These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2833#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 741 fasta sequence [TGTTGCATTACAGAAGCGAGCTACACTCACTGAACGCTCTGTCAAGGTTTATTAAACACAGATACTAATTGTATATAGTAGAATAATGTTACAAAGGTGATGATTAGTATTGCTTTCTGTTTTTGGAGAGGGGTATTCTTTCATTCACACCGATTGTTCTGACAGGGCAACACTCAGACCAAAGAACGCACGTGAATTCAGACGAGAAATTGTTCAATTGTTTTATTTTTTTGTTTTTGTTGTTTCATCTCATGACAGGACCAAGAAAAGTGACCAAGATTATTTTGAAACATCTCGTGCTGAATTCGGCACGAGGCCATATCAGGTTGAAGATGGTCC-AGCG-CCTGACTTACCGCCG--TAGGTTGTC-CT-ACAACACCGC-CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG-GTCCTCA-TGA-GGCTCTCCA--AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAATCCAAAGGGGGGAGAAAAAAAC] [+] EMBL CA330704 [TGTTGCATTACAGAAGCGAGCTACACTCACTGAACGCTCTGTCAAGGTTTATTAAACACAGATACTAATTGTATATAGTAGAATAATGTTACAAAGGTGATGATTAGTATTGCTTTCTGTTTTTGGAGAGGGGTATTCTTTCATTCACACCGATTGTTCTGACAGGGCAACACTCAGACCAAAGAACGCACGTGAATTCAGACGAGAAATTGTTCAATTGTTTTATTTTTTTGTTTTTGTTGTTTCATCTCATGACAGGACCAAGAAAAGTGACCAAGATTATTTTGAAACATCTCGTGCTGAATTCGGCACGAGGCCATATCAGGTTGAAGATGGTCC AGCG CCTGACTTACCGCCG TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTG ] [+] EMBL FR0055543 [ CGAGGCCATATCAGGTTGAATCTGGACC AGCG CCTGACTTACCGCCG TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAGAGCCCCCAAGTCGGGATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCATCA TGA GGCTCTCCA TCACCAAGAAGCACGTCAGCAGAGCTTACGGCGGCTCCATGTGCGCCAAGTGTGTGCGTGACATGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGGAATCGAAGTGTGACGTGTGTTTGT ] [+] EMBL FR0055821 [ ATATCAGGTTGAAGATGGCCA AGCG CCTGACTTACCGCCG TATGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAGGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGGATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGTGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAGGCACAGAGCCAGAAATCGAAGTGAGAC GTTTGTGATGACA ] [-] EMBL CA588805 [ GGTTGAAGATGGTCCAAAAA AAAGACTTACCGCCG TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTG ] [-] EMBL CA588716 [ GGTTGAAGATGGTCC AGCGACAAGACTTACCGCCG TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGG ] [+] EMBL CA845088 [ AGATGGTCC AGCG CCTGACTTACCGCCG TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAA ] [+] EMBL CA845664 [ AGATGGTCC AGCG CCTGACTTACCGCCG TAGGTCCTT CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCATAGAGCCAGAAATCGAAGTGAAAC GTTTGTAATGACAATAAAAAGACAAAT ] [+] EMBL CA330569 [ GTCC ATCG CCTGACTTACCGCCG TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCC AAACCATGAATCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAATCC ] [-] EMBL CA588863 [ aaC AGCG CCTGACTTACCGCCG TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGATAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG G ] [+] EMBL FR0056743 [ agGACTTACCGCCG TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCACGAAGGTCGGGAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAGGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAGGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAGATCGAAGTGAAACGTGTGTTTGTAATGACAATAAGGAGACACATCCAGGGGGGGGAGAAAATTA ] [+] EMBL CA847121 [ ACCGCCGNTAGGGTTGTCTCC ACAACACCGCGCTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACATAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAA ] [+] EMBL CA844609 [ ACCGCCG NAGGGTGTC CC TCAACAGCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCTAGAAATCGAAGTGAAAC GTTTGTAATGACAATAAAAAGACAA ] [+] EMBL FR0056023 [ G TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAAGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAAC CTTTGTAATGACAATAAAAAGACAAATCCAAAACGAAAAAAAAAAACC] [+] EMBL FR0055291 [ GTTGTC CT ACAACACCGC CTCCAACAAGACCATACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGGATCCGAGCTGTCCGACCTCAGTGTCCTCACTGAGGGCTCTCCAAGAACCTAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAACGTGCTGAAGGCACAGGCACAGAGCCAGAAATCGAACTGAGACGTGT ] [+] EMBL CA847288 [ GTC CTNACCCTCCAGA CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAAC GTTTGTAATGACAATAAAAAGACAA ] [+] EMBL FR0056557 [ GTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCGGTGGAATCCGAGTTGTCCGACCTCAG GTCTCCA TGA GGCTCTCCA AACC ] [+] EMBL FR0056532 [ T ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGGATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAA GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGGGGC ] [+] EMBL FR0055883 [ CAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATG ] [+] EMBL CA330555 [ AAAGTTCCCCCCTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTTAATG ACTAGCACAGAGCCAGAAATCGAAGTGAAAC GTTTGTAATGACAATAAAAAGACAAA ] [+] EMBL CA845747 [ CATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCATTTTTTTAGAAATCGAAGTGAAAC GTTTGTAATGACAATAAAAAGACAA ] [+] EMBL CA330961 [ CTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAATCCAAA ] [+] EMBL CA340978 [ TCGAGGAGCAGAAGATTGTCGTCAAGGTTCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATG ] [+] EMBL CA340934 [ TCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATG ] [+] EMBL CA333653 [ AGAAGATTGTCGTCAAGGTGCTGAAGGTACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAATCCA ] [+] EMBL CA341025 [ CAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAA ] clustalw multiple alignements is not computed in this case |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |