These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2836#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 852 fasta sequence [GAATGGGGCATTGTATTCCTGAAACTAAAGCCACGATCCGGTTCTTAGCCCCTTTCTTATATAGGGATCAAACATTGGCTCCTTGCGGCTTTTCAATCAAAGGGTAACAACAATTGAAGAACTTGCCAAGCAGGTTACATGTTTCTTGTTTTTGATCCCTTATTTCTTTTTTCTATGGGAAATATCAGATGGGGCTTTATTTTCCCAGTTGGGCTCTGACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTATATGTTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGAAAAAGAAAAAAAAAAAAAAAAAAAAAAAACGCCGACCATATTTCGAAAAAAAAAGTGGGAACCAAAAAAAAAAAAAATCCACAAGGGTTTTTGGAATTAACAAAGGGCCAACAAAAAAAAAAAAAATTTCCACAACCCGGACCAAGAAAAAGGTCCCCCAAAGTCCCCGAAAAAGGGTCCAGATCGTCAACCCCGGGCCCAAAGGGAATTTTGAAAGTTTTGAAAACCCCAAAAATCCACGGGGAACCATAAAAACC] [+] EMBL FR0060500 [GAATGGGGCATTGTATTCCTGAAACTAAAGCCACGATCCGGTTCTTAGCCCCTTTCTTATATAGGGATCAAACATTGGCTCCTTGCGGCTTTTCATTCAAAGGCTATC ACCATTGAAG ACTTGCCCAGCACGTTACATGTTTCTTGTTTTTGATCCCTTATTTCTTTTTTCTATGGGAAATATCAGATGGGGCTTTATTTTCCCAGTTGGTCTCTGACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTAT ] [+] EMBL FR0056765 [ CAATCAAAGGGTAACAACAATTGTAGAACTTGTCAAGCAGGTTACATGTTTCTTGTTTTTGATTCCTTATTTCTTTTTTCTATGTGAAATATCAGATGGGGCTTTATTTTCCCAGTTGGGCTCTGACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTATATGTTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGACGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGTAAATGTAACTTGGGTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAAT ] [+] EMBL CA846768 [ CTCTGACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTATATGTTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGAAAAAGA ] [+] EMBL CA846615 [ ACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTATATGTTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGAAAAAGA ] [+] EMBL CA846663 [ ACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTATATGTTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGAAAAAGA ] [+] EMBL CA846722 [ TCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTG ] [+] EMBL CA844949 [ GACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGA ] [+] EMBL FR0055830 [ CAGAGTAATATTCAAGCCGGGAACGATTTTGTACTTAATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGCCGACCATATTTCGAAAAAAAAAGTGGGAACCAAAAAAAAAAAAAATCCACAAGGGTTTTTGGAATTAACAAAGGGCCAACAAAAAAAAAAAAAATTTCCACAACCCGGACCAAGAAAAAGGTCCCCCAAAGTCCCCGAAAAAGGGTCCAGATCGTCAACCCCGGGCCCAAAGGGAATTTTGAAAGTTTTGAAAACCCCAAAAATCCACGGGGAACCATAAAAACC] consensusID : consensus_2836#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 845 fasta sequence [CCGCGTCGTCGCCTCAGTACTCTATCACTA-AAAGGAAAAGCGAGGATGTCGGACGAGGGGGGATTGTTCATTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGTGGACGTGATCCGAGACAAAGAGACCGGGAGATCTCGCGGGTTTGGCTTTGTGAAATATGAAAGTGTCGAAGACGCGAAGGACGCCATGACGGCGATGAACGGAAAGTCTTTGGACGGCCGGGCGATTCGTGTGGATGAAGCTGGCAAGGGTCTTCGGCCCAGGGGAGGCTTCCAGTCAAGCAGCAGATCCCGGGGGAGATCTGGAAGAGGCAGCTATGGTGGAGACAGAAGCTATGG-CGACGGGAGTTATGGTGAAAGAAGCTATGGCAACAATGACCGGGGCTTTGGAGGCAGCGGTGGCTACAGAAGTGGGGGCTACTCTGGTGGCTACAGAGACAACAGGATGCAGGGTGGATACGAACGCTCCGGGTCCTACCGTGATGGATATGATGGCTATGGTAAGCATCAATGATACGCATTTGTGACGTGAATAAACCTATGTTGGGGCTGTTATGTCTTCAAATGGCATCAAACTAGCCATGTGTGGACGCTGCGGTCCCCAACCCGAAACATTCTCCTCAAAGGATCCAGTTCAGTTCCTTAAAACCTTCTTCCAGCCCCAACATATAAAGCCATGTTTGAAGTCAGCCCCTCAGTTTTGTACCTGAGCCTAAGTTGGTACCTCTAAGCGGGTGCCAGATTTAGGTAGCCCTCCAGCCTTGCTCTGACCAGAGCTTAGCCACACCGACGGGCGAAGGT] [+] EMBL CA591170 [CCGCGTCGTCGCCTCAGTACTCTATCACTA AAAGGAAAAGCGAGGATGTCGGACGAGGGTAAATTGTTCATTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGTGGACGTGATCCGAGACAAAGAGACCGGGAGATCTCGCGGGTTTGGCTTTGTGAAATATGAAAGTGTCGAAGACGCGAAGGACGCCATGACGGCGATGAACGGAAAGTCTTTGGACGGCCGGGCGATTCGTGTGGATGAAGCTGGCAAGGGTCTTCGTCCCAGGGGAGGCTTCCAGTCAAGCAGCAGATCCCGGGGGAGATCTGGAAGAGGCAGCTATGGTGGAGACAGAAGCTATGG CGACAGGAGTTATGGTGAAAGAAGCTATGGCAACAATGACCGGGGCTTTGGAGGCAGCGGTGGCTACAGAAGTGGAGGCTACTCTGGTGGCTACAGAGACAACAGGATGCAGGGTGGATACGAACGCTCCGGGTCCTACCGTGATGGATATGATGGCTATGGTAAGCATCAATGATACGCATTTGTGACGTGAATAAAC ] [+] EMBL FR0059147 [ GTCGCCTCAGTACTCTATCACTATTAAGGAAAAGCGAGGATGTCGGACGAGGGGGGATTGTTCATTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGTGGACGTGATCCGAGACAAAGAGACCGGGAGATCTCGCGGGTTTGGCTTTGTGAAATATGAAAGTGT ] [+] EMBL FR0059445 [ catggGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGTGGACGTGATCCGAGACAAAGAGACCGGGAGATCTCGCGGGTTTGGCTTTGTGAAATATGAAAGTGTCGAAGACGCGAAGGACGCCATGACGGCGATGAACGGAAAGTCTTTGGACGGCCGGGCGATTCGTGTGGATGAAGCTGGCAAGGGTCTTCGGCCCAGGGGAGGCTTCCAGTCAAGCAGCAGATCCCGGGGGAGATCTGGAAGAGGCAGCTATGGTGGAGACAGAAGCTATGGCCGACGGGAGTT ] [+] EMBL FR0062490 [ AGCTATGGCAACAATGACCGGGGCTTTGGAGGCAGCGGTGGCTACAGAAGTGGGGGCTACTCTGGTGGCTACAGAGACAACAGCATGCAGGGTGGATACGAACGCTCCGGGTCCTACCGTGATGGATATGATGGCTATGGTAAGCATCAATGATACGCATTTGTGACGTGAATAAACCTATGTTGGGGCTGTTATGTCTTCAAATGGCATCAAACTAGCCATGTGTGGACGCTGCGGTCCCCAACCCGAAACATTCTCCTCAAAGGATCCAGTTCAGTTCCTTAAAACCTTCTTCCAGCCCCAACATATAAAGCCATGTTTGAAGTCAGCCCCTCAGTTTTGTACCTGAGCCTAAGTTGGTACCTCTAAGCGGGTGCCAGATTTAGGTAGCCCTCCAGCCTTGCTCTGACCAGAGCTTAGCCACACCGACGGGCGAAGGT] consensusID : consensus_2836#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 820 fasta sequence [AGGAGCCAATGTTTGATCCCTATATAAGAAAGGGACTAAGAACCGGATCGTGGCTTTAGTTTCAGGAATACAATGCCCAATTCCAGGGAGTCATTCTCGAATAACAATTTGAAACATTAGGAATGGCTACAA-TTTTTTTTTTTTTAAGATGCCTACAACAAAACTACAAAACTAAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC-CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATCCTCGCTTTTCCTTTTAGTGATAGAGTACTGAGGCGACGACGAGGG] [-] EMBL CA341151 [AGGAGCCAATGTTTGATCCCTATATAAGAAAGGGACTAAGAACCGGATCGTGGCTTTAGTTTCAGGAATACAATGCCCAATTCCAGGGAGTCATTCTCGAATAACAATTTGAAACATTAGGAATGGCTACAATTTTTTTTTTTTTTAAGATGCCTACAACAAAACTACAAAACTAAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTT ] [-] EMBL CA847240 [ AGCCAATGTTTGATCCCTATATAAGAAAGGGACTAAGAACCGGATCGTGGCTTTAGTTTCAGGAATACAATGCCCAATTCCAGGGAGTCATTCTCGAATAACAATTTGAAACATTAGGAATGGCTACAA TTTTTTTTTTTTTAAGATGCCTACAACAAAACTACAAAACTAAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATCCTCGCTTTTCCTTTTAGTGATAGAG ] [-] EMBL CA844594 [ AGGAATGGCTACAA TTTTTTTTTTTTTAAGATGCCTACAACAAACCTACAAAACTAAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTC ] [+] EMBL CA332225 [ TTTTTAAGATGCCTACAACAAAACCACAAAACTAAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCATATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAAGCCTCAGCCAGAGACTTCTCGTTGGTCTCGAAGCTCAGACCTCC ] [-] EMBL CA588513 [ AAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATACGCGCTTTTCCTTTTAGTGATAGAGTACTGAGGCGACtttcaccg] [-] EMBL CA844595 [ AAATCTTTGAAATACCGCCACCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCAGAGGGC ] [-] EMBL CA330425 [ TTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGCAAGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCC ] [-] EMBL CA846604 [ TGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGACAACTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGC ] [-] EMBL CA846751 [ GATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGA ] [-] EMBL CA588967 [ TCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCATATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTTCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATCCTCGCTTTTCCTTTTAGTGATAGAGTACTGAGGCGACGACGCGG ] [-] EMBL BU805860 [ AGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATCCTCGCTTTTCCTTTTAGTGATAGAGTACTGAGGCGACGA ] [-] EMBL CA330861 [ CTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCC ] consensusID : consensus_2836#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 383 fasta sequence [ATATATTTTACGTGCTAAAGCCTATAATTACCTGCGGATACTGCACCAGTGACCTACTTTGAACTGCATGCGCAGATTGAATAACGCACGAGGGCCCGGGGGCTAATTTAGCAAGCGCTACAACTTCTCTCCAAAAATACACAACACACAACACAAATATATAATATTCGCTTTTCTCTCGGTTTGTAGGAAAAGCGAGGATGTCGGACGAGGGTAAATTGTTCATTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGGTAGGTTCAAAACATTTTACCATCGCAGGCGCGCTACCCCGTTAACATTCCCGATAAATAGCAGCTCCGTTTGGGGGTAAAAT] [+] EMBL BU808448 [ATATATTTTACGTGCTAAAGCCTATAATTACCTGCGGATACTGCACCAGTGACCTACTTTGAACTGCATGCGCAGATTGAATAACGCACGAGGGCCCGGGGGCTAATTTAGCAAGCGCTACAACTTCTCTCCAAAAATACACAACACACAACACAAATATATAATATTCGCTTTTCTCTCGGTTTGTAGGAAAAGCGAGGATGTCGGACGAGGGTAAATTGTTCATTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGGTAGGTTCAAAACATTTTACCATCGCAGGCGCGCTACCCCGTTAACATTCCCGATAAATAGCAGCTCCGTTTGGGGGTAAAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2836#1 ------------------------CCGCGTCGTCGCCTCAGTACTCTATCACTAAAAGGA 36 consensus_2836#3 ------------------------------------------------------------ consensus_2836#2 --------------------------------AGGAGCCAATGTTTGATCCCTATATAAG 28 consensus_2836#0 GAATGGGGCATTGTATTCCTGAAACTAAAGCCACGATCCGGTTCTTAGCCCCTTTCTTAT 60 consensus_2836#1 AAAGCGAGGATGTCGGACGAGGGGGGATTGTTCATTGGAGGTCTGAGCTTCGAGACCAAC 96 consensus_2836#3 ------------------------------------------------------------ consensus_2836#2 AAAGGGACTAAG--AACCGGATCGTGGCTTTAGTTTCAGGAATACAATGCCCAATTCCAG 86 consensus_2836#0 ATAGGGATCAAA--CATTGGCTCCTTGCGGCTTTTCAATCAAAGGGTAACAACAATTGAA 118 consensus_2836#1 GAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGTGGACGTGATC 156 consensus_2836#3 ------------------------------------------------------------ consensus_2836#2 GGAGTCATTCTCGAATAACAATTTGAAACATTAGGAATGGCTACAATTTTTTTTTTTTTA 146 consensus_2836#0 GAACTTGCCAAGCAGGTTACATGTTTCTTGTTTTTGATCCCTTATTTCTTTTTTCTATGG 178 consensus_2836#1 CGAGACAAAGAGACCGGGAGATCTCGCGGGTTTGGCTTTGTGAA-ATATGAAAGTGTCGA 215 consensus_2836#3 ----------------ATATATTTTACGTGCTAAAGCCTATAATTACCTGCGGATACTGC 44 consensus_2836#2 AGATGCCTA-----CAACAAAACTACAAAACTAAGGTCAGCAATAACACGTGGACTTTTC 201 consensus_2836#0 GAAATATCAGATGGGGCTTTATTTTCCCAGTTGGGCTCTGACAGAACCAGGTCTTGCCAG 238 * * * * * * consensus_2836#1 AGACGCGAAGGACGCCATGACGGCGATGAACGGAAAGTCTTTGGACGGCCGGGCGATTCG 275 consensus_2836#3 ACCAGTGACCTACTTTG-AACTGC-ATGCGCAGA------TTGAATAACGCACGAGGGCC 96 consensus_2836#2 TTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCT-TGATTCAGGGAGATG 260 consensus_2836#0 GTTTTAAACTGAGGAAAGAATTGC--CGTGCTGAATTCCATTTT-TACTACAGCCGTTAG 295 * * * * * * consensus_2836#1 TGTGGATGAAGCTGGCAAGGGTCTTCGGCCCAGGGGAGGCTTCCAGTCAAGCAGCAGATC 335 consensus_2836#3 CGGGGGCTAATTTAGCAAGCG-CTACAACTTC-------TCTCCAAAAATACA-CAACAC 147 consensus_2836#2 CTTACTCGTGTGTAGCATA-GCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTAT 319 consensus_2836#0 TTTAGCCGAGGCTCCTATATG-TTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGT 354 * * * * consensus_2836#1 CCGGGGGAGATCTGGAAGAGGCAGCTATGGTGGAGACAGAAGCTATGGCGACGGGAGTTA 395 consensus_2836#3 ACAACACAAATATATAATATTCGCTTTTCTCTCGGTTTGTAGGAAAAGCGA--GGATGTC 205 consensus_2836#2 CCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCG 379 consensus_2836#0 GAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGT--CTGCCTAAGGTATCTTCTGCT 412 * * consensus_2836#1 TGGTGAAAGAAGCTATGGCA-ACAATGACCGGGGCTTTGGAGGCAGCGGTGGCTACAGAA 454 consensus_2836#3 GGACGAGGGTAAATTGTTCA-TTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGG 264 consensus_2836#2 CTGCCTCCAAAGCCCCGGTC-ATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCC 438 consensus_2836#0 CAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAAT 472 * ** consensus_2836#1 GTGGGGGCTACTCTGGTGGCTACAGAGACAACAGGATGCAGGGTGGATACGAACGCTCCG 514 consensus_2836#3 CTGAGGC---CTTCGGCAAGTACGGAACCATCGAAA---AGGGTAGGTTCAAA------A 312 consensus_2836#2 ATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGA 498 consensus_2836#0 GTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTT 532 * * * * consensus_2836#1 GGTCCTACCGTGATGGATATGATGGCTATGGTAAGCATCAATGATACGCATTTGTGACGT 574 consensus_2836#3 CATTTTACCATCGCAGGCGCGCTACCC--CGTTAACATTCCCGATAAATAGCAGCTCCGT 370 consensus_2836#2 CTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGCC 558 consensus_2836#0 TGTATGATCAATATTTTTTCTCTGTCA--GTTTGGCTTCATGGAGCCTATTAAATGAACT 590 * * * * * consensus_2836#1 GAATAAACCTATGTTGGGGCTGTTATGTCTTCAAATGGCATCAAACTAGCCATGTGTGGA 634 consensus_2836#3 --TTGGGGGTAAAAT--------------------------------------------- 383 consensus_2836#2 GTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATA 618 consensus_2836#0 GTGGAAAAAGAAAAAAAAAAAAAAAAAAAAAAAACGCCGACCATATTTCGAA---AAAAA 647 consensus_2836#1 CGCTGCGGTCCCCAACCCGAAACATTCTCCTCAAAGGATCCAGTTCAGTTCCTTAAAACC 694 consensus_2836#3 ------------------------------------------------------------ consensus_2836#2 TTTCACAAAGCCAAACCCGCGAGATC--TCCCGGTCTCTTTGTCTCGGATCACGTCCACC 676 consensus_2836#0 AAGTGGGAACCAAAAAAAAAAAAAATCCACAAGGGTTTTTGGAATTAACAAAGGGCCAAC 707 consensus_2836#1 TTCTTCCAGCCCCAACATATAAAGCCATGTTTGAAGTCAGCCCCTCAGTTTTGTACCTGA 754 consensus_2836#3 ------------------------------------------------------------ consensus_2836#2 TTTTCGATGGTTC--CGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGA 734 consensus_2836#0 AAAAAAAAAAAAAATTTCCACAACCC--GGACCAAGAAAAAGGTCCCCCAAAGTCCCCGA 765 consensus_2836#1 GCCTAAGTTGGTACCTCTAAGCGGGTGCCAGATTTAGGTAGCCCTCCAGCCTTGCTCTGA 814 consensus_2836#3 ------------------------------------------------------------ consensus_2836#2 AGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATCCTCGCTTTTCCTTTTAGTG 794 consensus_2836#0 AAA-AGGGTCCAGATCGTCAACCCCGGGCCCAAAGGGAATTTTGAAAGTTTTGAAAACCC 824 consensus_2836#1 CCAGAGCTTAGCCACACCGACGGGCGAAGGT 845 consensus_2836#3 ------------------------------- consensus_2836#2 ATAGAGTACTGAGGCGACGACGAGGG----- 820 consensus_2836#0 CAAAAATCCACGGGGAACCATAAAAACC--- 852 |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |