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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2856#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 732 fasta sequence
[ACCAAAAATTGGGACCGGGGCCCCCCCCGGGGTTTTTTTTTTTTTTTTTTCCAAGGAAATTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTGGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT-CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG-AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCTCAGCCACGGCCGTGGTATTGTCCCAGTCAGTCATGCTGTCTGCCGTTCTGTACCACACTTC]
[-] EMBL FR0057212 [ACCAAAAATTGGTACCGGGGCCCCCCCCGGGGTTTTTTTTTTTTTTTTT GAAATTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTGGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGAC ]
[-] EMBL FR0057202 [ CCAAAACTTGGGACCGGGGCCCCCCCCGGGGCTTTTTTTCTTTTTTTT GAAATTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTGGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTC ]
[-] EMBL FR0057109 [ CCTGGGGTTTTTTTTTTTTTTTTTTTTCCAAGGAAATTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTGGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCA ]
[-] EMBL CA846820 [ TCCAAGGAAATTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTGGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCgtgc ]
[+] EMBL CA329681 [ TTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTGGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCTCAGCCACGGGCGTGGT ]
[-] EMBL CA844933 [ TTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTGGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGA ]
[+] EMBL CA332215 [ CCAAATTTATTTGTTAAAAAGCAAACGCGTTTAACGGTTGGACTTGGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGGTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCTCAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGGTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGACAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGGCATCAGTTTCTTGCCGTTGGTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCATGGGTCTC ]
[-] EMBL FR0056068 [ CGGTTTGACTTGGCAACTCTCTCCAACTCGTCTTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCA ]
[-] EMBL BU805686 [ GGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCTCAGCCACGGCCGTGGTATTGTCCCAGTCAGTCATGCTGTCTGCCGTTCTGTACCACACT ]
[-] EMBL BU807885 [ AACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCTCAGCCACGGCCGTGGTATTGTCCCAGTCAGTCATGCTGTCTGCCGTTCTGTACCACACTTC]
[-] EMBL CA330112 [ AACTCTCTCCAAGTAGTCATTCTTCTTGATAGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTATGCAATCGTCTTGATGTTCCTGAAAGCAGCTTGTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGTTCACATCCTCAGCATACGTCGAGTTGGTGCTTc ]
[-] EMBL CA588959 [ TCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGATCATCGGCCAGACACTATGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGCCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCTTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCCCGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTCGGCGTATTTCTCCTTCTCAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCT ]
[-] EMBL CA591284 [ CTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATCCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCTCAGCCACGGCCGTGGTATTGTCCCAGTTAGTCATGCTGTCTGCCGTTCTGTACCACACTTC]
[+] EMBL CA588799 [ ACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGT ]
[+] EMBL CA588881 [ TTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCT ]
[-] EMBL CA844919 [ CTTGATCGCGTAAGAGTTAGATGAGCCTTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCTCAGCCACGGCCGTGGTATT ]
[+] EMBL CA588878 [ cctTTGAGCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAA ]
[-] EMBL FR0055913 [ TCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGATCCAGCTCATCGCCCAGACACTCTGCAATCGTCGTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGCCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTA ]
[-] EMBL CA844846 [ GTAAGAGTTAGATGAGCCCTTGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATAA AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCTCAGCCACGGCCGTGGTA GGTCCCAGTCAGTCATG ]
[-] EMBL FR0055287 [ AGAGTTAGATGAGCCCTTGGCTGCATTGCT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGTGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCGC ]
[-] EMBL FR0055854 [ TGGCTGCATTGAT CAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTA ]
[-] EMBL FR0055933 [ GCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGNGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGT ]
[-] EMBL FR0056132 [ CAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGG CACATCCACAGCCTGCCTCCTGACCGTACTTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCTCAGCCACG ]
[-] EMBL FR0055636 [ TGCAATCGTCATGATGTNCCTGACCGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGGAAGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCT ]
[-] EMBL FR0058020 [ CATCCACAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGG AGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCTCAGCCACGGCCGTGGTATTGTCCCAGT ]
consensusID : consensus_2856#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 724 fasta sequence
[CAGCACCAAGATGGCCTGGTTGCCTCTCGGGAGGGGGGACACATCCCCAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGAGGAGGGCATGGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGGAGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTTTCAGCCACGGCCGTGGTATTGTAACAGTCAGTCATGCTGCTCGTGCCGAATTCGGCACGAGCTCGTGCNGAATTCGGCACGAGCGGCACGAGCTCTGTTCGATGGTCCTTTTGTTCTACTTCTTGTCCATTTTAACAGCCAGAGGCCCAGTGTGTCCACTCACAGTGTGTGTCAGGAGCTCAGCACTACAGCTTCATTGTCAAACTCTGCACTTCCAACTGAAAAAGACAAACCACTTAGTAACAACAGCACAAACCAGGAGCCAGACCCGACTATTCTTTAGCGGCATTCCCATTGACC]
[-] EMBL CA588872 [CAGCACCAAGATGGCCTGGTTGCCTCTCGGGAGGGGGGACACATCCCCAGCCTGCCTCCTGACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGAGGAGGGCATGGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGGAGTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTTTCAGCCACGGCCGTGGTATTGTAACAGTCAGTCATGCTGCTCGTGCCGAATTCGGCACGAGCTCGTGCNGAATTCGGCACGAGCGGCACGAGCTCTGTTCGATGGTCCTTTTGTTCTACTTCTTGTCCATTTTAACAGCCAGAGGCCCAGTGTGTCCACTCACAGTGTGTGTCAGGAGCTCAGCACTACAGCTTCATTGTCAAACTCTGCACTTCCAACTGAAAAAGACAAACCACTTAGTAACAACAGCACAAACCAGGAGCCAGACCCGACTATTCTTTAGCGGCATTCCCATTGACC]
consensusID : consensus_2856#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 251 fasta sequence
[GGAAATTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTGGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGATCAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACACTCGTGCCGAATTCGG]
[-] EMBL CA329949 [GGAAATTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTGGCAACTCTCTCCAACTCGTCCTTCTTCTTGATCGCGTAAGAGTTAGATGAGCCCTTGGCTGCATTGATCAGCTCATCGGCCAGACACTCTGCAATCGTCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTGTGCACAGCAGCCAGATGGCCTGGTTGACTCTCCGGAGGGGGGACACACTCGTGCCGAATTCGG]
[-] EMBL CA330708 [GGAAATTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTGG ]
[-] EMBL CA330215 [GGAAATTGTCCAAATTTATTTGTTAGAAAGCAAACGCGTTTAACGGTTGGACTTG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2856#0 ------------------------------------------------------------
consensus_2856#2 ------------------------------------------------------------
consensus_2856#1 CAGCACCAAGATGGCCTGGTTGCCTCTCGGGAGGGGGGACACATCCCCAGCCTGCCTCCT 60
consensus_2856#0 -----------------------ACCAAAAATTGGGACCGGGGCCCCCCCCGGGGTTTTT 37
consensus_2856#2 ------------------------------------------------------------
consensus_2856#1 GACCGTACCTGCACGACCAATACGGGTGGAATCCTCACGGGGCCCGCTGTTGAGGAGGGC 120
consensus_2856#0 TTTTTTTTTTTTTCCAAGGAAATTGTCCAAATTTATTTGTTAGAAAGC-----AAACGCG 92
consensus_2856#2 -----------------GGAAATTGTCCAAATTTATTTGTTAGAAAGC-----AAACGCG 38
consensus_2856#1 ATGGACCAAGACCTGGAGGGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTG 180
** *** ** * * * * * ** * ** *
consensus_2856#0 TTTAACGGTTGGACTTGGCAACTCTCTCCAAC--TCGTCCTTCTTCTTGATCGCGTAAGA 150
consensus_2856#2 TTTAACGGTTGGACTTGGCAACTCTCTCCAAC--TCGTCCTTCTTCTTGATCGCGTAAGA 96
consensus_2856#1 CTTGACAATGCGTACAGTCATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGGA 240
** ** * * * ** * * ** * * ** * *** **
consensus_2856#0 GTTAGATGAGCCCTTGGCTGCATTGATCAGCTCATCGGCCAGACACTCTGCAAT----CG 206
consensus_2856#2 GTTAGATGAGCCCTTGGCTGCATTGATCAGCTCATCGGCCAGACACTCTGCAAT----CG 152
consensus_2856#1 GTTGGTCAGACGCTCCACGATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACG 300
*** * * ** * * * * * * * * * *** **
consensus_2856#0 TCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTG-TGCACAGCAGCCAGATGGCCTGG 265
consensus_2856#2 TCTTGATGTTCCTGAACGCAGCTTCTCGTGCTCCTG-TGCACAGCAGCCAGATGGCCTGG 211
consensus_2856#1 TCCTGCAGAGTGTGGCAGGTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAG 360
** ** * ** * *** *** * ** * ******* ** *
consensus_2856#0 TTGACTCTCCGGAGGGGGGACA-CATCCACAGCCTGCCTCCTGACCGTACCTGCACGACC 324
consensus_2856#2 TTGACTCTCCGGAGGGGGGACA-CACTCGTG--CCGAATTCGG----------------- 251
consensus_2856#1 GGAGATGTCATTAATCTGGACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGG 420
* ** * ***** ** * * *
consensus_2856#0 AATACGGGTGGAATCCTCACGGGGCCCGCTGTTGATGATGGCATTGACCAAGACCTGGAG 384
consensus_2856#2 ------------------------------------------------------------
consensus_2856#1 GGTTTCAGCCACGGCCGTGGTATTGTAACAGTCAGTCATGCTGCTCGTGCCGAATTCGGC 480
consensus_2856#0 GGGATTCTCTCCAGTCAGCAGATGGATGATCTCGAAGGCGTGCTTGACAATGCGTACAGT 444
consensus_2856#2 ------------------------------------------------------------
consensus_2856#1 ACGAGCTCGTGCNGAATTCGGCACGAGCGGCACGAGCTCTGTTCGATGGTCCTTTTGTTC 540
consensus_2856#0 CATCAGTTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGGAGTTGGTCAGACGCTCCAC 504
consensus_2856#2 ------------------------------------------------------------
consensus_2856#1 TACTTCTTGTCCATTTTAACAGCCAGAGGCCCAGTGTGTCCACTCACAGTGTGTGTCAGG 600
consensus_2856#0 GATGGGACACTGGGCCTTGCGGAAGCGTTTGGCAGCATAACGTCCTGCAGAGTGTGGCAG 564
consensus_2856#2 ------------------------------------------------------------
consensus_2856#1 AGCTCAGCACTACAGCTTCATTGTCAAACTCTGCACTTCCAACTGAAAAAGACAAACCAC 660
consensus_2856#0 GTACTTGGCGTATTTCTCCTTCACAGCAATGTAATCCTGCAGGGAGATGTCATTAATCTG 624
consensus_2856#2 ------------------------------------------------------------
consensus_2856#1 TTAGTAACAACAGCACAAACCAGGAGCCAGACCCGACTATTCTTTAGCGGCATTCCCATT 720
consensus_2856#0 GACATCATCGGTGCTCCATTTGCCAAAGAGCTTAATCTCAGGGGTCTCAGCCACGGCCGT 684
consensus_2856#2 ------------------------------------------------------------
consensus_2856#1 GACC-------------------------------------------------------- 724
consensus_2856#0 GGTATTGTCCCAGTCAGTCATGCTGTCTGCCGTTCTGTACCACACTTC 732
consensus_2856#2 ------------------------------------------------
consensus_2856#1 ------------------------------------------------
|
|||||||
| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |