These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_767#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence [CAAGAAGAGAGTGCAGTTGTACTACCAGCAGATACAGGAGAGGTCTCCTCTCAGCGAGCAGGAGATGAACGCTCACCTTGCCGAGGAGTCACGGAAATACAGAAATGAATTCAACACCAACCTGGCCTTGACGGAAATCTACAAATATGCCAAAAGATACAGAAACCAGGTGGTGAGTGCTCTGGAGTCAAACCCCACTGCACGGCGCACTCAGCTGCACCACAAGTTCGAGCAGGTCATTGCTCTTGTGGAGGACAACATCTACGAGTGCTGCAGCGAGGCCTGAACCAGCCGGCGTGTTTCTTTTCCTCCCACCAGTCATTTCTTTCTCCTGCTGACAGCTGCCTTTTTCTCAACAAAAGCTATTTGGGAATGATGCCCACTGAAGCAAAAGCCTTTCCTAAAGCGTTGTTATTGTTGAGAAGGCGTGAAAAGTGGAAGGGCAAAGGACTTAAACCTCTAAAGCACCATT] [+] EMBL FR0057776 [CAAGAAGAGAGTGCAGTTGTACTACCAGCAGATACAGGAGAGGTCTCCTCTCAGCGAGCAGGAGATGAACGCTCACCTTGCCGAGGAGTCACGGAAATACAGAAATGAATTCAACACCAACCTGGCCTTGACGGAAATCTACAAATATGCCAAAAGATACAGAAACCAGGTGGTGAGTGCTCTGGAGTCAAACCCCACTGCACGGCGCACTCAGCTGCACCACAAGTTCGAGCAGGTCATTGCTCTTGTGGAGGACAACATCTACGAGTGCTGCAGCGAGGCCTGAACCAGCCGGCGTGTTTCTTTTCCTCCCACCAGTCATTTCTTTCTCCTGCTGACAGCTGCCTTTTTCTCAACAAAAGCTATTTGGGAATGATGCCCACTGAAGCAAAAGCCTTTCCTAAAGCGTTGTTATTGTTGAGAAGGCGTGAAAAGTGGAAGGGCAAAGGACTTAAACCTCTAAAGCACCATT] consensusID : consensus_767#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 427 fasta sequence [TAGACCCCCTTCGGTACCAGAATTTCAATTCCGTGAGCTGGCAGAGTATGATGCACACACGTTCTGAACACTTTACTCACCCGTGACTCCTCGGCAAGGTGAGCGTTCATCTCCTGCTCGCTGAGAGGAGACATTTCCTGTATCTGCTGGTAGTACAACTGCACTCTCTTCTTGTACTCGGGGATCTCCTTAGCATAAAGCAGCTTGTTTGTCGGGGAGTCCTGGAACATGGATTTAAAGAATGCTTTCAACAAAGTTGAAACCCAAGATCAGACGATCCGCGAGTGTTTCCATTCAATGCTAATCATTTTCATCAGACCTTTTGATTGTAACATCCGGCTTATCTCCCGCTGGACCATTCTATCCTGCCTTTTTTTTTTTGCATCTATAGAGGGACCAGCTTGAGTAAAACTCTCTCATTGCGTTG] [+] EMBL CA589257 [TAGACCCCCTTCGGTACCAGAATTTCAATTCCGTGAGCTGGCAGAGTATGATGCACACACGTTCTGAACACTTTACTCACCCGTGACTCCTCGGCAAGGTGAGCGTTCATCTCCTGCTCGCTGAGAGGAGACATTTCCTGTATCTGCTGGTAGTACAACTGCACTCTCTTCTTGTACTCGGGGATCTCCTTAGCATAAAGCAGCTTGTTTGTCGGGGAGTCCTGGAACATGGATTTAAAGAATGCTTTCAACAAAGTTGAAACCCAAGATCAGACGATCCGCGAGTGTTTCCATTCAATGCTAATCATTTTCATCAGACCTTTTGATTGTAACATCCGGCTTATCTCCCGCTGGACCATTCTATCCTGCCTTTTTTTTTTTGCATCTATAGAGGGACCAGCTTGAGTAAAACTCTCTCATTGCGTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_767#0 CAAGAAGAGAGTGCAGTTG-TACTACCAG--CAGATACAGGAGA-GGTCTCCTCTCA-GC 55 consensus_767#1 ------TAGACCCCCTTCGGTACCAGAATTTCAATTCCGTGAGCTGGCAGAGTATGATGC 54 *** * * * *** * * ** * * *** ** * * * ** consensus_767#0 GAGCAGGAGATGAACGCTCACCTTGCCGAGGAGTCACGGAAATACAGAAATGAATTCAAC 115 consensus_767#1 ACACACGTTCTGAACACTTTACTCACCCGTGACTCCTCGGCA---AGGTGAGCGTTCATC 111 ** * ***** ** ** ** ** ** * * ** * **** * consensus_767#0 ACCAACCTGGCCTTGACGGAAATCTACAA-ATATGCCAAAAGATACAGAAACCAGGTGGT 174 consensus_767#1 TCCTGCTCGCTGAGAGGAGACATTTCCTGTATCTGCTGGTAG-TACA-ACTGCACTCTCT 169 ** * * ** ** * * ** *** ** **** * ** * consensus_767#0 GAGTGCTCTGGAGTCAAACCCCACTGCACGGCGCACTCAGCTGCACCACAAGTTCGAGCA 234 consensus_767#1 TCTTGTACTCGGG--GATCTCCTTAGCATAAAGCAGCTTGTTTGTCGGGGAGTCC---TG 224 ** ** * * * * ** *** *** * * * *** * consensus_767#0 GGTCATTGCTCTTGTGGAGGACAACATCTACGAGTGCTGCAGCGAGGCCTGAACCAGCCG 294 consensus_767#1 GAACATGGATTT---AAAGAATGCTTTCAACAAA-GTTGAAACCCAAGATCAGACGATCC 280 * *** * * * ** * ** ** * * ** * * * * * * consensus_767#0 GCGTGTTTCTTTTCCTCCCACCAGTCATTTCTTTCTCCTGCTGACAGCTGCCTTTTTCTC 354 consensus_767#1 GCGAGTGTTTCCATTCAATGCTAATCATTTT-------------CATCAGACCTTTTGAT 327 *** ** * * * * ****** ** * * * **** consensus_767#0 AACAAAAGCTATTTGGGAATGATGCCCACTGAAGCAAAAGCCTTTCCTAAAGCGTTGTTA 414 consensus_767#1 TGTAACATCCGGCT-----TATCTCCCGCTGGACCAT---TCTATCCTGCCTTTTTTTTT 379 ** * * * * *** *** * ** ** **** ** ** consensus_767#0 TTGTTGAGAAGGCGTGAAAAGTGGAAGGGCAAAGGACTTAAACCTCTAAAGCACCATT 472 consensus_767#1 TTGCATCTATAGAGGGACCAGCTTGAGTAAAACTCTCTCATTGCGTTG---------- 427 *** * * * ** ** ** ** ** * * * |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |