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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_452#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence
[AAAAATAATTTATTCTCTATAGTTAATGTATCAAGTGATTGTGAAGTTTTCCTTTTATATGGAGTCAACTAGAACGTACAAAAGCATTATTTTCCTTTACATTAATAGCATTATTTTTGGTTTTGCAGGTAAAAAATAAAAAAAATCACATTTCATGTATCTTGCCAGCAGAAATGGGAGGAGCTTGTTTATTGCTTTTGCCCCTTTCAGGGTGTGTTTGCACGGAGTCGTCCTCTCCTCTAGCCCAGGCTGATCTGCCCCCCAAACACGGTGATCATCAGAATGATGGTGAAGCCGCTGAGCATCCCCAGGTTCTGGATCAGGAAGAAGACCATCTTGGAGGAGGCGTGGGCCGGGTCCTGGGCTATGCTGTCCATCTCAGGGAACATGTCTGCCAGGGCAATGTACAGGAACATTCCTCCAGCAATGGCAAAGATCACACCAGGGGGAAAGGTGCTTCCGATCATGATCCCTAAAACCAGGCCGATGTAGCACGACATCGCAGACAGCAGGTTGAAGAAAATGGCCTGTGGGACGCTCATGCCAGCGTTCAGCAGGATCACCAAATCCTCCCAGTTCGTGGGGAAACTCCTCACA]
[+] EMBL CA331932 [AAAAATAATTTATTCTCTATAGTTAATGTATCAAGTGATTGTGAAGTTTTCCTTTTATATGGAGTCAACTAGAACGTACAAAAGCATTATTTTCCTTTACATTAATAGCATTATTTTTGGTTTTGCAGGTAAAAAATAAAAAAAATCACATTTCATGTATCTTGCCAGCAGAAATGGGAGGAGCTTGTTTATTGCTTTTGCCCCTTTCAGGGTGTGTTTGCACGGAGTCGTCCTCTCCTCTAGCCCAGGCTGATCTGCCCCCCAAACACGGTGATCATCAGAATGATGGTGAAGCCGCTGAGCATCCCCAGGTTCTGGATCAGGAAGAAGACCATCTTGGAGGAGGCGTGGGCCGGGTCCTGGGCTATGCTGTCCATCTCAGGGAACATGTCTGCCAGGGCAATGTACAGGAACATTCCTCCAGCAATGGCAAAGATCACACCAGGGGGAAAGGTGCTTCCGATCATGATCCCTAAAACCAGGCCGATGTAGCACGACATCGCAGACAGCAGGTTGAAGAAAATGGCCTGTGGGACGCTCATGCCAGCGTTCAGCAGGATCACCAAATCCTCCCAGTTCGTGGGGAAACTCCTCACA]
consensusID : consensus_452#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 305 fasta sequence
[TGATACATTAACTATAGAGAATAAATTGGTTTTTCAGCCTTTTATTGTGTGAAATACCTCATCGGTGCTTCAGTGGAAACTGGCATAAGATGTGTTTTTATGTGGACAGCAGATTTACGACCTCTGTGACATTCATAAGTGCTGCTTTTAGATTCTACTGTGCCGATTACACCTTTGAGAATCTTCTACTGTCAGATTTAACATCACATTTCTACACAATAAGGCCTTAAATTTGATCGCTTGATGGTTTGTGATCGTGTTGTGAAGCTGGTATCACCAGGGGTCTGACATGTGCCTTGTGTTGT]
[+] EMBL FR0059576 [TGATACATTAACTATAGAGAATAAATTGGTTTTTCAGCCTTTTATTGTGTGAAATACCTCATCGGTGCTTCAGTGGAAACTGGCATAAGATGTGTTTTTATGTGGACAGCAGATTTACGACCTCTGTGACATTCATAAGTGCTGCTTTTAGATTCTACTGTGCCGATTACACCTTTGAGAATCTTCTACTGTCAGATTTAACATCACATTTCTACACAATAAGGCCTTAAATTTGATCGCTTGATGGTTTGTGATCGTGTTGTGAAGCTGGTATCACCAGGGGTCTGACATGTGCCTTGTGTTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_452#0 AAAAATAATTTATTCTCTATAGTTAATGTATCAAGTGATTGTGAAGTTTTCCTTTTATAT 60
consensus_452#1 ---------------------------------------------------------TGA 3
*
consensus_452#0 GGAGTCAACTAGAACGTACAAAAGCATTATTTTCCTTTACATTAATAGCATTATTT--TT 118
consensus_452#1 TACATTAACTATAGAGAATAAATTGGTTTTTCAGCCTTTTATTGTGTGAAATACCTCATC 63
* ***** * * * *** ** ** * ** *** * * ** * *
consensus_452#0 GGTTTTGCAGGTAAAAAATAAAAAAAATCACATTTCATGTATCTTGCCAGCAGAAATGGG 178
consensus_452#1 GGTGCTTCAG-TGGAAACTGGCATAAGATGTGTTTT---TATGTGGACAGCAGATTTACG 119
*** * *** * *** * * ** *** *** * * ******* * *
consensus_452#0 AGGAGCTTGTTTATTGCTTTTGCCCCTTTCAGGGTGTGTTTGCACGGAGTCGTCCTCTCC 238
consensus_452#1 ACCTCTGTGACATTCATAAGTGCTGCTTTTAGATTCTACT-GTGCCGA-TTACACCTTTG 177
* ** * *** **** ** * * * * * ** * * *
consensus_452#0 TCTAGCCCAGGCTGATCTGCCCCCCAAACACGGTGATCATCAGAATGATGGTGAAGCCGC 298
consensus_452#1 AGAATCTTCTACTG-TCAGATTTAACATCACATT--TCTACACAATAAGGCCTTAAAT-T 233
* * *** ** * * *** * ** ** *** * * *
consensus_452#0 TGAGCATCCCCAGGTTCTGGATCAGG--AAGAAGACCATCTTGGAGGAGGCGTGGGCCGG 356
consensus_452#1 TGATCGCTTGATGGTTTGTGATCGTGTTGTGAAGCTGGTATCACCAGGGGTCTGACATGT 293
*** * **** **** * **** * * * ** ** *
consensus_452#0 GTCCTGGGCTATGCTGTCCATCTCAGGGAACATGTCTGCCAGGGCAATGTACAGGAACAT 416
consensus_452#1 GCCTTGTGTTGT------------------------------------------------ 305
* * ** * * *
consensus_452#0 TCCTCCAGCAATGGCAAAGATCACACCAGGGGGAAAGGTGCTTCCGATCATGATCCCTAA 476
consensus_452#1 ------------------------------------------------------------
consensus_452#0 AACCAGGCCGATGTAGCACGACATCGCAGACAGCAGGTTGAAGAAAATGGCCTGTGGGAC 536
consensus_452#1 ------------------------------------------------------------
consensus_452#0 GCTCATGCCAGCGTTCAGCAGGATCACCAAATCCTCCCAGTTCGTGGGGAAACTCCTCAC 596
consensus_452#1 ------------------------------------------------------------
consensus_452#0 A 597
consensus_452#1 -
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |