These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_452#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence [AAAAATAATTTATTCTCTATAGTTAATGTATCAAGTGATTGTGAAGTTTTCCTTTTATATGGAGTCAACTAGAACGTACAAAAGCATTATTTTCCTTTACATTAATAGCATTATTTTTGGTTTTGCAGGTAAAAAATAAAAAAAATCACATTTCATGTATCTTGCCAGCAGAAATGGGAGGAGCTTGTTTATTGCTTTTGCCCCTTTCAGGGTGTGTTTGCACGGAGTCGTCCTCTCCTCTAGCCCAGGCTGATCTGCCCCCCAAACACGGTGATCATCAGAATGATGGTGAAGCCGCTGAGCATCCCCAGGTTCTGGATCAGGAAGAAGACCATCTTGGAGGAGGCGTGGGCCGGGTCCTGGGCTATGCTGTCCATCTCAGGGAACATGTCTGCCAGGGCAATGTACAGGAACATTCCTCCAGCAATGGCAAAGATCACACCAGGGGGAAAGGTGCTTCCGATCATGATCCCTAAAACCAGGCCGATGTAGCACGACATCGCAGACAGCAGGTTGAAGAAAATGGCCTGTGGGACGCTCATGCCAGCGTTCAGCAGGATCACCAAATCCTCCCAGTTCGTGGGGAAACTCCTCACA] [+] EMBL CA331932 [AAAAATAATTTATTCTCTATAGTTAATGTATCAAGTGATTGTGAAGTTTTCCTTTTATATGGAGTCAACTAGAACGTACAAAAGCATTATTTTCCTTTACATTAATAGCATTATTTTTGGTTTTGCAGGTAAAAAATAAAAAAAATCACATTTCATGTATCTTGCCAGCAGAAATGGGAGGAGCTTGTTTATTGCTTTTGCCCCTTTCAGGGTGTGTTTGCACGGAGTCGTCCTCTCCTCTAGCCCAGGCTGATCTGCCCCCCAAACACGGTGATCATCAGAATGATGGTGAAGCCGCTGAGCATCCCCAGGTTCTGGATCAGGAAGAAGACCATCTTGGAGGAGGCGTGGGCCGGGTCCTGGGCTATGCTGTCCATCTCAGGGAACATGTCTGCCAGGGCAATGTACAGGAACATTCCTCCAGCAATGGCAAAGATCACACCAGGGGGAAAGGTGCTTCCGATCATGATCCCTAAAACCAGGCCGATGTAGCACGACATCGCAGACAGCAGGTTGAAGAAAATGGCCTGTGGGACGCTCATGCCAGCGTTCAGCAGGATCACCAAATCCTCCCAGTTCGTGGGGAAACTCCTCACA] consensusID : consensus_452#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 305 fasta sequence [TGATACATTAACTATAGAGAATAAATTGGTTTTTCAGCCTTTTATTGTGTGAAATACCTCATCGGTGCTTCAGTGGAAACTGGCATAAGATGTGTTTTTATGTGGACAGCAGATTTACGACCTCTGTGACATTCATAAGTGCTGCTTTTAGATTCTACTGTGCCGATTACACCTTTGAGAATCTTCTACTGTCAGATTTAACATCACATTTCTACACAATAAGGCCTTAAATTTGATCGCTTGATGGTTTGTGATCGTGTTGTGAAGCTGGTATCACCAGGGGTCTGACATGTGCCTTGTGTTGT] [+] EMBL FR0059576 [TGATACATTAACTATAGAGAATAAATTGGTTTTTCAGCCTTTTATTGTGTGAAATACCTCATCGGTGCTTCAGTGGAAACTGGCATAAGATGTGTTTTTATGTGGACAGCAGATTTACGACCTCTGTGACATTCATAAGTGCTGCTTTTAGATTCTACTGTGCCGATTACACCTTTGAGAATCTTCTACTGTCAGATTTAACATCACATTTCTACACAATAAGGCCTTAAATTTGATCGCTTGATGGTTTGTGATCGTGTTGTGAAGCTGGTATCACCAGGGGTCTGACATGTGCCTTGTGTTGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_452#0 AAAAATAATTTATTCTCTATAGTTAATGTATCAAGTGATTGTGAAGTTTTCCTTTTATAT 60 consensus_452#1 ---------------------------------------------------------TGA 3 * consensus_452#0 GGAGTCAACTAGAACGTACAAAAGCATTATTTTCCTTTACATTAATAGCATTATTT--TT 118 consensus_452#1 TACATTAACTATAGAGAATAAATTGGTTTTTCAGCCTTTTATTGTGTGAAATACCTCATC 63 * ***** * * * *** ** ** * ** *** * * ** * * consensus_452#0 GGTTTTGCAGGTAAAAAATAAAAAAAATCACATTTCATGTATCTTGCCAGCAGAAATGGG 178 consensus_452#1 GGTGCTTCAG-TGGAAACTGGCATAAGATGTGTTTT---TATGTGGACAGCAGATTTACG 119 *** * *** * *** * * ** *** *** * * ******* * * consensus_452#0 AGGAGCTTGTTTATTGCTTTTGCCCCTTTCAGGGTGTGTTTGCACGGAGTCGTCCTCTCC 238 consensus_452#1 ACCTCTGTGACATTCATAAGTGCTGCTTTTAGATTCTACT-GTGCCGA-TTACACCTTTG 177 * ** * *** **** ** * * * * * ** * * * consensus_452#0 TCTAGCCCAGGCTGATCTGCCCCCCAAACACGGTGATCATCAGAATGATGGTGAAGCCGC 298 consensus_452#1 AGAATCTTCTACTG-TCAGATTTAACATCACATT--TCTACACAATAAGGCCTTAAAT-T 233 * * *** ** * * *** * ** ** *** * * * consensus_452#0 TGAGCATCCCCAGGTTCTGGATCAGG--AAGAAGACCATCTTGGAGGAGGCGTGGGCCGG 356 consensus_452#1 TGATCGCTTGATGGTTTGTGATCGTGTTGTGAAGCTGGTATCACCAGGGGTCTGACATGT 293 *** * **** **** * **** * * * ** ** * consensus_452#0 GTCCTGGGCTATGCTGTCCATCTCAGGGAACATGTCTGCCAGGGCAATGTACAGGAACAT 416 consensus_452#1 GCCTTGTGTTGT------------------------------------------------ 305 * * ** * * * consensus_452#0 TCCTCCAGCAATGGCAAAGATCACACCAGGGGGAAAGGTGCTTCCGATCATGATCCCTAA 476 consensus_452#1 ------------------------------------------------------------ consensus_452#0 AACCAGGCCGATGTAGCACGACATCGCAGACAGCAGGTTGAAGAAAATGGCCTGTGGGAC 536 consensus_452#1 ------------------------------------------------------------ consensus_452#0 GCTCATGCCAGCGTTCAGCAGGATCACCAAATCCTCCCAGTTCGTGGGGAAACTCCTCAC 596 consensus_452#1 ------------------------------------------------------------ consensus_452#0 A 597 consensus_452#1 - |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |