGTGTCCCTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTACTACCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTTACGGCCCCTATTTTGGCCCCGAGCCTGGCCCGCGTTCTGTGCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTA ]
[+] EMBL CA846498 [ GCCTCTTTGCTCTGCTGATTGGGGACATATGCTGTGTCCCTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGC ]
[+] EMBL CA847207 [ CCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCCGAGCCTGGTCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCTGGTTTCAGCCCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTGCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTCCCCAGTCTGGCCATTACCCACTTGGAAGTGTTTCTGAAGGTGGATCTTCACCATACAATTATCCTGAAATGAAGCCTGGATATGATCAACCCAGTGAATATATAAGGCCGCCCATACCACAACCAGCGTACCAGGGAGGAGAGCTGACTCATTATGAGGACTCTGCTGAACATGGGTTCTATGAGCGGGAATCAGATGAGCAAGGTCAATTCCCTCATCCTCCCCATATCTTTGCATCCCCTAAAATGGTCTCGTCCAGTATGCCACATCCATTGCCGCCACATCCATTGCCGCCACGTCCAGTGCTGCCACATTGGGGTTTCTATCCATACTACTATGACTACAGGTTCATAACAGGCCAGTATCCTCCAGGCACTTAC ]
[+] EMBL FR0057281 [ TATGAGGACTCTGCTGAACATGGGTTCTATGAGCGGGAATCAGATGAGCAAGGTCAATTCCCTCATCCTCCCCATATCTTTGCATCCCCTAAAATGGTCTCGTCCAGTATGCCACATCCATTGCCGCCACATCCATTGCCGCCACGTCCAGTGCTGCCACATTGGGGTTTCTATCCATACTACTATGACTACAGGTTCATAACAGGCCAGTATCCTCCAGGCACTTACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTGTTGCAGAGTCGGGAGCCTCTACGTCCTCTGTAGCTTCTCTGCCTGGGAAGGTTCCTGTGGTTTATACTGGACACTGAGCTGCTGCTTGACTCTGCTTCATTCTGACCTGATGGTGGCATCAATCTTCACAGGGGTTCAGT ]
[+] EMBL CA844576 [ CCACATCCATTGCCGCCACATCCATTGCCGCCACCCTTAGAGCTGCCACATTGGGGTTTCTATCCATACTACTATGACTACAGGTTCATAACAGGCCAGTATCCTCCAGGCACTTACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTGTTGCAGAGTCGGGAGCCTCTACGTCCTCTGTAGCTTCTCTGCCTGGGAAGGTTCCTGTGGTTTATACTGGACACTGAGCTGCTGCTTGACTCTGCTTCATTCTGACCTGATGGTGGCATCAATCTTCACAGGGGTTCAATGTATGAAATAACATTTGCTTGTCTGAATTCTGCTGAACTCAATAAAAGCTGACTATTTTG ]
[+] EMBL CA844770 [ CAGTATCCTCCAGGCACTTACACCCATGCGAGTGCCTACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTGTTGCAGAGTCGGGAGCCTCTACGTCCTCTGTAGCTTCTCTGCCTGGGAAGGCTCCTGTGGTTTATACTGGACACTGAGCTGCTGCTTGACTCTGCTTCATTCTGACCTGATGGTGGCATCAATCTTCACAGGGGTTCAATGTATGAAATAACATTTGCTTGTCTGAATTCTGCTGAACTCAATAAAAGCTGACTATTTTGGCT]
[+] EMBL CA333384 [ ACAGGGGTTCAATGTATGAAATAACATTTGCTTGTCTGAATTCTGCTGAACTCAATAAAAGCTGACTATTTTGGC ]
consensusID : consensus_2796#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence
[GAACTGGCCCCGGTTACGGCCCCGAGCCTGGCCCGCGCTCTGGACCCGGTTACGGCCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTGCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTCCCCAGTCTGGCCATTACCCACTTGGAAGTGTTTCTGAAGGTGGATCTTCACCATACAATTATCCTGAAATGAAGCCTGGATATGATCAACCCAGTGAATATATAAGGCCGCCCATATTTTAACCAGCGTACCAGGGAGGAGAGCTGACTCATTATGAGGACTCTGCTGAACATGGGTTCTATGAGCGGGAATCAGATGAGCAAGGTCAATTCCCTCATCCTCCCCATATCTTTGCATCCCCTAAAATGGTCTCGTCCAGTATGCCACATCCATTGCCGCCACATCCATTGCCGCCACGTCCAGTGCTGCCACATTGGGGCTTCTATCCATACTACTATGACTACAGGTTCATAACAGGCCAGTATCCTCCAGGCACTTACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTGTTGCA]
[+] EMBL CA844635 [GAACTGGCCCCGGTTACGGCCCCGAGCCTGGCCCGCGCTCTGGACCCGGTTACGGCCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTGCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTCCCCAGTCTGGCCATTACCCACTTGGAAGTGTTTCTGAAGGTGGATCTTCACCATACAATTATCCTGAAATGAAGCCTGGATATGATCAACCCAGTGAATATATAAGGCCGCCCATATTTTAACCAGCGTACCAGGGAGGAGAGCTGACTCATTATGAGGACTCTGCTGAACATGGGTTCTATGAGCGGGAATCAGATGAGCAAGGTCAATTCCCTCATCCTCCCCATATCTTTGCATCCCCTAAAATGGTCTCGTCCAGTATGCCACATCCATTGCCGCCACATCCATTGCCGCCACGTCCAGTGCTGCCACATTGGGGCTTCTATCCATACTACTATGACTACAGGTTCATAACAGGCCAGTATCCTCCAGGCACTTACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTGTTGCA]
consensusID : consensus_2796#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 568 fasta sequence
[CAGTGAATATATAAGGCCGCCCATACCACAACCAGCGTACCAGGGAGGAGAGCTGACTCATTATGAGGACTCTGCTGAACATGGGTTCTATGAGCGGGAATCAGATGAGCAAGGTCAATTCCCTCATCCTCCCCATATCTTTGCATCCCCTAAAATGGTCTCGTCCAGTATGCCACATCCATTGCCGCCACGTCCAGTGCTGCCACATTGGGGCTTCTATCCATACTACTATGACTACAGGTTCATAACAGGCCAGTATCCTCCAGGCACTTACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTGTTGCAGAGTCGGGAGCCTCTACGTCCTCTGTAGCTTCTCTGCCTGGGAAGGCTCCTGTGGTTTATACTGGACACTGAGCTGCTGCTTGACTCTGCTTCATTCTGGCCTGATGGTGGCATCAATCTTCACAGGGGTTCAATGTATGAAATAACATTTGCTTGTCTGAATTCAATAAAACTCAAGATTTGCCTTTAATTTTGGCAAAAAAA]
[+] EMBL FR0057263 [CAGTGAATATATAAGGCCGCCCATACCACAACCAGCGTACCAGGGAGGAGAGCTGACTCATTATGAGGACTCTGCTGAACATGGGTTCTATGAGCGGGAATCAGATGAGCAAGGTCAATTCCCTCATCCTCCCCATATCTTTGCATCCCCTAAAATGGTCTCGTCCAGTATGCCACATCCATTGCCGCCACGTCCAGTGCTGCCACATTGGGGTTTCTATCCATACTACTATGACTACAGGTTCATAACAGGCCAGTATCCTCCAGGCACTTACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCCAAGAAGGCATTCGCTTTGAACCTGTTGCAGAGTCGGGAGCCTCTACGTCCTCTGTAGCTTCTCTGCCTGGGAAGGGTCCTGTG ]
[+] EMBL FR0057080 [ AGGTCAATTCCCTCATCCTCCCCATATCTTTGCATCCCCTAAAATGGTCTCGTCCAGTATGCCACATCCATTGCCGCCACGTCCAGTGCTGCCACATTGGGGCTTCTATCCATACTACTATGACTACAGGTTCATAACAGGCCAGTATCCTCCAGGCACTTACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTGTTGCAGAGTCGGGAGCCTCTACGTCCTCTGTAGCTTCTCTGCCTGGGAAGGCTCCTGTGGTTTATACTGGACACTGAGCTGCTGCTTGACTCTGCTTCATTCTGGCCTGATGGTGGCATCAATCTTCACAGGGGTTCAATGTATGAAATAACATTTGCTTGTCTGAATTCTGCTGAACTCAATAAAAGCTGACTATTTTGGCAAAAAAA]
[+] EMBL CA844460 [ TACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTGTTGCAGAGTCGGGAGCCTCTACGTC CTGTAGCTTCTCTGCCTGGGAAGGCTCCTGTGGTTTATACTGGACACTGAGCTGCTGCTTGACTCTGCTTCATTCTGGCCTGATGGTGGCATCAATCTTCACAGGGGTTCAATGTATGAAATAACATTTGCTTGTCTGAATTCAATAAAACTCAAGATTTGCCTTTAA ]
[+] EMBL CA844599 [ CCTGTTGCAGAGTCGGGAGCCTCTACGTCCTCTGTACCTTCTCTGCCTGGGAAGGCTCCTGTGGTTTATACTGGACACTGAGCTGCTGCTTGACTCTGCTTCATTCTGGCCTGATGGTGGCATCAATCTTCACAGGGGTTCAATGTATGAAATAACATTTGCTTGTCTGAATTCAATAAAACTCAAGATTTGCCTTT ]
consensusID : consensus_2796#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 476 fasta sequence
[TCTCTCAGGGGTTTGCCTCTTTGCTCTGCTGATTGGGGACATATGCTGTAGTACCTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTACGACCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCGGTTACGGCCCCCAGCCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTT-TTTT-CCCGAGCCTGGCCCCGAGCCTGGTCCGCGTTCTGGGCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCGAGCCTGGCCCGGGGCCTGGGCCGGGTTACGGCCCCCAGC]
[+] EMBL CA844515 [TCTCTCAGGGGTTTGCCTCTTTGCTCTGCTGATTGCGGACATATGCTGT GTCCCTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTACGACCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCGGTTACGGCCCCCAGCCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTTACGGC CCCGAGCCTGGCCCCGAGCCTGGTCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGC]
[+] EMBL CA847187 [ GGTTTGCCTCTTTGCTCTGCTGATTGGGGACATATCTTGTAGAACCTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTACGACCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCGGTTACGGCCCCCAGCCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGTTT TTTTCCCCGAGCCTGGCCC ]
[+] EMBL CA844730 [ gacgagCTTTGCTCTGCTGATTGGGGACATATGCCGTAGTAAGTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTACGACCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCGGTTACGGCCCCCAGCCTGGCCCCGGTTATGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTT TTTT CCCGAGCCTGGCCCCGAGCCTGATCCGTGTTCTGGGCCCGGTTACGGCCCCCATCCTGGCCCGCGTTCTGGCCCTGGTTACGGCCCCGAGCCTGACCCCGAGCCTGGGCCGCGTTCTGGCC ]
consensusID : consensus_2796#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 458 fasta sequence
[GGTTTGCCTCTTTGCTCTGCCGATTGAGGGACATATGCTGAGAACCCGTCCAGAAGGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTACGAACACCAGGCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCTCAGCCTGGTCCGCGTTCTGGCCCCGGTTATGGCCCTCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCCGGTTTC]
[+] EMBL CA846383 [GGTTTGCCTCTTTGCTCTGCTGATTG GGGACATATCTTGAGAACCCGTCCAGTAGGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTA TATACCAAGCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCT ]
[+] EMBL CA846468 [ GCCTCTTTGCTCTGCCGTTTGAAGGACATATGCTGTGTCCCTGTCCAGAAAGGCAATGATCCTGCTGCATACGATGATAGCTACAGACATGCTGCTCCGAGTTACGACCCCCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCTGGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGCGTTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCTCAGCCTGGTCCGCGTTCTGGCCCCGGTTATGGCCCTCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCCGGTTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 ------------------------------------------------------------
consensus_2796#1 GAACTGGCCCCGGTTACGGCCCCGAGCCTGGCCCGCGCTCTGGACCCGGTTACGGCCCCC 60
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 ------------------------------------------------------------
consensus_2796#1 AGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCC 120
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 ------------------------------------------------------------
consensus_2796#1 AGCCTGGCCCGCGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGGCCCCCC 180
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 ------------------------------------------------------------
consensus_2796#1 CGGTGGCTGCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTCCCCAGTCTGGCCATT 240
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 -----------------------------------------------------TCTCTCA 7
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 -----------------------------------------------------ACTCTCA 7
consensus_2796#1 ACCCACTTGGAAGTGTTTCTGAAGGTGGATCTTCACCATACAATTATCCTGAAATGAAGC 300
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 GGGGTTTGCCTCTTTGCTCTGCTGATTG-GGGACATATGCTGTAGTACCTGTCCAGAAAG 66
consensus_2796#4 --GGTTTGCCTCTTTGCTCTGCCGATTGAGGGACATATGCTG-AGAACCCGTCCAGAAGG 57
consensus_2796#0 GGGGTTTGCCTCTTTGCTCTGCTGATTG-GGGACATATGCTG-TGTCCCTGTCCAGAAAG 65
consensus_2796#1 CTGGATATGATCAACCCAGTGAATATATAAGGCCGCCCATATTTTAACCAGCGTACCAGG 360
consensus_2796#2 ----------------CAGTGAATATATAAGGCCGCCCATACCACAACCAGCGTACCAGG 44
* ** ** ** * ** * * * *
consensus_2796#3 GCAATGATCCTGCTGCATACGATGATAGCTACAGACATGC-TGCTCCGAGTTACGACCC- 124
consensus_2796#4 GCAATGATCCTGCTGCATACGATGATAGCTACAGACATGC-TGCTCCGAGTTACGAACA- 115
consensus_2796#0 GCAATGATCCTGCTGCATACGATGATAGCTACAGACATGC-TGCTCCGAGTTACGACCC- 123
consensus_2796#1 GAGGAGAGCTGACTCATTATGAGGACTCTGCTGAACATGGGTTCTATGAGCGGGAATCAG 420
consensus_2796#2 GAGGAGAGCTGACTCATTATGAGGACTCTGCTGAACATGGGTTCTATGAGCGGGAATCAG 104
* ** * ** ** ** ** ***** * ** *** * *
consensus_2796#3 -CCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCGGTTACGGCCCCCAGCCTGGCC 183
consensus_2796#4 -CCAGGCTGGCCCGCGTTCTGGCCCCGG------------TTACGGCCCCCAGCCTGGCC 162
consensus_2796#0 -CCAGCCTGGCCCGCGTTCTGGCCCCGG------------TTATGGCCCCCAGCCTGGCC 170
consensus_2796#1 ATGAGCAAGGTCAATTCCCTCATCCTCCCCATATCT----TTGCATCCCCTAAAATGGTC 476
consensus_2796#2 ATGAGCAAGGTCAATTCCCTCATCCTCCCCATATCT----TTGCATCCCCTAAAATGGTC 160
** ** * ** ** ** **** * *** *
consensus_2796#3 CCGGTTATGGCCCCCAGCCTGGCCCCGGTTACGGCCCC---------CAGCCTGGCCCTG 234
consensus_2796#4 CTGGTTACGGCCC------------TGGTTTCGGCCCC---------CAGTCTGGCCAAG 201
consensus_2796#0 CCGGTTATGGCCCCCAGCCTGGCCCCGGTTACGGCCCC---------CAGCCTGGCCCTG 221
consensus_2796#1 TCGTCCAGTATGCC-------ACATCCATTGCCGCCACATCCATTGCCGCCACGTCCAGT 529
consensus_2796#2 TCGTCCAGTATGCC-------ACATCCATTGCCGCCA---------------CGTCCAGT 198
* * * ** * *** * **
consensus_2796#3 GTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCC 294
consensus_2796#4 GTTTGGCCCCCCCGGTGGCTCCCCAGTCTGGCCCTGGTTACGGCCCCGAGCCTGGCCCGC 261
consensus_2796#0 GTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGACCCCCCCGGTGGCTCCCC 281
consensus_2796#1 GCTGCCACATTGGGGCTTCTATCCATACTA-CTATGACTACAGGTTCATAACAGGCCAGT 588
consensus_2796#2 GCTGCCACATTGGGGCTTCTATCCATACTA-CTATGACTACAGGTTCATAACAGGCCAGT 257
* * * *** ** * * * * * *
consensus_2796#3 AGTCTGGCCCTGGTTACGGCCC--CGAGC-CTGGCCCGCGTTCTGGCCCTGGTTTTTTCC 351
consensus_2796#4 GTTCTGGCCCTGGTTACGGCCC--CGAGC-CTGGCCCTCAGCCTGGTCCGCGTTCTGGCC 318
consensus_2796#0 AGTCTGGCCCTGGTTACGGCCC--CGAGC-CTGGCCCGCGTTCTGGCCCTGGTTACGGCC 338
consensus_2796#1 ATCCTCCAGGCACTTACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGC 648
consensus_2796#2 ATCCTCCAGGCACTTACACCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGC 317
** **** ** **** * * *** * * *
consensus_2796#3 CGAGC---C-TGGCCCCGAGCCTGGTCCGCGTTCTGGGCCCGGTTACGGCCCCCAGCCTG 407
consensus_2796#4 CCGGT---TATGGCCCTCAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTG 375
consensus_2796#0 CCGAG---CCTGGCCCCGAGCCTGGCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTG 395
consensus_2796#1 AGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTG-TTGCA------------ 695
consensus_2796#2 AGGACGTCCACTACCGCCAAGAAGGCATTCCCTTTGAACCTG-TTGCAGAGTCGGGAGCC 376
** * ** * * ** ** * ** *
consensus_2796#3 GCCCGCGTTCTGGCCCCGGTTACGGCCCCGAGCCTGGCCCGGGGCCTGGGCCGGGTTACG 467
consensus_2796#4 GCCCGCGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTGGCCCCGGTTACG 435
consensus_2796#0 GCCCGCGTTCTGGCCCCGGTTACGGCCCCCAGCCTGGCCCGCGTTACGGCCCCCAGCCTG 455
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 -TCTACGTCCTCTGTAGCTTCTCTGCCTGGGAAGGCTCCTGTGGTTTATACTGGACACTG 435
consensus_2796#3 GCCCCCAGC--------------------------------------------------- 476
consensus_2796#4 GCCCCCAGCCTGGCCCCGGTTTC------------------------------------- 458
consensus_2796#0 GCCCGCGTTACGGCCCTGGTTTCGGCCCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGG 515
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 AGCTGCTGCTTGACTCTGCTTCATTCTGGCCTGATGGTGGCATCAATCTTCACAGGGGTT 495
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 CTGCCCAGTCTGGCCAAGGTTTGGCCCCCCCGGTGGCTCCCCAGTCTGGCCATTACCCGC 575
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 CAATGTATGAAATAACATTTGCTTGTCTGAATTCAATAAAACTCAAGATTTGCCTTTAAT 555
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 TTGGAAGTGTTTCTGAAGGTGGATCTTCACCATACAATTATCCTGAAATGAAGCCTGGAT 635
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 TTTGGCAAAAAAA----------------------------------------------- 568
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 ATGATCAACCCAGTGAATATATAAGGCCGCCCATACCACAACCAGCGTACCAGGGAGGAG 695
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 AGCTGACTCATTATGAGGACTCTGCTGAACATGGGTTCTATGAGCGGGAATCAGATGAGC 755
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 AAGGTCAATTCCCTCATCCTCCCCATATCTTTGCATCCCCTAAAATGGTCTCGTCCAGTA 815
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 TGCCACATCCATTGCCGCCACATCCATTGCCGCCACGTCCAGTGCTGCCACATTGGGGTT 875
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 TCTATCCATACTACTATGACTACAGGTTCATAACAGGCCAGTATCCTCCAGGCACTTACA 935
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 CCCATGCGAGTGCCAACTTTGAACATGGACGTGATGCCTGGCAGGACGTCCACTACCGCC 995
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 AAGAAGGCATTCCCTTTGAACCTGTTGCAGAGTCGGGAGCCTCTACGTCCTCTGTAGCTT 1055
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 CTCTGCCTGGGAAGGTTCCTGTGGTTTATACTGGACACTGAGCTGCTGCTTGACTCTGCT 1115
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 ------------------------------------------------------------
consensus_2796#4 ------------------------------------------------------------
consensus_2796#0 TCATTCTGACCTGATGGTGGCATCAATCTTCACAGGGGTTCAATGTATGAAATAACATTT 1175
consensus_2796#1 ------------------------------------------------------------
consensus_2796#2 ------------------------------------------------------------
consensus_2796#3 -----------------------------------------------
consensus_2796#4 -----------------------------------------------
consensus_2796#0 GCTTGTCTGAATTCTGCTGAACTCAATAAAAGCTGACTATTTTGGCT 1222
consensus_2796#1 -----------------------------------------------
consensus_2796#2 -----------------------------------------------
|
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |