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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2873#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 797 fasta sequence
[TCTGTCGGGGCCGCGGCTGCACGACGAGAACATGGCTGTGATGAAATGAGCTGCGGCGTCCACGTCCCCATCGTCTCCTTGATATTCGGAAAAGTAGAGTCTCAGGTGTCTCCCGGAGTGACGGATCTTCTCCTGGAAAAGGTCGGTTTTGTTCATGAGCAGAATCACTGAGGTCCTCCTGAAGATGCCGTTGGCGCAGGTGGAGGCAAAAAGTTCTAAACTCTCCTGGAGTCGATTCACTGGGGAAGCCTCCATTAGCGTCGTGTCGTAGCTGCTGAGAGCCGCGACAAACCAGACGGCCTGAATGCCTTCGAAGCATTTCAGCCACTTCCTCCTCTCTCGTGCCGAATTCGGCACGGGCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG--TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA----GGAAAAAAAAAAACCCCGGGGGGGGCCCCGGT]
[-] EMBL CA846482 [TCTGTCGGGGCCGCGGCTGCACGACGAGAACATGGCTGTGATGAAATGAGCTGCGGCGTCCACGTCCCCATCGTCTCCTTGATATTCGGAAAAGTAGAGTCTCAGGTGTCTCCCGGAGTGACGGATCTTCTCCTGGAAAAGGTCGGTTTTGTTCATGAGCAGAATCACTGAGGTCCTCCTGAAGATGCCGTTGGCGCAGGTGGAGGCAAAAAGTTCTAAACTCTCCTGGAGTCGATTCACTGGGGAAGCCTCCATTAGCGTCGTGTCGTAGCTGCTGAGAGCCGCGACAAACCAGACGGCCTGAATGCCTTCGAAGCATTTCAGCCACTTCCTCCTCTCTCGTGCCGAATTCGGCACGAGCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA a ]
[+] EMBL FR0057193 [ GCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA NAAAAAAAAAAAA ]
[+] EMBL CA844732 [ TTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCC TCCTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATTCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA AAA ]
[+] EMBL CA844663 [ TCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTCGTACTAAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAA ]
[+] EMBL CA846387 [ GGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA CTAAAA ]
[+] EMBL CA844758 [ GGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTCCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAA ]
[+] EMBL CA844608 [ GGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCATCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTC ]
[+] EMBL CA341074 [ AGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACTCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAA ]
[+] EMBL CA341106 [ AGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAA ]
[+] EMBL FR0057144 [ GCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAGTAGAACGTTGTGAAAGTT AAAA GGAGAACGGAAAACTC ]
[+] EMBL CA844480 [ TCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTC ]
[+] EMBL CA844451 [ TTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGTGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCC ]
[+] EMBL FR0057343 [ CCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA GGAAAAAAA ]
[+] EMBL FR0057267 [ CTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTAAAACA CGAggg ]
[+] EMBL FR0057194 [ TTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA AGAAAAAAAAAAACCCCGGGGGGGGCCCCGGT]
[+] EMBL FR0057426 [ AGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAAGAGGGGAGGAAGAAGAACC ]
consensusID : consensus_2873#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 776 fasta sequence
[TTCCCAGTCTAAACCCCAGTCAGCTTGTGCTTAATGACCCCAGCTGTGGTCCCGCCTACAGCGACGATCGCTACGCTTATTTCGTCTTCACTGCAAACTCCTGTGGGACCAACAGAAAGTTTTTTGCCAACATGATGCTGTATGAAAATGAAATTTCTCTGCCAGGTGAACTTGAGATGGAAAAATCAGACGATGAGCCAGAGTATGAGCTGAAAGTGTACTGCTACTATGACATCAATGACACCTATGCTGTGGCCTTCAACACCAGAGCTCGCAGGAGCGAACCGTATGCAGATGACGCACAAGGAGAGCTTCAAGTTGAAATTCGAGTGGCTTCTGATGACGCCTATGCCGCATTTCACACCGAGGCGGATTATCCTGTCCTCAAGTTCCTGCAGGAGCCGGTGTATTTCGAGGTGGAACTGAAGGGAACCAAACTCGCGGCCGTATCGCTGGAACTGGACAGCTGTTGGGCAACGCTTGACGGCGACAGGTTCTCGCAGCCCAGGTGGAACCTCATCATTAAAGGGTGCGTGAACCCAGTGGACCCAAACAAAGTGATCTTCCATCCTGTCCCTGTTGACCAAAGGGTTCATTATCCTTCACATTTTAAGCGATTTGAGGTCCAGATGTTTGCCTTTGCTGATGAAGATAATTTGAGTCATCAGGTTTTTGTTCACTGCGACGTATTTGTCTGTGATGCCAAAAATCCCCAAGATGGAGTTTGTAATAAGCTCTGTTATGAGAAGGAAACCGGAAAGGGTCAAAAACGTGCT]
[+] EMBL CA844528 [TTCCCAGTCTAAACCCCAGTCAGCTTGTGCTTAATGACCCCAGCTGTGGTCCCGCCTACAGCGACGATCGCTACGCTTATTTCGTCTTCACTGCAAACTCCTGTGGGACCAACAGAAAGTTTTTTGCCAACATGATGCTGTATGAAAATGAAATTTCTCTGCCAGGTGAACTTGAGATGGAAAAATCAGACGATGAGCCAGAGTATGAGCTGAAAGTGTACTGCTACTATGACATCAATGACACCTATGCTGTGGCCTTCAACACCAGAGCTCGCAGGAGCGAACCGTATGCAGATGACGCACAAGGAGAGCTTCAAGTTGAAATTCGAGTGGCTTCTGATGACGCCTATGCCGCATTTCACACCGAGGCGGATTATCCTGTCCTCAAGTTCCTGCAGGAGCCGGTGTATTTCGAGGTGGAACTGAAGGGAACCAAACTCGCGGCCGTATCGCTGGAACTGGACAGCTGTTGGGCAACGCTTGACGGCGACAGGTTCTCGCAGCCCAGGTGGAACCTCATCATTAAAGGGTGCGTGAACCCAGTGGACCCAAACAAAGTGATCTTCCATCCTGTCCCTGTTGACCAAAGGGTTCATTATCCTTCACATTTTAAGCGATTTGAGGTCCAGATGTTTGCCTTTGCTGATGAAGATAATTTGAGTCATCAGGTTTTTGTTCACTGCGACGTATTTGTCTGTGATGCCAAAAATCCCCAAGATGGAGTTTGTAATAAGCTCTGTTATGAGAAGGAAACCGGAAAGGGTCAAAAACGTGCT]
consensusID : consensus_2873#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 484 fasta sequence
[AGCCTGAGGTGTCTGAGAAACAAGCCGGCGCTGAATTTGGGTTAGAGGCAGCCGCTTGTTAAGATGGATCCCCACTGCAAGACCAAATCTCGTGCCGAATTCGGCACGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGTGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGC]
[+] EMBL FR0057113 [AGCCTGAGGTGTCTGAGAAACAAGCCGGCGCTGAATTTGGGTTAGAGGCAGCCGCTTGTTAAGATGGATCCCCACTGCAAGACCAAATCTCGTGCCGAATTCGGCACGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGTGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGC]
consensusID : consensus_2873#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 420 fasta sequence
[GTAGATGACCTGCTGTTTGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG--TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGT]
[+] EMBL FR0057096 [GTAGATGACCTGCTGTTTGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGT]
[+] EMBL CA846445 [ TTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAG ]
[+] EMBL CA846546 [ GATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCCTTCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGTGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGT]
[+] EMBL FR0057216 [ GCTGCTCCTGGGTGTCCCCCTTGTTCTCAGCCTTTAATTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCACATG ]
[+] EMBL FR0057133 [ TGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAA ]
[+] EMBL FR0057351 [ TGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAA ]
[+] EMBL FR0057171 [ TGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAA ]
[+] EMBL CA846469 [ TCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCATCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAG ]
[+] EMBL CA847222 [ TCCTGGGTTTCCTCCTTGTTCTCCTTCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAA ]
[+] EMBL FR0057262 [ CTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAGATGTCAAATAAAACGTTGT ]
[+] EMBL FR0057247 [ CTCCTTGTTC CAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTTGTTGTGATTAAGCTTTTA ]
[+] EMBL FR0057479 [ TTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGTGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGGTTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGA ]
[+] EMBL FR0057480 [ TCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTGCTCCTCTGCTCCTGCACCGGCACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAA ]
[+] EMBL FR0057436 [ CTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGGTGCTCCTCTGCTCCTGCACCGGGACTGAATCTTTTAGGAGCACCCCGACGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAG TCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTT ]
consensusID : consensus_2873#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 413 fasta sequence
[CTCAAATCGCTTAAAATGTGAAGGATAATGAACCCTTTGGTCAACAGGGACAGGATGGAAGATCACTTTGTTTGGGTCCACTGGGTTCACGCACCCTTTAATGATGAGGTTCCACATGGGCTGCGAGAACCTGTCGCCGTCAAGCGTTGCCCAACAGCTGTCCAGTTCCAGCGATACGGCCGCGAGTTTGGTCTCGTGCCGAATTCGGCACGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTCC]
[-] EMBL CA844708 [CTCAAATCGCTTAAAATGTGAAGGATAATGAACCCTTTGGTCAACAGGGACAGGATGGAAGATCACTTTGTTTGGGTCCACTGGGTTCACGCACCCTTTAATGATGAGGTTCCACATGGGCTGCGAGAACCTGTCGCCGTCAAGCGTTGCCCAACAGCTGTCCAGTTCCAGCGATACGGCCGCGAGTTTGGTCTCGTGCCGAATTCGGCACGAGCCACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCAGCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACGGCGCTGCTGGCCATGGCTCC]
consensusID : consensus_2873#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 235 fasta sequence
[AAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTT]
[+] EMBL CA844672 [AAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTGGTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATGTAGTTGTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2873#0 TCTGTCGGGGCCGCGGCTGCACGACGAGAACATGGCTGTGATGAAATGAGCTGCGGCGTC 60
consensus_2873#3 ------------------------------------------------------------
consensus_2873#2 ------------------------------------------------------------
consensus_2873#5 ------------------------------------------------------------
consensus_2873#4 ------------------------------------------------------------
consensus_2873#1 ----------------------------------------------------------TT 2
consensus_2873#0 CACGTCCCCATCGTCTCCTTGATATTCGGAAAAGTAGAGTCTCAGGTGTCTCCCGGAGTG 120
consensus_2873#3 ------------------------------------------------------------
consensus_2873#2 ------------------------------------------------------------
consensus_2873#5 ------------------------------------------------------------
consensus_2873#4 ------------------------------------------------------------
consensus_2873#1 CCCAGTCTAAACCCCAGTCAGCTTGTGCTTAATGACCCCAGCTGTGGTCCCGCCTACAGC 62
consensus_2873#0 ACGGATCTTCTCCTGGAAAAGGTCGGTTTTGTTCATGAGCAGAATCACTGAGGTCCTCCT 180
consensus_2873#3 ------------------------------------------------------------
consensus_2873#2 ------------------------------------------------------------
consensus_2873#5 ------------------------------------------------------------
consensus_2873#4 -------------------------CTCAAATCGCTTAAAATGTGAAGGATAATGAACCC 35
consensus_2873#1 GACGATCGCTACGCTTATTTCGTCTTCACTGCAAACTCCTGTGGGACCAACAGAAAGTTT 122
consensus_2873#0 GAAGATGCCGTTGGCGCAGGTGGAGGCAAAAAGTTCTAAACTCTCCTGGAGTCGATTCAC 240
consensus_2873#3 ------------------------------------------------------------
consensus_2873#2 ------------------------------------------------------------
consensus_2873#5 ------------------------------------------------------------
consensus_2873#4 TTTGGTCAACAGGGACAGGATGGAAGATCACTTTGTTTGGGTCCACTGGGTTCACGCACC 95
consensus_2873#1 TTTGCCAACATGATGCTGTATGAAAATGAAATTTCTCTGCCAGGTGAACTTGAGATGGAA 182
consensus_2873#0 TGGGGAAGCCTCCATTAGCGTCGTGTCGTAGCTGCTGAGAGCCGCGACAAACCAGACGGC 300
consensus_2873#3 ------------------------------------------------------------
consensus_2873#2 ----------AGCCTGAGGTGTCTGAGAAACAAGCCGGCGCTGAATTTGGGTTAGAGGCA 50
consensus_2873#5 ------------------------------------------------------------
consensus_2873#4 CTTTAATGATGAGGTTCCACATGGGCTGCGAGAACCTGTCGCCGTCAAGCGTTGCCCAAC 155
consensus_2873#1 AAATCAGACGATGAGCCAGAGTATGAGCTGAAAGTGTACTGCTACTATGACATCAATGAC 242
consensus_2873#0 CTGAATGCCTTCGAAGCATTTCAGCCACTTCCTCCTCTCTCGTGCCGAATTCGGCACGGG 360
consensus_2873#3 ---------------------------------------GTAGATGACCTGCTGTTTGAG 21
consensus_2873#2 GCCGCTTGTTAAGATGGATCCCCACTGCAAGACCAAATCTCGTGCCGAATTCGGCACGAG 110
consensus_2873#5 ------------------------------------------------------------
consensus_2873#4 AGCTGTCCAGTTCCAGCGATACGGCCGCGAGTTTGG-TCTCGTGCCGAATTCGGCACGAG 214
consensus_2873#1 ACCTATGCTGTGGC--CTTCAACACCAGAGCTCGCAGGAGCGAACCGTATGCAGATGACG 300
consensus_2873#0 C--ACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTG 418
consensus_2873#3 C-CACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTG 80
consensus_2873#2 C-CACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTG 169
consensus_2873#5 ------------------------------------------------------------
consensus_2873#4 C-CACATTCAGGATGAAGAAGCTGCTCCTGGGTTTCCTCCTTGTTCTCAGCCTTTGTTTG 273
consensus_2873#1 CACAAGGAGAGCTTCAAGTTGAAATTCGAGTGGCTTCTGATGACGCCTATGCCGCATTTC 360
consensus_2873#0 GTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCA 478
consensus_2873#3 GTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCA 140
consensus_2873#2 GTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCA 229
consensus_2873#5 ------------------------------------------------------------
consensus_2873#4 GTGCAGGCCCAGAATACCACGGTTCCTGACAACTTGACCATGCTGCCCCACACGCATGCA 333
consensus_2873#1 ACACCGAGGCGGATTATC-CTGTCCTCAAGTTCCTGCAGGAGCCGGTGTATTTCGAGGTG 419
consensus_2873#0 GCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACG 538
consensus_2873#3 GCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACG 200
consensus_2873#2 GCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACG 289
consensus_2873#5 -----------------------------------------AAGAAGCTGCTCCTGGGTT 19
consensus_2873#4 GCTACGGAGAACACAACGGTAGGGGTGACGAATGGCTCCGGTAGGATGGACTGTTGGACG 393
consensus_2873#1 GAACTGAAGGGAACCAAACTCGCGGC--CGTATCGCTGGAACTGGACAG-CTGTTGGGCA 476
* * ** ***
consensus_2873#0 GCGCT-GCTGGCCATGGCTGCTC----CTCTGCTCCTGCACCGGCACTGAATCTTTTAGG 593
consensus_2873#3 GCGCT-GCTGGCCATGGCTGCTC----CTCTGCTCCTGCACCGGCACTGAATCTTTTAGG 255
consensus_2873#2 GTGCT-GCTGGCCATGGCTGCTC----CTCTGCTCCTGCACCGGCACTGAATCTTTTAGG 344
consensus_2873#5 TCCTC-CTTGTTCTCAGCC-TTT----GTTTGGTGCAGGCCCAGAATACCACGGTTCCTG 73
consensus_2873#4 GCGCT-GCTGGCCATGGCTCC--------------------------------------- 413
consensus_2873#1 ACGCTTGACGGCGACAGGTTCTCGCAGCCCAGGTGGAACCTCATCATTAAAGGGTGCGTG 536
* *
consensus_2873#0 AGCACCCCGA---CGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCT 650
consensus_2873#3 AGCACCCCGA---CGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCT 312
consensus_2873#2 AGCACCCCGA---CGCTTCCACTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCT 401
consensus_2873#5 A-CAACTTGA---CCAT---GCTGCCCTACAAACCTGTTTCCAGGTTGCGTCAAGTCTCT 126
consensus_2873#4 ------------------------------------------------------------
consensus_2873#1 AACCCAGTGGACCCAAACAAAGTGATCTTCCATCCTGTCCCT--GTTGACCAAAGGGTTC 594
consensus_2873#0 --GTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATG 708
consensus_2873#3 --GTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATG 370
consensus_2873#2 CTGTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATG 461
consensus_2873#5 --GTAGCACACAAACTTGTTGCTAAGCAGATGCTTGGGTCATTGCTTTGATTGTGAAATG 184
consensus_2873#4 ------------------------------------------------------------
consensus_2873#1 --ATTATCCTTCACATTTTAAGCGATTTGAGGTCCAGATGTTTGCCTTTGCTGATGAAGA 652
consensus_2873#0 TAGTT---GTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTTCCAAAA 765
consensus_2873#3 TAGTT---GTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGT------- 420
consensus_2873#2 TAGTT---GTGATTAAGCTTTTATGC---------------------------------- 484
consensus_2873#5 TAGTT---GTGATTAAGCTTTTATGCAAATGTCAAATAAAACGTTGTGAAAGTT------ 235
consensus_2873#4 ------------------------------------------------------------
consensus_2873#1 TAATTTGAGTCATCAGGTTTTTGTTCAC-TGCGACGTATTTGTCTGTGATGCCAAAAATC 711
consensus_2873#0 GGAAAAAAAAAAACCCCGGGGGGGGCCCCGGT---------------------------- 797
consensus_2873#3 ------------------------------------------------------------
consensus_2873#2 ------------------------------------------------------------
consensus_2873#5 ------------------------------------------------------------
consensus_2873#4 ------------------------------------------------------------
consensus_2873#1 CCCAAGATGGAGTTTGTAATAAGCTCTGTTATGAGAAGGAAACCGGAAAGGGTCAAAAAC 771
consensus_2873#0 -----
consensus_2873#3 -----
consensus_2873#2 -----
consensus_2873#5 -----
consensus_2873#4 -----
consensus_2873#1 GTGCT 776
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |