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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2831#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 903 fasta sequence
[TTACGTTCGGGTGCGGACCAGCAGCTCAACTTAAATTTAAATATGACGATTCAAACAGAAACAGAAAAATCAGCGCTGACTTATTCCA-AGTCTAAAGGGCTTGGGACATTAGTCT-CTGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAA-GGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAG-AAGAAGGCCATCC-TGAAGAAGAA-GGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCCACTCCCTCAACATTGTCTACAGGGACCTGAAGCCTGAGAACATCCTTCTGGACTCTCAGGGTCACATTATCCTCACAGACTTCGGCCTGTGCAAGGAGAACATTGAACCCAATGGCACCACATCAACTTTCTGTGGCACGGCAGAGTATTTAGCTCCCGAGGTTCTGCACAAGCAGCCGTATGACAGGACAGTAGACTGGTGGTGTTTGGGAGCAGGTCTC]
[+] EMBL CA589740 [TTACGTTCGGGTGCGGACCAGCAGCTCAACTTAAATTTAAATATGACGATTCAAACAGAAACAGAAAAATCAGCGCTGACTTATTCCA AGTCTAAAGGGCTTGGGACATTAGTCT CTGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAA GGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAG AAGAAGGCCATCC TGAAGAAGAA GGAGGA ]
[+] EMBL CA589197 [ TACGTTCGGGTGCGGACCAGCAGCTCAACTTAAATTTAAATATGACGATTCAAACAGAAACAGAAAAATCAGCGCTGACTTATTCCA AGTCTAAAGGGCTTGGGACATTAGTCT CTGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAA GGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAG AAGAAGGCCATCC TGAAGAAGAA GGAGGAGAGACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCCATCCCCTTCAGAGAGAGCGCTGCTTC ]
[+] EMBL CA588168 [ GTCCTGAAGCGGACCAGCAGCTCAACTTAAATTTAAATATGACGCATCAAACAGAAACAGAAAAATCAGCGCTGACTTATTCCA AGTCTAAAGGGCTTGGGACATTAGTCT CTGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACCTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAA GGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAG AAGAAGGCCATCC TGAAGAAGAA GGAGGAGAAACACATC ]
[+] EMBL CA588969 [ CGGACCAGCAGCTCAACTTAAATTTAAATATGACCATTCAAACAGAAACAGAAAAATCAGCGCTGACTTATTCCA AGTCTAAAGGGCTTGGGACATTAGTCT CTGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGATCGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAA GGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAG AAGAAGGCCATCC TGAAGAAGAA GGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTATAGAACGTCAAGCACCCGTTCTTGGTGGGCCCGCACTAC ]
[+] EMBL FR0058712 [ TCAAACAGAAACAGAAAAATCAGCGCTGACTTATTCCA GGTCTAAAGGGCTTGGGACATTAGTCT CTGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAGCTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGGCCTTCCTCCAACCCCTCAGGCAAACCCAACGACTTCCACTTCCTTAAGG ]
[+] EMBL FR0058390 [ ATCAGCGCGGACTTATTCCG GGGCTAAAGGGCTTGGGACATTAGTCT CTGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGGAAGGGGGCTGCTTGCGCGGCACCGCACAGACGACCAGTTTTACGCCCGCAAAGCCTTGCAGAAAGAAGGCCATCCTTGAAGAAGAAGGGAGGAGAAAC ]
[+] EMBL FR0058960 [ GCTGACTTATTCCAGAGGGTAATGTGCTTGGGACATTAGTCT CTGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCAC ]
[+] EMBL CA591262 [ ACAGGAGTGCACACATCCGAGTGCAGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAA GGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAG AAGAAGGCCATCC TGAAGAAGAA GGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAA ]
[+] EMBL CA589045 [ ACAGGAGTGCACACATCCGAGTGCAGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAA GGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAG AAGAAGGCCATCC TGAAGAAGAA GGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCTATCACCTTCAGAGAAAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCCACTCCCTCAACATTGTCTACAGGGACCTGAAGCCT ]
[+] EMBL CA846042 [ atcgttaaGGAACATCCGAGTGCAGCTTTTATG AACAGAGG ACCTTTGAATGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTCAACATGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAA GGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAG AAGAAGGTTTTCC TGAAGAAGAA GGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCCACTCCCTCAACATTGTCTACAGGGACCTGAAGCCTGAGAACATCCTTCTGGACTCTCAGGGTCACATTATCCTCACAGACTTCGGCCTGTGCAAGGAGAACATTGAACCCAATGGCACCACATCAACTTTCTGTGGCACGGCAGAGTATTTAGCTCCCGAGGTTCTGCACAAGCAGCCGTATGACAGGACAGTAGACTGGTGGTGTTTGGGAGCAGGTCTC]
[+] EMBL CA589228 [ tccgagtg CAGCTTTTATGAAACAGAGGACCATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCTTTTTCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAA GGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAG AAGAAGGCCATCC TGAAGAAGAA GGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGGGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCCACTCCCTCAACATTGTCTACAGG ]
[+] EMBL CA330278 [ ACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAA GGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAG AAGAAGGCCATCC TGAAGAAGAA GGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCCACTCCCTCAACATTGTCTACAGGGACCTGAAGCCTGAGAACATCCTTCTGGACTCTCAGGGTCACATTATCCTCACAGACTTCGGCCTGTGCAAGGAGAACATTGAACCCAATGGCACCACATCAACTTTCTGTGGCACG ]
consensusID : consensus_2831#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 686 fasta sequence
[GGAGCCTGTAGAAGTTCTCTGGGCGATTCGGAAACTCTACGCATCCCAATGAAAGACAAAACCGCCGCGTTGACTTCTTTTATGAAACAGAGGAAGATGGGG--CTGAAC-GACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCAC-CGCAC-TGACGACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCCACTCCCTCAACATTGTCTACAGGGACCTGAAGCCTGAGAACATCCT]
[+] EMBL CA591367 [GGAGCCTGTAGAAGTTCTCTGGGCGATTCGGAAACTCTACGCATCCCAATGAAAGACAAAACCGCCGCGTTGACTTCTTTTATGAAACAGAGGAAGATGGGG CTGAAC GACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCAC CGCAC TGACGACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTCTACTCGGCA ]
[+] EMBL FR0059972 [ CGGAAACTTTACGCATCCCAATGAAAGACAAAACCGCCGCGTTGACTTCTTTGAGGAAACAGAGGAAGAGTGGG CTGAAC GACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCC ]
[+] EMBL FR0059623 [ AGATAAAACCGCCGCGTTGACTTCTTTTATGAAACAGAGGAAGATGGGG CTGAAC GACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGAGCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTTCTCAAGGNGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCTCTTGCACTTGACGACCAGTTTT ]
[+] EMBL BU808119 [ GACAAAACCGCCGCGTTGACTTCTTTTATGAAACAGAGGAAGATGGGG CTGAAC GACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTAGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCTCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCAC CGCAC TGACGACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTC ]
[+] EMBL CA846033 [ acccgtAAAAAACATCCGAGT GCAGCTTTTATGAAACAGAGGAAGCCTGGGAAAAGAAC GACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTCCACATGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCAC CGCAC TGACGACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCCACTCCCTCAACATTGTCTACAGGGACCTGAAGCCTGAGAACATCCT]
[+] EMBL BU805992 [ TTTTATGAAACAGAGGAAGATGAGG CTGAAC GACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCTTTTTCTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCAC CGCAC TGACGACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCC ]
[+] EMBL FR0058281 [ TGAAACAGAGGAAGATGGGG CTGAACTGACTTCATTCAGAGGCTCGCCACAAGGTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGGCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGGGATCGTCAAAGGCAGCTTCGCCAAGGTGCTGCTTGCGCGGCAC CGCACTTGACGACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGATGAAGAAGGAGGAGAAACACATCATGTCTGAGAGGAACGAGGGGCTAAAGAACGT ]
[+] EMBL FR0058458 [ ACAGAGGAAGATGGGG CTGAAC GACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGGCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGAGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCAC CGCAC TGACGACCAGTTTTACGCCGTCAAAGTCTTGCTGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGGCAAGCACCTCGTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAG ]
[+] EMBL BU807240 [ GAGGAAGATGGGG CTGAAC GACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCAC CGCAC TGACGACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATGGAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGTTCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCCACTCCCTCAACATTGTCT ]
[+] EMBL FR0058125 [ AATATGTTG ATGAAC GACTACATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCAC CGCAC TGACGACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTG ]
[+] EMBL FR0058544 [ AGATGGGT TTGAAT GACTTCATTCAGAGGCTCGCCACAAGCTCCTACGCCTGCAAGCACCTTGAAGTACAGTCCATGCTGAACTTGA ]
[+] EMBL FR0059008 [ CATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCACCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGGGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCAC CGCAC TGACGACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGAAACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGGGGGCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACT ]
consensusID : consensus_2831#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 554 fasta sequence
[TTACGTTCGGGTGCGGACCAGCAGCTCAACTTAAATTTAAATATGACGATTCAAACAGAAACAGAAAAATCAGCGCTGACTTATTCCAAGTCTAAAGGGCTTGGGACATTAGTCTCTGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCAGTGAGTACACGCTGACTCATGCTGTTGTTTTGTGTTTTCTGGAACAATTTTCTCCCTTTGTGTCACAAACTGACTCACACTGTGTTGCACACACGTGATTGTTTCTGTAAAGACTAAATTGGATTTTCTATGTTCAGCCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCC]
[+] EMBL CA591047 [TTACGTTCGGGTGCGGACCAGCAGCTCAACTTAAATTTAAATATGACGATTCAAACAGAAACAGAAAAATCAGCGCTGACTTATTCCAAGTCTAAAGGGCTTGGGACATTAGTCTCTGCTTTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCCTACGCCTGCAAGCAGTGAGTACACGCTGACTCATGCTGTTGTTTTGTGTTTTCTGGAACAATTTTCTCCCTTTGTGTCACAAACTGACTCACACTGTGTTGCACACACGTGATTGTTTCTGTAAAGACTAAATTGGATTTTCTATGTTCAGCCCTGAAGTTCAGTCCATCCTGAACTTGAATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCCAGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCCTCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCACCGCACTGACGACCAGTTTTACGCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2831#0 TTACGTTCGGGTGCGGACCAGCAGCTCAACTTAAATTTAAATATGACGATTCAAACAGAA 60
consensus_2831#1 -------------------------------GGAGCCTGTA---GAAGTTCTCTGGGCGA 26
consensus_2831#2 TTACGTTCGGGTGCGGACCAGCAGCTCAACTTAAATTTAAATATGACGATTCAAACAGAA 60
* * * ** * * *
consensus_2831#0 ACAGAAAAATCAGCGCTGACTTATTCCAAGTCTAAAGGGCTTGGGACATTAGTCTCTGCT 120
consensus_2831#1 TTCGGAAACTCTACGC-ATCCCAATGAAAGACAAAACCGCC----GCGTTGACTTC---T 78
consensus_2831#2 ACAGAAAAATCAGCGCTGACTTATTCCAAGTCTAAAGGGCTTGGGACATTAGTCTCTGCT 120
* *** ** *** * * * *** * *** ** * ** ** *
consensus_2831#0 TTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCC 180
consensus_2831#1 TTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCC 138
consensus_2831#2 TTTATGAAACAGAGGAAGATGGGGCTGAACGACTTCATTCAGAGGCTCGCCACAAACTCC 180
************************************************************
consensus_2831#0 TACGCCTGCAAGCA---------------------------------------------- 194
consensus_2831#1 TACGCCTGCAAGCA---------------------------------------------- 152
consensus_2831#2 TACGCCTGCAAGCAGTGAGTACACGCTGACTCATGCTGTTGTTTTGTGTTTTCTGGAACA 240
**************
consensus_2831#0 ------------------------------------------------------------
consensus_2831#1 ------------------------------------------------------------
consensus_2831#2 ATTTTCTCCCTTTGTGTCACAAACTGACTCACACTGTGTTGCACACACGTGATTGTTTCT 300
consensus_2831#0 -------------------------------CCCTGAAGTTCAGTCCATCCTGAACTTGA 223
consensus_2831#1 -------------------------------CCCTGAAGTTCAGTCCATCCTGAACTTGA 181
consensus_2831#2 GTAAAGACTAAATTGGATTTTCTATGTTCAGCCCTGAAGTTCAGTCCATCCTGAACTTGA 360
*****************************
consensus_2831#0 ATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCC 283
consensus_2831#1 ATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCC 241
consensus_2831#2 ATCCTCCACAAGATGCGGAGCTCATGAACGCAAACCCATCTCCTCCTCCCAGTCCATCCC 420
************************************************************
consensus_2831#0 AGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCC 343
consensus_2831#1 AGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCC 301
consensus_2831#2 AGCAGATCAACCTCGGCCCTTCCTCCAACCCCTCAGCCAAACCCAACGACTTCCACTTCC 480
************************************************************
consensus_2831#0 TCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCACCGCACTGACG 403
consensus_2831#1 TCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCACCGCACTGACG 361
consensus_2831#2 TCAAGGTGATCGGCAAAGGCAGCTTCGGCAAGGTGCTGCTTGCGCGGCACCGCACTGACG 540
************************************************************
consensus_2831#0 ACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGA 463
consensus_2831#1 ACCAGTTTTACGCCGTCAAAGTCTTGCAGAAGAAGGCCATCCTGAAGAAGAAGGAGGAGA 421
consensus_2831#2 ACCAGTTTTACGCC---------------------------------------------- 554
**************
consensus_2831#0 AACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGG 523
consensus_2831#1 AACACATCATGTCTGAGAGGAACGTGTTGCTAAAGAACGTCAAGCACCCGTTCTTGGTGG 481
consensus_2831#2 ------------------------------------------------------------
consensus_2831#0 GCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATG 583
consensus_2831#1 GCCTGCACTACTCTTTCCAGACAGCAGACAAGCTCTACTTTGTCCTGGACTACATCAATG 541
consensus_2831#2 ------------------------------------------------------------
consensus_2831#0 GAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGT 643
consensus_2831#1 GAGGAGAGTTGTTCTATCACCTTCAGAGAGAGCGCTGCTTCCTGGAGCCCAGAGCCAGGT 601
consensus_2831#2 ------------------------------------------------------------
consensus_2831#0 TCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCCACTCCCTCAACATTGTCTACA 703
consensus_2831#1 TCTACTCGGCAGAGATTGCCAGCGCCTTGGGTTACCTCCACTCCCTCAACATTGTCTACA 661
consensus_2831#2 ------------------------------------------------------------
consensus_2831#0 GGGACCTGAAGCCTGAGAACATCCTTCTGGACTCTCAGGGTCACATTATCCTCACAGACT 763
consensus_2831#1 GGGACCTGAAGCCTGAGAACATCCT----------------------------------- 686
consensus_2831#2 ------------------------------------------------------------
consensus_2831#0 TCGGCCTGTGCAAGGAGAACATTGAACCCAATGGCACCACATCAACTTTCTGTGGCACGG 823
consensus_2831#1 ------------------------------------------------------------
consensus_2831#2 ------------------------------------------------------------
consensus_2831#0 CAGAGTATTTAGCTCCCGAGGTTCTGCACAAGCAGCCGTATGACAGGACAGTAGACTGGT 883
consensus_2831#1 ------------------------------------------------------------
consensus_2831#2 ------------------------------------------------------------
consensus_2831#0 GGTGTTTGGGAGCAGGTCTC 903
consensus_2831#1 --------------------
consensus_2831#2 --------------------
|
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |