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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2797#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 479 fasta sequence
[GCATCATGGTGCGCATGAACGTTCTCGCAGATGCTCTCAAAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACCCTGGGAAAAAAAAAAAAAAAACCCCGAGGGGGGGCCCGGACCCAAGTTTTGGT]
[-] EMBL CA588830 [GCATCATGGTGCGCATGAACGTTCTCGCAGATGCTCTCAAAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGA ]
[-] EMBL CA588732 [GCATCATGGTGCGCATGAACGTTCTCGCAGATGCTCTCAAAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCAT ]
[+] EMBL CA844880 [ TGGTGCGCATGAACGTTCTCGCAGATGCTCTCAAAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACCC ]
[+] EMBL CA330446 [ TGGTGCGCATGAACGTTCTCGCAGATGCTCTCAAAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACC ]
[+] EMBL CA846833 [ TGGTGCGCATGAACGTTCTCGCAGATGCTCTCAAAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACC ]
[+] EMBL CA330480 [ TGGTGCGCATGAACGTTCTCGCAGATGCTCTCAAAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACCCTGGAAAAA ]
[+] EMBL FR0055525 [ GCATGAACGTTCTCGCAGATGCTCTCATTAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGGATTATGGATCACGAAGAGGCCAGACGGGAACACACAGGAGGCACAATCCTTGGGTTCTTTTTCTAAAAT ]
[+] EMBL CA844654 [ GAACGTTCTCGCAGATGCTCTCAAAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACCC ]
[+] EMBL FR0055579 [ CTCGCATTTGCTCTCAGAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAATCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGGCTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGTCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGCTATATTGTGCTGAGAGCCTCAGCTGGGATTATGGATCACGAAGAGGCCAGTCGGGAACACACAGGATGCAATATCCTTGGGT ]
[+] EMBL FR0055952 [ CTCTCAAAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGTCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGCGAAGTGGCAGAACAACCTGTTGCCCTCAAGGGAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGCTCACGAAGAGGCCAGACGGAAACACACAGGAGGCACAATCCTTGGCTTCGTTTTCTAAAATGCAAAGAACTGg ]
[+] EMBL FR0058015 [ AAAGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACG ]
[+] EMBL FR0057706 [ AGCATCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGGAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACCCTGGGAAANACAAAAAAAAA ]
[+] EMBL FR0056392 [ tttGCATCACCATTGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGTATTATGGGTCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGGTTCTTTTTCTAAAATGCATAGAACTGCACAATAAAAAACCC ]
[+] EMBL CA844600 [ TCAACAATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACCC ]
[+] EMBL FR0056918 [ AATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGGAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGGAGCACACAGGAGGCAAAATCCTTGGAT ]
[+] EMBL FR0055753 [ AATGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGGAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGGCAGACGGGAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACCCTGGGAAAGAATTTGTAAAAACCCTCAGGGGGG ]
[+] EMBL FR0055181 [ TGCTGAGAAGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACCCTGGTAAAAAAAAAAAAAAAACCTCGAGGGGGGGCCCGGACCCAAGTTTTGGT]
[+] EMBL FR0056519 [ CTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAGGTAAA ]
[+] EMBL CA330591 [ TGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCTACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACC ]
consensusID : consensus_2797#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 407 fasta sequence
[TTGGGAAACGCAAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCANAATAAAAAACCCTGGAAAAAAAAATTTTAAAAAAACAAAAAAACTCCCGGGGGGG]
[+] EMBL FR0055776 [TTGGGAAACGCAAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCANAATAAAAAACCCTGGAAAAAAAAATTTTAAAAAAACAAAAAAACTCCCGGGGGGG]
[+] EMBL CA330520 [ TGCTCCAAGGTTATTGTGCGCTTCCTCACTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCGGAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTTTTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGTTTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAAAAAACCCTGGAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2797#0 GCATCATGGTGCGCATGAACGTTCTCGCAGATGCTCTCAAAAGCATCAACAATGCTGAGA 60
consensus_2797#1 ------------------------------------------------------------
consensus_2797#0 AGCGTGGGAAACGCCAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCA 120
consensus_2797#1 ---TTGGGAAACGCAAGGTCCTGATCAGGCCCTGCTCCAAGGTTATTGTGCGCTTCCTCA 57
********** *********************************************
consensus_2797#0 CTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCG 180
consensus_2797#1 CTGTCATGATGAAGCACGGTTACATTGGTGAGTTTGAGATCATTGATGATCACAGAGCCG 117
************************************************************
consensus_2797#0 GAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTT 240
consensus_2797#1 GAAAAATCGTCGTCAATCTCACAGGCAGACTGAACAAGTGTGGTGTGATCAGCCCACGTT 177
************************************************************
consensus_2797#0 TTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGT 300
consensus_2797#1 TTGACCTCCAGCTCAAGGACCTGGAGAAGTGGCAGAACAACCTGTTGCCCTCAAGGCAGT 237
************************************************************
consensus_2797#0 TTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGA 360
consensus_2797#1 TTGGATATATTGTGCTGACAACCTCAGCTGGCATTATGGATCACGAAGAGGCCAGACGGA 297
************************************************************
consensus_2797#0 AACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCAAAATAA 420
consensus_2797#1 AACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAAATGCAAAGAACTGCANAATAA 357
****************************************************** *****
consensus_2797#0 AAAACCCTGGGAAAAAAAAAAAAAAAACCCCGAGGGGGGGCCCGGACCCAAGTTTTGGT 479
consensus_2797#1 AAAACCCTGGAAAAAAAAATTTTAAAAAAACAAAAAAACTCCCGGGGGGG--------- 407
********** ******** **** * * *****
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |