These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_797#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence [AGGTTAAACAGGCAGGGAGAACTAGGTGGATGAGAAAATAGCTGGAGGGGAAGGTTTACGCTCACTCCACCGAAGATTAGTCTCACCAGTGAACTCCTTCAGTGTACAGGCTTTCTCTTTCTCCTCTTGTGGTGACCGGCCACGGGAATGGGAATGGACAGGATTCTGTGGACAGTCCTTGTGCTGCTGCAAGGGCTGGCACCTTCTGAGGCTCTGAGAGAGGAATGGCAGCCAGCAGACTATTTAGACTCTTTGGAACAAGCAAAGCAGTTCCTTGCTGACTACAACAGCACTGCAGAGGAGGTACTTTTCTTTTCCCAGTCTGCCTCCTGGAACTACAACACCAACATTACAGACTACAACTCCAAGCTTCAGGTAAATGCGTCTCTGGAAGAACAGGCCTTTACGGCAGCATGGGGGTCAAAAGCCAAGACAACTTTCGTAAAAGCTTT] [+] EMBL CA589591 [AGGTTAAACAGGCAGGGAGAACTAGGTGGATGAGAAAATAGCTGGAGGGGAAGGTTTACGCTCACTCCACCGAAGATTAGTCTCACCAGTGAACTCCTTCAGTGTACAGGCTTTCTCTTTCTCCTCTTGTGGTGACCGGCCACGGGAATGGGAATGGACAGGATTCTGTGGACAGTCCTTGTGCTGCTGCAAGGGCTGGCACCTTCTGAGGCTCTGAGAGAGGAATGGCAGCCAGCAGACTATTTAGACTCTTTGGAACAAGCAAAGCAGTTCCTTGCTGACTACAACAGCACTGCAGAGGAGGTACTTTTCTTTTCCCAGTCTGCCTCCTGGAACTACAACACCAACATTACAGACTACAACTCCAAGCTTCAGGTAAATGCGTCTCTGGAAGAACAGGCCTTTACGGCAGCATGGGGGTCAAAAGCCAAGACAACTTTCGTAAAAGCTTT] consensusID : consensus_797#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 266 fasta sequence [TATCTATATCTTATCTAGCATCGCTCTGAGTAAGGGGGGCGTGGATATTATGATGGAAAATTGCCATCCGCCTTCTGACAGGGTGGTAAAATAAAGGTAGGGGAAGAGATATTGAGGAGGAGACCTGGGGGGTGGACATGTCTATCGCTGTTATGTGTGGGCAGGTTTAAACTGACACTTTAAAAGAGACTTGAATTGACTTTTCTTCATTCATCAGAAAGGCAGGCAGGTTAAACAGGCAGGGAGAACTATGTGTATTAGAAAAT] [+] EMBL FR0059384 [TATCTATATCTTATCTAGCATCGCTCTGAGTAAGGGGGGCGTGGATATTATGATGGAAAATTGCCATCCGCCTTCTGACAGGGTGGTAAAATAAAGGTAGGGGAAGAGATATTGAGGAGGAGACCTGGGGGGTGGACATGTCTATCGCTGTTATGTGTGGGCAGGTTTAAACTGACACTTTAAAAGAGACTTGAATTGACTTTTCTTCATTCATCAGAAAGGCAGGCAGGTTAAACAGGCAGGGAGAACTATGTGTATTAGAAAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_797#0 AGGTTAAACAGGCAGGGAGAACTAGGTGGATGAGAAAATAGCTGGAGGGGAAGGTTTACG 60 consensus_797#1 ------------------------------------------------------------ consensus_797#0 CTCACTCCACCGAAGATTAGTCTCACCAGTGAACTCCTTCAGTGTACAGGCTTTCTCTTT 120 consensus_797#1 ---------------------------------------------------TATCTATAT 9 * *** * * consensus_797#0 CTCCTCTTGTGGTGACCGGCCACGGGAATGGGAATGGACAGGATTCTGTGGACAGTCCTT 180 consensus_797#1 CTTATCTAGCATCGCTCTG--AGTAAGGGGGGCGTGGATATTATGATGGAAAATTGCCAT 67 ** *** * * * * * *** **** * ** ** * ** * consensus_797#0 GTGCTGCTGCAAGGGCTGGCACCTTCTGAGGCTCTGAGAGAGGAATGGCAGCCAGCAGAC 240 consensus_797#1 CCGCCTTCTGACAGGGTGGTAAAATA-AAGGTAGGGGAAGAGATATTGAGG--AGGAGAC 124 ** * ** *** * * *** * **** ** * * ** **** consensus_797#0 TATTTAGACTCTTTGGAACAAGCAAAGCAGTTCCTTGCTGACTACAA--CAGCACTGCAG 298 consensus_797#1 C-TGGGGGGTGGACATGTCTATCGCTGTTATGTGTGGGCAGGTTTAAACTGACACTTTAA 183 * * * * * * * * * * * ** **** * consensus_797#0 AGGAGGT---ACTTTTCTTTTCCCAGTCTGCCTCCTGGAACTACAACACCAACATTACAG 355 consensus_797#1 AAGAGACTTGAATTGACTTTTCTTCATTCATCAGAAAGGCAGGCAGGTTAAACAG-GCAG 242 * *** * ** ****** * * * ** **** *** consensus_797#0 ACTACAACTCCAAGCTTCAGGTAAATGCGTCTCTGGAAGAACAGGCCTTTACGGCAGCAT 415 consensus_797#1 GG-AGAACTATGTGTATTAGA-AAAT---------------------------------- 266 * **** * * ** **** consensus_797#0 GGGGGTCAAAAGCCAAGACAACTTTCGTAAAAGCTTT 452 consensus_797#1 ------------------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |