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Takifugu rubripes
cluster # 2832 cluster # 2832       Sequences # 25       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2832#0 length = 562 sequences # 18  
consensus_2832#1 length = 437 sequences # 6  
consensus_2832#2 length = 122 sequences # 1  

consensusID : consensus_2832#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 562
fasta sequence
                              [TTAATTAAAAGTGTTTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGAGCGAGGCCGGCGTCAAGATGAATGACACAGTGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA-AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGAAAAAAAACCGGGACA----GAAAAGGAAAAAA]

[-] EMBL CA329612             [TTAATTAAAAGTGTTTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGAGCGAGGCCGGCGTCAAGATGAATGACACAGTGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGAAAAAAAACCG                      ]
[+] EMBL BU807494             [                                                  GAGCGAGGCCGGCGTCAAGATGAATGACACAGTGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTT                                                          ]
[+] EMBL CA845598             [                                                              CGTCAAGATGAATGACACAGTGACAGTCAGGACCCTCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAA                                           ]
[+] EMBL CA330518             [                                                              CGTCAAGATGAATGACACAGTGACAGTCATTTCCCCCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACTTTTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGT                                                     ]
[+] EMBL CA845179             [                                                                              ACAGTGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATA                                         ]
[+] EMBL FR0055740            [                                                                                  TGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAGAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCATAAAGTGAGCCAGAGCTGCCAGGGAAGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACC                                              ]
[+] EMBL CA845125             [                                                                                  TGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGA                                ]
[+] EMBL CA845076             [                                                                                                CGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCA                                                ]
[+] EMBL CA845646             [                                                                                                 GCACCTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGAAAAAAAATCGGGACATTCTGTCAAGGAAAAAA]
[+] EMBL FR0056359            [                                                                                                                                  AGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGAAAAAAAATCGGGAAA    AAAAAATAAAA  ]
[+] EMBL FR0056140            [                                                                                                                                                                          AGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGAAAAAAAAC                        ]
[+] EMBL FR0056079            [                                                                                                                                                                           GTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGAAAAAAAATCGGAA                   ]
[+] EMBL FR0055895            [                                                                                                                                                                                                       TTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAGAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCG                                 ]
[+] EMBL FR0057661            [                                                                                                                                                                                                                                                                  TTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGAAAAAAAACCGGGACA                 ]
[+] EMBL CA845218             [                                                                                                                                                                                                                                                                                                       ACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAA AAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGT                                     ]
[+] EMBL CA330873             [                                                                                                                                                                                                                                                                                                                                       CCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAACAAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTC                                  ]
[+] EMBL CA847044             [                                                                                                                                                                                                                                                                                                                                                         AGAGATGGTCTCTTTGAGAA AAAGAAGACTTCTACCTTACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTT                                   ]
[+] EMBL CA330144             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGAAAAAAAACC                       ]


>consensus_2832#0 TTAATTAAAAGTGTTTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGAGCGAGGCC GGCGTCAAGATGAATGACACAGTGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTG CTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAG ACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTT TTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGAC TCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTT GAGAAAAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTA CGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGG GAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGAAAAAAA ACCGGGACAGAAAAGGAAAAAA



consensusID : consensus_2832#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 437
fasta sequence
                              [CTTCCTCCTTCTCTACGTCCCTGAGCGAGGCCGGCGTCAAGATGAATGACACAGTGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCC-TGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAG-TTTGGCGGTGGCAAAACAACAGGCTTT--GCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAAAAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAA-GGCCAGTGTGGGCGCTGCTAGCAAAAAGTGA]

[+] EMBL CA847220             [CTTCCTCCTTCTCTACGTCCCTGAGCGAGGCCGGCGTCAAGATGAATGACACAGTGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCC TGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAG TTTGGCGGTGGCAAAACAACAGGCTTT  GCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAAAAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAA GGCCAGTGTGGGCGCTGCTAGCAAAAAGTGA]
[+] EMBL FR0061385            [                                                       GACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAGATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCC TGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAG TTTGGCGGTGGCAAAACAACAGGCTTT  GCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAAAAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGA                                                      ]
[+] EMBL FR0058097            [                                                                 ACCCGCAAGTTCATGACGAATTGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTTAACGTGGCTTTCGTTTTTGGCTTCAGGACTCAGTTTTGGCGGTGGCAAAACAACAGGCTTTTGCAAATGGTGTACcgaa                                                                                                                                                                     ]
[+] EMBL FR0056205            [                                                                     GCATGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAGATCATGGAGAAACTTGCCATAATGTACAAGACCACCCC TGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAG TTTGGCGGTGGCAAAACAACAGGCTTT  GCAATGGTGTACGACTCCTTACACTATGCCAGCAAAAGTGATCCCAACCACAGACTGGACAGACATGGTCTCTTTGAGAAAAAGAAG                                                                                              ]
[+] EMBL FR0056731            [                                                                             ATCTCTATCCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGACATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCC TGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAG TTTGGCGGTGGCAAAGCAACAGGCTTT  GCAATGGTGTACGACTCCTTAGACTATGCCAAGATAAGTGGGCCCAAGCACAGACTGGCCACACATGGTCTCTTTGAGAAAAAGAACACTTCTAGGAACCAACGCATGGAACGCATGAACAGGATGAAGAAAGTACGAGGCACCAGGAATGGCCAG                         ]
[+] EMBL CA845017             [                                                                                 CAAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCC TGACGTTGTCTTCGTTTTTGGCTTCACGACTCAG TTTGGCGGTGGCAAAACAACACGCTTT  GCAATGGTGAACGACTCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGACAGACATGGTCTCTTTGAGAAAAAGAAGACTTCTAGGAAACAACGCAAATAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAATAA CGCCAGTGTGGGC                  ]


>consensus_2832#1 CTTCCTCCTTCTCTACGTCCCTGAGCGAGGCCGGCGTCAAGATGAATGACACAGTGACAG TCAGGACCCGCAAGTTCATGACGAACCGCTTGCTTCAGAGGAAGCAAATGGTTGTCGATG TTCTGCATCCCGGCAAGGCCACAGTCCCCAAGACTGAAATCAGGGAGAAACTTGCCAAAA TGTACAAGACCACCCCTGACGTTGTCTTCGTTTTTGGCTTCAGGACTCAGTTTGGCGGTG GCAAAACAACAGGCTTTGCAATGGTGTACGACTCCTTAGACTATGCCAAGAAAAATGAGC CCAAACACAGACTGGCCAGACATGGTCTCTTTGAGAAAAAGAAGACTTCTAGGAAACAAC GCAAAGAACGCAAGAACAGAATGAAGAAAGTACGAGGCACCAAGAAGGCCAGTGTGGGCG CTGCTAGCAAAAAGTGA



consensusID : consensus_2832#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 122
fasta sequence
                              [AAAGTACGAGGAACCAAGAAGGCCAGTGTGGGCGTCGTCTAAAAAAACTGATACAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATTTTGTTAGGAAA]

[+] EMBL CA846380             [AAAGTACGAGGAACCAAGAAGGCCAGTGTGGGCGTCGTCTAAAAAAACTGATACAGAGCTGCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATTTTGTTAGGAAA]


>consensus_2832#2 AAAGTACGAGGAACCAAGAAGGCCAGTGTGGGCGTCGTCTAAAAAAACTGATACAGAGCT GCCAGGGAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATTTTGTTAGGA AA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2832#0      TTAATTAAAAGTGTTTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGAGCGAGGCC 60
consensus_2832#1      ----------------------------CTTCCTCCTTCTCTACGTCCCTGAGCGAGGCC 32
consensus_2832#2      ------------------------------------------------------------
                                                                                  

consensus_2832#0      GGCGTCAAGATGAATGACACAGTGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTG 120
consensus_2832#1      GGCGTCAAGATGAATGACACAGTGACAGTCAGGACCCGCAAGTTCATGACGAACCGCTTG 92
consensus_2832#2      ------------------------------------------------------------
                                                                                  

consensus_2832#0      CTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAG 180
consensus_2832#1      CTTCAGAGGAAGCAAATGGTTGTCGATGTTCTGCATCCCGGCAAGGCCACAGTCCCCAAG 152
consensus_2832#2      ------------------------------------------------------------
                                                                                  

consensus_2832#0      ACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTT 240
consensus_2832#1      ACTGAAATCAGGGAGAAACTTGCCAAAATGTACAAGACCACCCCTGACGTTGTCTTCGTT 212
consensus_2832#2      ------------------------------------------------------------
                                                                                  

consensus_2832#0      TTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGAC 300
consensus_2832#1      TTTGGCTTCAGGACTCAGTTTGGCGGTGGCAAAACAACAGGCTTTGCAATGGTGTACGAC 272
consensus_2832#2      ------------------------------------AAAGTACGAGGAACCAAGAAGGCC 24
                                                          * **     * **    * * * *

consensus_2832#0      TCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTT 360
consensus_2832#1      TCCTTAGACTATGCCAAGAAAAATGAGCCCAAACACAGACTGGCCAGACATGGTCTCTTT 332
consensus_2832#2      AGTGTGGGCGTCGTCTAAAAAAA------CTGATACAGAGCTGCCAGGGAGGGTCTCCGT 78
                          * * *   * * * *****      *  * *****   *****  * ******  *

consensus_2832#0      GAGAAAAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTA 420
consensus_2832#1      GAGAAAAAGAAGACTTCTAGGAAACAACGCAAAGAACGCAAGAACAGAATGAAGAAAGTA 392
consensus_2832#2      GCTCAAGATGTTCTTTTCTGTTGTCACC--AAATTTTGTTAGGAAA-------------- 122
                      *   ** *      **   *    ** *  ***    *  ** * *              

consensus_2832#0      CGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGAGCCAGAGCTGCCAGG 480
consensus_2832#1      CGAGGCACCAAGAAGGCCAGTGTGGGCGCTGCTAGCAAAAAGTGA--------------- 437
consensus_2832#2      ------------------------------------------------------------
                                                                                  

consensus_2832#0      GAGGGTCTCCGTGCTCAAGATGTTCTTTTCTGTTGTCACCAAATAAAGTTTCGAAAAAAA 540
consensus_2832#1      ------------------------------------------------------------
consensus_2832#2      ------------------------------------------------------------
                                                                                  

consensus_2832#0      ACCGGGACAGAAAAGGAAAAAA 562
consensus_2832#1      ----------------------
consensus_2832#2      ----------------------
                                            




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)