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Takifugu rubripes
cluster # 2833 cluster # 2833       Sequences # 25       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2833#0 length = 741 sequences # 25  

consensusID : consensus_2833#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 25
consensus length = 741
fasta sequence
                              [TGTTGCATTACAGAAGCGAGCTACACTCACTGAACGCTCTGTCAAGGTTTATTAAACACAGATACTAATTGTATATAGTAGAATAATGTTACAAAGGTGATGATTAGTATTGCTTTCTGTTTTTGGAGAGGGGTATTCTTTCATTCACACCGATTGTTCTGACAGGGCAACACTCAGACCAAAGAACGCACGTGAATTCAGACGAGAAATTGTTCAATTGTTTTATTTTTTTGTTTTTGTTGTTTCATCTCATGACAGGACCAAGAAAAGTGACCAAGATTATTTTGAAACATCTCGTGCTGAATTCGGCACGAGGCCATATCAGGTTGAAGATGGTCC-AGCG-CCTGACTTACCGCCG--TAGGTTGTC-CT-ACAACACCGC-CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG-GTCCTCA-TGA-GGCTCTCCA--AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAATCCAAAGGGGGGAGAAAAAAAC]

[+] EMBL CA330704             [TGTTGCATTACAGAAGCGAGCTACACTCACTGAACGCTCTGTCAAGGTTTATTAAACACAGATACTAATTGTATATAGTAGAATAATGTTACAAAGGTGATGATTAGTATTGCTTTCTGTTTTTGGAGAGGGGTATTCTTTCATTCACACCGATTGTTCTGACAGGGCAACACTCAGACCAAAGAACGCACGTGAATTCAGACGAGAAATTGTTCAATTGTTTTATTTTTTTGTTTTTGTTGTTTCATCTCATGACAGGACCAAGAAAAGTGACCAAGATTATTTTGAAACATCTCGTGCTGAATTCGGCACGAGGCCATATCAGGTTGAAGATGGTCC AGCG CCTGACTTACCGCCG  TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTG                                                                                                                                                ]
[+] EMBL FR0055543            [                                                                                                                                                                                                                                                                                                                       CGAGGCCATATCAGGTTGAATCTGGACC AGCG CCTGACTTACCGCCG  TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAGAGCCCCCAAGTCGGGATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCATCA TGA GGCTCTCCA  TCACCAAGAAGCACGTCAGCAGAGCTTACGGCGGCTCCATGTGCGCCAAGTGTGTGCGTGACATGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGGAATCGAAGTGTGACGTGTGTTTGT                                          ]
[+] EMBL FR0055821            [                                                                                                                                                                                                                                                                                                                              ATATCAGGTTGAAGATGGCCA AGCG CCTGACTTACCGCCG  TATGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAGGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGGATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGTGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAGGCACAGAGCCAGAAATCGAAGTGAGAC    GTTTGTGATGACA                                   ]
[-] EMBL CA588805             [                                                                                                                                                                                                                                                                                                                                    GGTTGAAGATGGTCCAAAAA AAAGACTTACCGCCG  TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTG                                                                                                                         ]
[-] EMBL CA588716             [                                                                                                                                                                                                                                                                                                                                    GGTTGAAGATGGTCC AGCGACAAGACTTACCGCCG  TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGG                                                                                                                  ]
[+] EMBL CA845088             [                                                                                                                                                                                                                                                                                                                                          AGATGGTCC AGCG CCTGACTTACCGCCG  TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAA                      ]
[+] EMBL CA845664             [                                                                                                                                                                                                                                                                                                                                          AGATGGTCC AGCG CCTGACTTACCGCCG  TAGGTCCTT CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCATAGAGCCAGAAATCGAAGTGAAAC    GTTTGTAATGACAATAAAAAGACAAAT                     ]
[+] EMBL CA330569             [                                                                                                                                                                                                                                                                                                                                               GTCC ATCG CCTGACTTACCGCCG  TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCC   AAACCATGAATCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAATCC                   ]
[-] EMBL CA588863             [                                                                                                                                                                                                                                                                                                                                                aaC AGCG CCTGACTTACCGCCG  TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGATAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG G                                                                                                                                                                                                                                  ]
[+] EMBL FR0056743            [                                                                                                                                                                                                                                                                                                                                                          agGACTTACCGCCG  TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCACGAAGGTCGGGAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAGGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAGGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAGATCGAAGTGAAACGTGTGTTTGTAATGACAATAAGGAGACACATCCAGGGGGGGGAGAAAATTA ]
[+] EMBL CA847121             [                                                                                                                                                                                                                                                                                                                                                                 ACCGCCGNTAGGGTTGTCTCC ACAACACCGCGCTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACATAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAA                       ]
[+] EMBL CA844609             [                                                                                                                                                                                                                                                                                                                                                                 ACCGCCG  NAGGGTGTC CC TCAACAGCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCTAGAAATCGAAGTGAAAC    GTTTGTAATGACAATAAAAAGACAA                       ]
[+] EMBL FR0056023            [                                                                                                                                                                                                                                                                                                                                                                       G  TAGGTTGTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAAGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAAC    CTTTGTAATGACAATAAAAAGACAAATCCAAAACGAAAAAAAAAAACC]
[+] EMBL FR0055291            [                                                                                                                                                                                                                                                                                                                                                                             GTTGTC CT ACAACACCGC CTCCAACAAGACCATACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGGATCCGAGCTGTCCGACCTCAGTGTCCTCACTGAGGGCTCTCCAAGAACCTAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAACGTGCTGAAGGCACAGGCACAGAGCCAGAAATCGAACTGAGACGTGT                                                ]
[+] EMBL CA847288             [                                                                                                                                                                                                                                                                                                                                                                                GTC CTNACCCTCCAGA CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAAC    GTTTGTAATGACAATAAAAAGACAA                       ]
[+] EMBL FR0056557            [                                                                                                                                                                                                                                                                                                                                                                                GTC CT ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCGGTGGAATCCGAGTTGTCCGACCTCAG GTCTCCA TGA GGCTCTCCA  AACC                                                                                                                                                                                                        ]
[+] EMBL FR0056532            [                                                                                                                                                                                                                                                                                                                                                                                     T ACAACACCGC CTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCATCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGGATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAA GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGGGGC                                                                                                                                                                         ]
[+] EMBL FR0055883            [                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATG                                      ]
[+] EMBL CA330555             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAAGTTCCCCCCTCGGCATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTTAATG ACTAGCACAGAGCCAGAAATCGAAGTGAAAC    GTTTGTAATGACAATAAAAAGACAAA                      ]
[+] EMBL CA845747             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATGTGGCATCTGCCCAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAG GTCCTCA TGA GGCTCTCCA  AAACCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCATTTTTTTAGAAATCGAAGTGAAAC    GTTTGTAATGACAATAAAAAGACAA                       ]
[+] EMBL CA330961             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTCCATGTGCGCCAAGTGTGTGCGTGACAGGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAATCCAAA                ]
[+] EMBL CA340978             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCGAGGAGCAGAAGATTGTCGTCAAGGTTCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATG                                      ]
[+] EMBL CA340934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATG                                      ]
[+] EMBL CA333653             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGAAGATTGTCGTCAAGGTGCTGAAGGTACAAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAATCCA                  ]
[+] EMBL CA341025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAA                      ]


>consensus_2833#0 TGTTGCATTACAGAAGCGAGCTACACTCACTGAACGCTCTGTCAAGGTTTATTAAACACA GATACTAATTGTATATAGTAGAATAATGTTACAAAGGTGATGATTAGTATTGCTTTCTGT TTTTGGAGAGGGGTATTCTTTCATTCACACCGATTGTTCTGACAGGGCAACACTCAGACC AAAGAACGCACGTGAATTCAGACGAGAAATTGTTCAATTGTTTTATTTTTTTGTTTTTGT TGTTTCATCTCATGACAGGACCAAGAAAAGTGACCAAGATTATTTTGAAACATCTCGTGC TGAATTCGGCACGAGGCCATATCAGGTTGAAGATGGTCCAGCGCCTGACTTACCGCCGTA GGTTGTCCTACAACACCGCCTCCAACAAGACCAGACTGTCCCGGACGCCCGGTAACCGCA TCGTGTACCTGTACACCAAGAAGGTCGGCAAAGCCCCCAAGTCGGCATGTGGCATCTGCC CAGGACGACTCCGTGGAATCCGAGCTGTCCGACCTCAGGTCCTCATGAGGCTCTCCAAAA CCAAGAAGCACGTCAGCAGAGCTTACGGAGGCTCCATGTGCGCCAAGTGTGTGCGTGACA GGATCAAGCGTGCGTTCCTGATCGAGGAGCAGAAGATTGTCGTCAAGGTGCTGAAGGCAC AAGCACAGAGCCAGAAATCGAAGTGAAACGTGTGTTTGTAATGACAATAAAAAGACAAAT CCAAAGGGGGGAGAAAAAAAC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)