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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_490#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 424 fasta sequence
[AACTGGGGGCTCGTCACTGCAAACTCATGCCGGTAAAGAATCCCCCTCGAAGGTGTGGAAACCCCCGTCAGGCCTGTTCTCTTACATCCCCTGTGACGTCAGATGACTCCGCCTTAGAGTTTGGGCTCCAACAGGGAGCCTGGAGATGTGATACCATTGAATCCCTTTGACTGAACATGTTACCATGAAGATTTTACAAGATGGTTTTAAAATCGGATCATTGGCAACATCTGGCGCCACCGTTAACGGACTAAAATAGAAAAAGGAACCCCAAGTGCCATTTAAACTGAGCCCAAATTACAATTTTGTACTGAGACTTCAACTTTATCAGCCAACCAGCAGTTGATTTATCTTTCTTTTTTATTATCTGCTGATGAATTGTTCTTTGGATTAAAGCAATAATGATGAAAAAAAAAAAAAAAAA]
[+] EMBL FR0056151 [AACTGGGGGCTCGTCACTGCAAACTCATGCCGGTAAAGAATCCCCCTCGAAGGTGTGGAAACCCCCGTCAGGCCTGTTCTCTTACATCCCCTGTGACGTCAGATGACTCCGCCTTAGAGTTTGGGCTCCAACAGGGAGCCTGGAGATGTGATACCATTGAATCCCTTTGACTGAACATGTTACCATGAAGATTTTACAAGATGGTTTTAAAATCGGATCATTGGCAACATCTGGCGCCACCGTTAACGGACTAAAATAGAAAAAGGAACCCCAAGTGCCATTTAAACTGAGCCCAAATTACAATTTTGTACTGAGACTTCAACTTTATCAGCCAACCAGCAGTTGATTTATCTTTCTTTTTTATTATCTGCTGATGAATTGTTCTTTGGATTAAAGCAATAATGATGAAAAAAAAAAAAAAAAA]
consensusID : consensus_490#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 417 fasta sequence
[AAAAAAAAAAAAAAAAAACCCCGGGGGGGGCCCGTAAACAATCTTTTTCGCCCCTTTGGGGGGGCCCGTCAGGCCTGTTCTCTTACATCCCCTGTGACGTCAGATGACTCCGCCTTAGAGTTTGGGCTCCAACAGGGAGCCTGGAGATGTGATACCATTGAATCCCTTTGACTGAACATGTTACCATGAAGATTTTACAACATGGTTTTAAAATCGGCTCATTGGCAACATCTGGCGCCACCGTTAACGGACTAAAATAGAAAAAGGAACCCCAAGTGCCATTTAAACTGAGCCCAAATTACAATTTTGTACTGAGACTTCAACTTTATCAGCCAACCAGCAGTTGATTTATCTTTCTTTTTTACTATCTGCTGATGAATTGTTCTTTGGATTAGAGCAATAATGATGAAGACACTC]
[+] EMBL FR0056156 [AAAAAAAAAAAAAAAAAACCCCGGGGGGGGCCCGTAAACAATCTTTTTCGCCCCTTTGGGGGGGCCCGTCAGGCCTGTTCTCTTACATCCCCTGTGACGTCAGATGACTCCGCCTTAGAGTTTGGGCTCCAACAGGGAGCCTGGAGATGTGATACCATTGAATCCCTTTGACTGAACATGTTACCATGAAGATTTTACAACATGGTTTTAAAATCGGCTCATTGGCAACATCTGGCGCCACCGTTAACGGACTAAAATAGAAAAAGGAACCCCAAGTGCCATTTAAACTGAGCCCAAATTACAATTTTGTACTGAGACTTCAACTTTATCAGCCAACCAGCAGTTGATTTATCTTTCTTTTTTACTATCTGCTGATGAATTGTTCTTTGGATTAGAGCAATAATGATGAAGACACTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_490#0 -AACTGGGGGCTCGTCACTGCAAACTCATGCCGGTAAAGAATCCCCCTCGAAGGTGTGGA 59
consensus_490#1 AAAAAAAAAAAAAAAAAACCCCGGGGGGGGCCCGTAAACAATCTTTTTCGCCCCTTTGGG 60
** * * *** ***** **** *** * ***
consensus_490#0 AACCCCCGTCAGGCCTGTTCTCTTACATCCCCTGTGACGTCAGATGACTCCGCCTTAGAG 119
consensus_490#1 GGGGCCCGTCAGGCCTGTTCTCTTACATCCCCTGTGACGTCAGATGACTCCGCCTTAGAG 120
********************************************************
consensus_490#0 TTTGGGCTCCAACAGGGAGCCTGGAGATGTGATACCATTGAATCCCTTTGACTGAACATG 179
consensus_490#1 TTTGGGCTCCAACAGGGAGCCTGGAGATGTGATACCATTGAATCCCTTTGACTGAACATG 180
************************************************************
consensus_490#0 TTACCATGAAGATTTTACAAGATGGTTTTAAAATCGGATCATTGGCAACATCTGGCGCCA 239
consensus_490#1 TTACCATGAAGATTTTACAACATGGTTTTAAAATCGGCTCATTGGCAACATCTGGCGCCA 240
******************** **************** **********************
consensus_490#0 CCGTTAACGGACTAAAATAGAAAAAGGAACCCCAAGTGCCATTTAAACTGAGCCCAAATT 299
consensus_490#1 CCGTTAACGGACTAAAATAGAAAAAGGAACCCCAAGTGCCATTTAAACTGAGCCCAAATT 300
************************************************************
consensus_490#0 ACAATTTTGTACTGAGACTTCAACTTTATCAGCCAACCAGCAGTTGATTTATCTTTCTTT 359
consensus_490#1 ACAATTTTGTACTGAGACTTCAACTTTATCAGCCAACCAGCAGTTGATTTATCTTTCTTT 360
************************************************************
consensus_490#0 TTTATTATCTGCTGATGAATTGTTCTTTGGATTAAAGCAATAATGATGAAAAAAAAAAAA 419
consensus_490#1 TTTACTATCTGCTGATGAATTGTTCTTTGGATTAGAGCAATAATGATGAAGACACTC--- 417
**** ***************************** *************** * *
consensus_490#0 AAAAA 424
consensus_490#1 -----
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |