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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2844#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 693 fasta sequence
[GACCAAAACTGGGTACCGGGCCCCCCCTCGGGGTTTTTTTTTTTTTTTTTAATGGAATCATTCAAAACATTTATTGGAACA--ATATTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCGAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATCCCCTCTCCGACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGTCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCA-GCATGCACACGGCCCTCTGGACCTTGGCCAGGTCTCCTCC-AGGGACCACGGTCGGGGGCTGGTAGTTGATGCCCACCTTGAAACCAGTTGGACACCAGTCAACAAACTGGATGCTTCGCTTGGCCTTGATGGGGGCAAGGCCAAATTTGAC]
[-] EMBL FR0057161 [GACCAAAACTGGGTACCGGGCCCCCCCTCGGGGTTTTTTTTTTTTTTTTTAATGGAATCATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACC ]
[+] EMBL CA331274 [ TTTTTTTTGGAAACATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGGAAACGGAATCATTCGAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATTCCCTCTCCGACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGGCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCA GCATGCACACGGCCCTCTGGACCTTGGCCAGGTCTCCTCC AGGGACCACGGTCGGGGGCTGGTAGTTGATGCCCACCTTGAAACCAGTTGGACACCAGTCAACAAACTGGATGCTTCGCTT ]
[+] EMBL CA329713 [ TTTAAATGGAATCATTCAAAACATCTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCGAAACATTTGGAATGACATTTAACCCATTCAAACCTCTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATTCCCTCTCCGACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGTC ]
[+] EMBL CA329722 [ ATCATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACCGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCAAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCC ]
[+] EMBL CA329333 [ ATCATTCAAAACATTTATTGGCCCAATATATACAAACCTTTGGTATTTCAACTGGAACCGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCAAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATCCCCTCTCCGACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGGCAAACTTGTGGACCAATCGAGCCCAGACCTCAACAATGGCGGTGGTGTTGCTCA ACATGCACACGGACCCCTGAAACTTAGACAAATCTCCTCC AAAGAACACAAACAAAGGCTG ]
[-] EMBL CA330996 [ TCATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACCGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCGAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATCCCCTCTCCCACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGTCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCATGCATGCACACGGCCCTCTGGACCTTGGCCAGGTCTCCTCC AGGGACCAC ]
[+] EMBL CA329547 [ TCATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCGAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATTCCCTCTCCGACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGTCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCA GCATGCACACGGCCCTCTGGACCTTGGCCAGGTCTCCTCC AGGGACCACGGTCGGGGGTTGGTAGTTGATGCCCACCTTGAAACCAGTTGGACACCAGTCAACAAACTGGATGCTTCGCTTGGCCTTGATGGt ]
[+] EMBL CA331465 [ CATTCAAAACATTTATTTTTAC ACCCTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCGAAACATTTGGAATGACTTTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATTCCCTCTCCGACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGTCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCA ACATGCACACGGCCCTCTGGGACTTGGGCAGGGCTCCTCCAAGGAACCACGGTCGGGGGCTGGGAACTGGTGCCCACCTTGAACCCCGGTGGGACCCAGGCAAAAACCTGGAGGCTTCGCTTGGTCTTGATGAGGGCAAGGCCAAATTTGAC]
[+] EMBL CA331385 [ CATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCGAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATTCCCTCTCCGACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGTCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCA GCATGCACACGGCCCTCTGGACCTTGGCCAGGTCTCCTCC AGGGACCACGGTCGGGGGCTGGTAGTTGATGCCCACCTTGAAACCAGTTGGACACCAGTCAACAAACTGGATGCTTCG ]
[+] EMBL CA329290 [ CATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACCGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCAAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATCCCCTCTCCGACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGTCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCA GCATGCACACGGCCCTCTGGACCTTGGCCAGGTCTCCTCC AGGGACCACGGTCGGGGGCTGGTAGTTGATGCCCACCTTGAAACCAGTTGGACACCAGTCAAa ]
[+] EMBL CA329795 [ ATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACCGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCAAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATCCCCTCT ]
[+] EMBL CA329244 [ ATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCGAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATTCCCTCTCCGACGTACCAGTGGA ]
[+] EMBL CA332694 [ ATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCGAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATTCCCTCTCCGACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGTCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCA GCATGCACACGGCCCTCTGGACCTTGGCCAGGTCTCCTCC AGGGACCACGGTCGGGGGCTGGTAGTTGATGCCCACCTTGAAACCAGTTGGACACCAGTCAACAAACTGGATGCTTCG ]
[-] EMBL CA845659 [ ATTCAAAACATTTATTGGAACA ATATTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTCAAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATAGAGACCc ]
[-] EMBL FR0056167 [ TTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAAACGGAATCATTCGAAACATTTGGAATGACATTTAACCCATTCAAACCTTTGGGATTTAAACTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATCCCCTCTCCGACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGTCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCA GCATGCACACGGCCCTCTGGACCTTGGCCAG ]
[-] EMBL CA330921 [ TTGAACCCGCAAGCAGTTATGAGCTACTTGCACTCAATCAACTGAAACCCATGTTTATAATATGAATATTATAAACCAAAAATGAGGCCAAGGTAACCGGAATCATTCGAAACATTTGGAATCGCATTTAACCCATTCAATCCTTTGGGATTTACCCTGGGAACCTCTAATACTCCTCGCCTTCGTCTTCCTCCCCGCCGCTGTCGGTGCCCAAAAAATCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAACTCTCCCTCCTCCATCCCCTCTCCCACGTACCAGTGGACAAAGGCTCTCTTGGCGTACATCAGGTCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCA GCATGCACACGGCCCTCTGGACCTTGGCCAGGTCTCCTCC AGGGACCAC ]
[+] EMBL CA331529 [ TCTTCCTCCCCGACGCTGTCGGTGCCCACCTCTTCGTAATCCTTCTCCAGGGCAGCCATGTCCTCTCTGGCCTCGGAGAAATCTCCCTCCTCCATCCCCTCTCCGACGTACCAATGGACAAAAGCTCTCTTGGCGTACATCAGGGCGAACTTGTGGTCCAGTCGAGCCCA ]
consensusID : consensus_2844#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 646 fasta sequence
[TGACAATGATGAGCTTTATGTAGAAACAAAACAAGAATACATTCTTTTAATACTCTTCTCCCTCTTCTCCCTCGTCTCCTACACTATCGGTTCCCACCTCCTCATAATCCTTCTCCAGAGCAGCCATGTCTTCTCTGGCCTCGGAGAATTCTCCCTCCTCCATACCCTCACCCACATACCAGTGAACAAAGGCTCGTTTGGCGTACATCAGGTCAAACTTGTGATCCAGACGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCAGCATGCACACAGCCCTCTGGACCTTGGCCAGATCTCCACCAGGAACAACAGTGGGGGGCTGGTAGTTGATGCCAACCTTGAAACCGGTGGGGCACCAGTCCACAAACTGGATGCTGCGTCTGCTCTTGATGGTGGCAATAGCAGCGTTCACATCTTTGGGCACCACGTCACCACGAAACAGAAGGCAACAGGCCATGTACTTGCCGTGACGAGGGTCACACTTCACCAGCTGATTGGCTGGCTCAAAGCAAGCGGTGGTGATCTCAGCCACGGTCATCTGCTCATGGTAAGCTTTCTCAGCAGAGATGAC-GGGGGCATATGT-GGCCAGTGGGAAATGGATACGGGGATAAGGCACCAAGTTGGTCTGGAACTCTGTCAG]
[+] EMBL CA331256 [TGACAATGATGAGCTTTATGTAGACACAAAACAAGAATACATTCTTTTAATACTCTTCTCCCTCTTCTCCCTCGTCTCCTACACTATCGGTTCCCACCTCCTCATAATCCTTCTCCAGAGCAGCCATGTCTTCTCTGGCCTCGGAGAATTCTCCCTCCTCCATACCCTCACCCACATACCAGTGAACAAAGGCTCGTTTGGCGTACATCAGGTCAAACTTGTGATCCAGACGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCAGCATGCACACAGCCCCCTGGACCTTGGCCAGATCTCCACCAGGAACAACAGTGGGGGGCTGGTAGTTGATGCCAACCTTGAAACCGGTGGGGCACCAGTCCACAAACTGGATGCTGCGTCTGCTCTTGATGGTGGCAATAGCAGCGTTCACATCTTTGGGCACCACGTCACCACGAAACAGAAGGCAACAGGCCATGTACTTGCCGTGACGAGGGTCACACTTCACCAGCTGATTGGCTGGCTCAAAGCAAGCGGTGGTGATCTCAGCCACGGTCATCTGCTCATGGTAAGCTTTCTCAGCAGAGATGAC GGGGGCATATGT GGCCAGTGGGAAATGGATACGGGGATAAGGCACCAAGTTGGTCTGGAACTCTGTCAG]
[+] EMBL CA329864 [TGACAATGATGAGCTTTATGTAGAAACAAAACAAGAATACATTCTTTTAATACTCTTCTCCCTCTTCTCCCTCGTCTCCTACACTATCGGTTCCCACCTCCTCATAATCCTTCTCCAGAGCAGCCATGTCTTCTCTGGCCTCGGAGAATTCTCCCTCCTCCATACCCTCACCCACATACCAGTGAACAAAGGCTCGTTTGGCGTACATCAGGTCAAACTTGTGATCCAGACGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCAGCATGCACACAGCCCCCTGGACCTTGGCCAGATCTCCACCAGGAACAACAGTGGGGGGCTGGTAGTTGATGCCAACCTTGAAACCGGTGGGGCACCAGTCCACAAACTGGATGCTGCGTCTGCTCTTGATGGTGGCAATAGCAGCGTTCACATCTTTGGGCACCACG ]
[+] EMBL CA331234 [ GACAATGATGAGCTTTATGTAGCACAAAAACAAGAATACATTCTTTTAATACTCTTCTCCCTCTTCTCCCTCGTCTCCTACACTATCGGTTCCCACCTCCTCATAATCCTTCTCCAGAGCAGCCATGTCTTCTCTGGCCTCGGAGAATTCTCCCTCCTCCATACCCTCACCCACATACCAGTGAACAAAGGCTCGTTTGGCGTACATCAGGTCAAACTTGTGATTCAGACGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCAGCATGCACACAGCCCTCTGGACCTTGGCCAGATCTCCACCAGGAACAACAGTGGGGGGCTGGTAGTTGATGCCAACCTTGAAACCGGTGGGGCACCAGTCCACAAACTGGATGCTGCGTCTGCTCTTGATGGTGGCAATAGCAGCGTTCACATCTTTGGGCACCACGTCACCACGAAACAGAAGGCAACAGGCCATGTACTTGCCGTGACGAGGGTCACACTTCACCAGCTGATTGGCTGGCTCAAAGCAAGCGGTGGTGATCTCAGCCACGGCCATCTGCTCATGGTAAGCTTTCTCAGCAGAGATGAA CGGGGCATATGT GGCCAGTGGGAAATGGAT ]
[+] EMBL CA329840 [ GACAATGATGAGCTTTATGTAGAAACAAAACAAGAATACATTCTTTTAATACTCTTCTCCCTCTTCTCCCTCGTCTCCTACACTATCGGTTCCCACCTCCTCATAATCCTTCTCCAGAGCAGCCATGTCTTCTCTGGCCTCGGAGAATTCTCCCTCCTCCATACCCTCACCCACATACCAGTGAACAAAGGCTCGTTTGGCGTACATCAGGTCAAACTTGTGATCCAGACGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCAGCATGCACACAGCCCTCTGGACCTTGGCCAGATCTCCACCAGGAACAACAGTGGGGGGCTGGTAGTTGATGCCAACCTTGAAACCGGTGGGGCACCAGTCCACAAACTGGATGCTGCGTCTGCTCTTGATGGTGGCAATAGCAGCGTTCACATCTTTGGGCACCACGTCACCACGAAACAGAAGGCAACAGGCCATGTACTTGCCGTGACGAGGGTCACACTTCACCAGCTGATTGGCTGGCTCAAAGCAAGCGGTGGTGATCTCAGCCACGGNCATCTGCTCATGGTAAGCTTTCTCAGCAAAGATGAC GGGGGCATATGT GGCCAGTGGGAAATGGATACG ]
[+] EMBL CA329644 [ ACAATGATGAGCTTTATGTTTAAACCAAACAAGAATACATTCTTTTAATACTCTTCTCCCTCTTCTCCCTCGTCTCCTACACTATCGGTTCCCACCTCCTCATAATCCTTCTCCAGAGCAGCCATGTCTTCTCTGGCCTCGGAGAATTCTCCCTCCTCCATACCCTCACCCACATACCAGTGAACAAAGGCTCGTTTGGCGTACATCAGGTCAAACTTGTGATCCAGACGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCAGCATGCACACAGCCCTCTGGACCTTGGCCAGATCTCCACCAGGAACAACAGTGGGGGGCTGGTAGTTGATGCCAACCTTGAAACCGGTGGGGCACCAGTCCACAAACTGGATGCTGCGTCTGCTCTTGATGGTGGCAATAGCAGCGTTCACATCTTTGGGCACCACGTCACCACGAAACAGAAGGCAACAGGCCATGTACTTGCCGTGACGAGGGTCACACTTCACCAGCTGATTGGCTGGCTCAAAGCAAGCGGTGGTGATCTCAGCCACGGTCATCTGCTCATGGTAAGCTTTCTCAGCAGAGATGAC GGGGGCATATGT GGGCAGTGGGAAATGGATACGGGGATAAGG ]
[+] EMBL CA329465 [ AATGATGAGCTTTATGTAGAAACAACACAAGAATACATTCTTTTAATACTCTTCTCCCTCTTCTCCCTCGTCTCCTACACTATCGGTTCCCACCTCCTCATAATCCTTCTCCAGAGCAGCCATGTCTTCTCTGGCCTCGGAGAATTCTCCCTCCTCCATACCCTCACCCACATACCAGTGAACAAAGGCTCGTTTGGCGTACATCAGGTCAAACTTGTGATCCAGACGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCAGCATGCACACAGCCCTCTGGACCTTGGCCAGATCTCCACCAGGAACAACAGTGGGGGGCTGGTAGTTGATGCCAACCTTGAAACCGGTGGGGCACCAGTCCACAAACTGGATGCTGCGTCTGCTCTTGATGGTGGCAATAGCAGCGTTCACATCTTTGGGCACCACGTCACCACGAAACAGAAAGCAACAGGCCATGTACTTGCCGTGACGAGGGTCACACTTCACCAGCTGATTGGGTGGGTCAAAGCAAGGGGTGGTGATCTCAGCCACGGTCATCTGCTCATGGAAAGTTTCCTCA CAAAGATGAC GGGGGCATATGT GGGCAGGGGGAAATGGATACGGGGATA ]
[+] EMBL CA329531 [ AATGATGAGCTTTATGTAGATACACACCAAGAATACATTCTTTTAATACTCTTCTCCCTCTTCTCCCTCGTCTCCTACACTATCGGTTCCCACCTCCTCATAATCCTTCTCCAGAGCAGCCATGTCTTCTCTGGCCTCGGAGAATTCTCCCTCCTCCATACCCTCACCCACATACCAGTGAACAAAGGCTCGTTTGGCGTACATCAGGTCAAACTTGTGATCCAGACGAGCCCAGGCCTCAGCGATGGCGGTGGTGTTGCTCAGCATGCACACAGCCCTCTGGACCTTGGCCAGATCTCCACCAGGAACAACAGTGGGGGGCTGGTAGTTGATGCCAACCTTGAAACCGGTGGGGCACCAGTCCACAAACTGGATGCTGCGTCTGCTCTTGATGGTGGCAATAGCAGCGTTCACATCTTTGGGCACCACGTCACCACGAAACAGAAGGCAACAGGCCATGTACTTGCCGTGACGAGGGTCACACTTCACCAGCTGATTGGCTGGCTCAAAGCAAGCGGGGGTGATCTCAGCCACGGTCATCTGCTCATGGTAAGCTTTCTCAGCAGAGATGACGGGGGGCATATGTGGGCCAGGGGGAAAGGGATA ]
consensusID : consensus_2844#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence
[ACACACACACACACAAAACTAATAGTCACAGCATCTCTCCTGTACTGTCATTTTTCAGCGTGGATGCACTTCCATAACTAATGATCTGTAGCAAAGAACAATGGTAGAAAACCTAAACTTTAGTTCTTTCAGTTTAACAATTAACAAATAAATAACATGCAAATTAACGTCTCAAATATTTCTGTTATTCTCAAGATCTTGTCTGTTATATCAATGGGCAAATGACAGAGAAGCCTGTCTAATATTCTTCTCCTTCTTCATCCTCCTCGAATGAGTCGAGCCCGACCTCTTCGTAATCCTTCTCCAGGGCAGCCATGTCTTCTCTGGCCTCTGAAAACTCTCCCTCCACCATTCCCTCCCCGACATACCAGTGGACGAAGGCTCTCTTGGCATACATGAGGTCAAACTTGTGGTCTAGACGGGCCCAGGCCTCAGCGATGGCTGTGGTGTTGCTCAGCATGCACACGGCCCTCTGCA]
[-] EMBL FR0055404 [ACACACACACACACAAAACTAATAGTCACAGCATCTCTCCTGTACTGTCATTTTTCAGCGTGGATGCACTTCCATAACTAATGATCTGTAGCAAAGAACAATGGTAGAAAACCTAAACTTTAGTTCTTTCAGTTTAACAATTAACAAATAAATAACATGCAAATTAACGTCTCAAATATTTCTGTTATTCTCAAGATCTTGTCTGTTATATCAATGGGCAAATGACAGAGAAGCCTGTCTAATATTCTTCTCCTTCTTCATCCTCCTCGAATGAGTCGAGCCCGACCTCTTCGTAATCCTTCTCCAGGGCAGCCATGTCTTCTCTGGCCTCTGAAAACTCTCCCTCCACCATTCCCTCCCCGACATACCAGTGGACGAAGGCTCTCTTGGCATACATGAGGTCAAACTTGTGGTCTAGACGGGCCCAGGCCTCAGCGATGGCTGTGGTGTTGCTCAGCATGCACACGGCCCTCTGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2844#0 GACCAAAACTGGGTACCGGGCCCCCCCTCGGGGTTTTTTTTTTTTTTTTTAATGGAATCA 60
consensus_2844#1 ------------------------------------------------------------
consensus_2844#2 ------------------------------------------------------------
consensus_2844#0 TTCAAAACATTTATTGGAACAATATTCAAACCTTTGGTATTTCAACTGGAACTGAGCTTC 120
consensus_2844#1 ------------------------------------------------------------
consensus_2844#2 ----------------------------------ACACACACACACACAAAACTAATAGT 26
consensus_2844#0 AAAAGAATCTGACAACTGCAGGCTTTTGGTAGTGGGAATTGAACCCGCAAGCAGTTATGA 180
consensus_2844#1 ------------------------------------------------------------
consensus_2844#2 CACAGCATCTCTCCTGTACTGTCATTTTTCAGCGTGGATGCACTTCCATAACTAATGATC 86
consensus_2844#0 GCTACTTGCACTCAATCAACTGAAACCCATGTTT--ATAATATGAATATTATAAACCAAA 238
consensus_2844#1 ------------------------------------------------------------
consensus_2844#2 TGTAGCAAAGAACAATGGTAGAAAACCTAAACTTTAGTTCTTTCAGTTTAACAATTAACA 146
consensus_2844#0 AATGAGGCCAAGGTAAACGGAATCATTCGAAACATTTGGAAT----GACATTTAACCCAT 294
consensus_2844#1 -----------------------------------TGACAAT----GATGAGCTTTATGT 21
consensus_2844#2 AATAAATAACATGCAAATTAACGTCTCAAATATTTCTGTTATTCTCAAGATCTTGTCTGT 206
** * *
consensus_2844#0 TCAAACCTTTGGGATTTAAACTGGGAACCT--CTAATACTCCTCGCCTTCGTCTTCCTC- 351
consensus_2844#1 AGAAAC-----AAAACAAGAATACATTCTT--TTAATACTCTTCTCCCTCTTCTCCCTCG 74
consensus_2844#2 TATATCAATGGGCAAATGACAGAGAAGCCTGTCTAATATTCTTCTCCTTCTTCATCCTC- 265
* * * * * ***** ** ** ** ** ** ****
consensus_2844#0 --CCCGACGCTGTCGGTGCCCACCTCTTCGTAGTCCTTCTCCAGGGCAGCCATGTCCTCT 409
consensus_2844#1 TCTCCTACACTATCGGTTCCCACCTCCTCATAATCCTTCTCCAGAGCAGCCATGTCTTCT 134
consensus_2844#2 --CTCGAATGAGTCGAGCCCGACCTCTTCGTAATCCTTCTCCAGGGCAGCCATGTCTTCT 323
* * *** ** ***** ** ** *********** *********** ***
consensus_2844#0 CTGGCCTCGGAGAACTCTCCCTCCTCCATCCCCTCTCCGACGTACCAGTGGACAAAGGCT 469
consensus_2844#1 CTGGCCTCGGAGAATTCTCCCTCCTCCATACCCTCACCCACATACCAGTGAACAAAGGCT 194
consensus_2844#2 CTGGCCTCTGAAAACTCTCCCTCCACCATTCCCTCCCCGACATACCAGTGGACGAAGGCT 383
******** ** ** ********* **** ***** ** ** ******** ** ******
consensus_2844#0 CTCTTGGCGTACATCAGGTCGAACTTGTGGTCCAGTCGAGCCCAGGCCTCAGCGATGGCG 529
consensus_2844#1 CGTTTGGCGTACATCAGGTCAAACTTGTGATCCAGACGAGCCCAGGCCTCAGCGATGGCG 254
consensus_2844#2 CTCTTGGCATACATGAGGTCAAACTTGTGGTCTAGACGGGCCCAGGCCTCAGCGATGGCT 443
* ***** ***** ***** ******** ** ** ** ********************
consensus_2844#0 GTGGTGTTGCTCAGCATGCACACGGCCCTCTGGACCTTGGCCAGGTCTCCTCCAGGGACC 589
consensus_2844#1 GTGGTGTTGCTCAGCATGCACACAGCCCTCTGGACCTTGGCCAGATCTCCACCAGGAACA 314
consensus_2844#2 GTGGTGTTGCTCAGCATGCACACGGCCCTCTGCA-------------------------- 477
*********************** ******** *
consensus_2844#0 ACGGTCGGGGGCTGGTAGTTGATGCCCACCTTGAAACCAGTTGGACACCAGTCAACAAAC 649
consensus_2844#1 ACAGTGGGGGGCTGGTAGTTGATGCCAACCTTGAAACCGGTGGGGCACCAGTCCACAAAC 374
consensus_2844#2 ------------------------------------------------------------
consensus_2844#0 TGGATGCTTCGCTTGGCCTTGATGGGGGCAAGGCCAAATTTGAC---------------- 693
consensus_2844#1 TGGATGCTGCGTCTGCTCTTGATGGTGGCAATAGCAGCGTTCACATCTTTGGGCACCACG 434
consensus_2844#2 ------------------------------------------------------------
consensus_2844#0 ------------------------------------------------------------
consensus_2844#1 TCACCACGAAACAGAAGGCAACAGGCCATGTACTTGCCGTGACGAGGGTCACACTTCACC 494
consensus_2844#2 ------------------------------------------------------------
consensus_2844#0 ------------------------------------------------------------
consensus_2844#1 AGCTGATTGGCTGGCTCAAAGCAAGCGGTGGTGATCTCAGCCACGGTCATCTGCTCATGG 554
consensus_2844#2 ------------------------------------------------------------
consensus_2844#0 ------------------------------------------------------------
consensus_2844#1 TAAGCTTTCTCAGCAGAGATGACGGGGGCATATGTGGCCAGTGGGAAATGGATACGGGGA 614
consensus_2844#2 ------------------------------------------------------------
consensus_2844#0 --------------------------------
consensus_2844#1 TAAGGCACCAAGTTGGTCTGGAACTCTGTCAG 646
consensus_2844#2 --------------------------------
|
|||||||
| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |