Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 542 cluster # 542       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_542#0 length = 536 sequences # 2  
consensusID : consensus_542#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 536
fasta sequence 
                              [AAAAAGGGAAAGTGAAATAATGTGTAAAACCTCCTCGGAGCTGGACAGAGTAGTTTGTTTTCTTGTACCAGCAGAAGTGCGCAGTATTCTAATTGTTGGTTCACCCTCTGAGAATAGCCGATATTCTAACTTAATTGGTCTTAGTTTTTACAAAATCTGTTCGTGTACCAGCTGGTTTATTTACCGATTGGTTTTAGGGTAAGAAACAGTTGATTTAAGAACGATTCTAAGAAAAGTCTCGTTTCCGCGGGTAGCAATTAGCTCGTTTTAGCTAACGAAGCGCGCGTTAAAGGAAACAGGTTTCCCGCAGGTGTGGACCCTATGGGCTCGACTGTCCGGTCCTCCACGGTTCTTCTGGACCTTCCAGACTTCACTAATTTGTGCTGCGTCACTCTGACTCTACGGGAGGAGCAGAAGGAGCCGAGGAGCGAACAGATGAAGATCTGCAGAGAGCTGGTGCTGCTCCACACTGATGTGCTGGCCTCAGCAGCTCCGGAGTCCTTCACCGAGATCATCGTGGTCATGGCTGTAGGACA]

[+] EMBL FR0060859            [AAAAAGGGAAAGTGAAATAATGTGTAAAACCTCCTCGGAGCTGGACAGAGTAGTTTGTTTTCTTGTACCAGCAGAAGTGCGCAGTATTCTAATTGTTGGTTCACCCTCTGAGAATAGCCGATATTCTAACTTAATTGGTCTTAGTTTTTACAAAATCTGTTCGTGTACCAGCTGGTTTATTTACCGATTGGTTTTAGGGTAAGAAACAGTTGATTTAAGAACGATTCTAAGAAAAGTCTCGTTTCCGCGGGTAGCAATTAGCTCGTTTTAGCTAACGAAGCGC                                                                                                                                                                                                                                                             ]
[+] EMBL CA332881             [                                                                         GAAGTGCGCAGTATTCTAATTGTTGGTTCACCCTCTGAGAATAGCCGATATTCTAACTTAATTGGTCTTAGTTTTTACAAAATCTGTTCGTGTACCAGCTGGTTTATTTACCGATTGGTTTTAGGGTAAGAAACAGTTGATTTAAGAACGATTCTAAGAAAAGTCTCGTTTCCGCGGTTAGCAATTAGCTCGTTTTAGCTAACGAAGCGCGCGTTAAAGGAAACAGGTTTCCCGCAGGTGTGGACCCTATGGGCTCGACTGTCCGGTCCTCCACGGTTCTTCTGGACCTTCCAGACTTCACTAATTTGTGCTGCGTCACTCTGACTCTACGGGAGGAGCAGAAGGAGCCGAGGAGCGAACAGATGAAGATCTGCAGAGAGCTGGTGCTGCTCCACACTGATGTGCTGGCCTCAGCAGCTCCGGAGTCCTTCACCGAGATCATCGTGGTCATGGCTGTAGGACA]




>consensus_542#0
AAAAAGGGAAAGTGAAATAATGTGTAAAACCTCCTCGGAGCTGGACAGAGTAGTTTGTTT
TCTTGTACCAGCAGAAGTGCGCAGTATTCTAATTGTTGGTTCACCCTCTGAGAATAGCCG
ATATTCTAACTTAATTGGTCTTAGTTTTTACAAAATCTGTTCGTGTACCAGCTGGTTTAT
TTACCGATTGGTTTTAGGGTAAGAAACAGTTGATTTAAGAACGATTCTAAGAAAAGTCTC
GTTTCCGCGGGTAGCAATTAGCTCGTTTTAGCTAACGAAGCGCGCGTTAAAGGAAACAGG
TTTCCCGCAGGTGTGGACCCTATGGGCTCGACTGTCCGGTCCTCCACGGTTCTTCTGGAC
CTTCCAGACTTCACTAATTTGTGCTGCGTCACTCTGACTCTACGGGAGGAGCAGAAGGAG
CCGAGGAGCGAACAGATGAAGATCTGCAGAGAGCTGGTGCTGCTCCACACTGATGTGCTG
GCCTCAGCAGCTCCGGAGTCCTTCACCGAGATCATCGTGGTCATGGCTGTAGGACA

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)