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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_723#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 748 fasta sequence
[GCCCTCATAAGACTTGAATAGAAAAGGGGCAAACTGCTTCCATCCTTCAAGGACTGATGCAGATGGATGTCGGGGAACACTGACCACTAAAAGTCACAGGTTCCTCCTCCCGACCCCCTTGCCCCTGACGCCTTCTGTCACGCTGGCAATGGCAAGAGTCCCGAGTCCCCCCCCCTCTGCGGAAATGTCCAGTGGGCCTGTGGCCGAAAGCTGGTGTTACACACAGATCAAAGTGGTGAAGTTCTCTTATATGTGGACTATCAACAACTTCAGCTTCTGTCGTGAGGAGATGGGAGAAGTAATCAAGAGCTCCACCTTCTCCTCTGGGGCCAACGACAAGCTAAAGTGGTGTTTGCGAGTGAATCCTAAAGGTCTGGATGAGGAGAGTAAAGACTACCTGTCTCTCTACCTGCTGCTGGTCAGCTGTCCAAAGGCAGAGGTGCGTGCCAAGTTCAAGTTCTCCATCCTCAATGCCAAGGGAGAGGAGACCAAAGCCATGGAAAGCCAGAGAGCTTATCGTTTTGTTCAGGGAAAAGACTGGGGCTTCAAAAAGTTCATCCGGAGAGACTTCCTCCTAGAAGAGGCCAATGGCCTCCTACCTGATGATAAGCTAACGCTTTTTTGTGAGGTAAGTGTGGTGCAGGATTCTGTTAACATATCCGGACAGAACACCATGAATATGGTGAAGGTGCCCGACTGCCGGCTAACAAATGAGCTGGGAGGCCTGTGGGAGAACTCTCGCTTCACC]
[+] EMBL CA588608 [GCCCTCATAAGACTTGAATAGAAAAGGGGCAAACTGCTTCCATCCTTCAAGGACTGATGCAGATGGATGTCGGGGAACACTGACCACTAAAAGTCACAGGTTCCTCCTCCCGACCCCCTTGCCCCTGACGCCTTCTGTCACGCTGGCAATGGCAAGAGTCCCGAGTCCCCCCCCCTCTGCGGAAATGTCCAGTGGGCCTGTGGCCGAAAGCTGGTGTTACACACAGATCAAAGTGGTGAAGTTCTCTTATATGTGGACTATCAACAACTTCAGCTTCTGTCGTGAGGAGATGGGAGAAGTAATCAAGAGCTCCACCTTCTCCTCTGGGGCCAACGACAAGCTAAAGTGGTGTTTGCGAGTGAATCCTAAAGGTCTGGATGAGGAGAGTAAAGACTACCTGTCTCTCTACCTGCTGCTGGTCAGCTGTCCAAAGGCAGAGGTGCGTGCCAAGTTCAAGTTCTCCATCCTCAATGCCAAGGGAGAGGAGACCAAAGCCATGGAAAGCCAGAGAGCTTATCGTTTTGTTCAGGGAAAAGACTGGGGCTTCAAAAAGTTCATCCGGAGAGACTTCCTCCTAGAAGAGGCCAATGGCCTCCTACCTGATGATAAGCTAACGCTTTTTTGTGAGGTAAGTGTGGTGCAGGATTCTGTTAACATATCCGGACAGAACACCATGAATATGGTGAAGGTGCCCGACTGCCGGCTAACAAATGAGCTGGGAGGCCTGTGGGAGAACTCTCGCTTCACC]
consensusID : consensus_723#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 152 fasta sequence
[AACTATTGGGGGGCGAACTGCTTCCATTCAGCGGGGCCTGATACAGATGCATATCCCCCCACACTCACCACTAAAAGTCACAGGGTCCTCCTCCCGACCCCCTTGCCCCTGACGCCTTCTGTCACGCTGTCAATGACAATAGTTCCGACGCC]
[+] EMBL FR0060589 [AACTATTGGGGGGCGAACTGCTTCCATTCAGCGGGGCCTGATACAGATGCATATCCCCCCACACTCACCACTAAAAGTCACAGGGTCCTCCTCCCGACCCCCTTGCCCCTGACGCCTTCTGTCACGCTGTCAATGACAATAGTTCCGACGCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_723#0 GCCCTCATAAGACTTGAATAGAAAAGGGGCAAACTGCTTCCATCCTTCAAGGACTGATGC 60
consensus_723#1 ----------------AACTATTGGGGGGCGAACTGCTTCCATTCAGCGGGGCCTGATAC 44
** ***** ************ * * ** ***** *
consensus_723#0 AGATGGATGTCGGGGAACACTGACCACTAAAAGTCACAGGTTCCTCCTCCCGACCCCCTT 120
consensus_723#1 AGATGCATATCCCCCCACACTCACCACTAAAAGTCACAGGGTCCTCCTCCCGACCCCCTT 104
***** ** ** ***** ****************** *******************
consensus_723#0 GCCCCTGACGCCTTCTGTCACGCTGGCAATGGCAAGAGTCCCGAGTCCCCCCCCCTCTGC 180
consensus_723#1 GCCCCTGACGCCTTCTGTCACGCTGTCAATGACAATAGTTCCGACGCC------------ 152
************************* ***** *** *** **** **
consensus_723#0 GGAAATGTCCAGTGGGCCTGTGGCCGAAAGCTGGTGTTACACACAGATCAAAGTGGTGAA 240
consensus_723#1 ------------------------------------------------------------
consensus_723#0 GTTCTCTTATATGTGGACTATCAACAACTTCAGCTTCTGTCGTGAGGAGATGGGAGAAGT 300
consensus_723#1 ------------------------------------------------------------
consensus_723#0 AATCAAGAGCTCCACCTTCTCCTCTGGGGCCAACGACAAGCTAAAGTGGTGTTTGCGAGT 360
consensus_723#1 ------------------------------------------------------------
consensus_723#0 GAATCCTAAAGGTCTGGATGAGGAGAGTAAAGACTACCTGTCTCTCTACCTGCTGCTGGT 420
consensus_723#1 ------------------------------------------------------------
consensus_723#0 CAGCTGTCCAAAGGCAGAGGTGCGTGCCAAGTTCAAGTTCTCCATCCTCAATGCCAAGGG 480
consensus_723#1 ------------------------------------------------------------
consensus_723#0 AGAGGAGACCAAAGCCATGGAAAGCCAGAGAGCTTATCGTTTTGTTCAGGGAAAAGACTG 540
consensus_723#1 ------------------------------------------------------------
consensus_723#0 GGGCTTCAAAAAGTTCATCCGGAGAGACTTCCTCCTAGAAGAGGCCAATGGCCTCCTACC 600
consensus_723#1 ------------------------------------------------------------
consensus_723#0 TGATGATAAGCTAACGCTTTTTTGTGAGGTAAGTGTGGTGCAGGATTCTGTTAACATATC 660
consensus_723#1 ------------------------------------------------------------
consensus_723#0 CGGACAGAACACCATGAATATGGTGAAGGTGCCCGACTGCCGGCTAACAAATGAGCTGGG 720
consensus_723#1 ------------------------------------------------------------
consensus_723#0 AGGCCTGTGGGAGAACTCTCGCTTCACC 748
consensus_723#1 ----------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |