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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_849#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 626 fasta sequence
[TTACTATGGCTCCAGCGAAGGAAAATGGTGGACTTGACAATCTCGCTTTTGATATGGACGAAGACATAAAAGACGGGCTCAAAGAAATGAGGGAAAAGCCGTCAGCATTACCTGACATCGTTTGGGGCCATCTTCTCCATCCCCCTCATTCTCTCAGAGAGCCTGTGTCTCCAGCATGACAGCCTGAGCCAGAGTCGCCTCATCAACACTATTTTCTTTGTTTCTGGGATTTGCACCATGCTGCAGGTCACCTTTGGAGTCAGGCTTCCTATCCTACAGGGGGGTACATTTTCTTTGCTGACCCCCGCTATGGCAATGTTGTCCATGCCAGAGTGGGAGTGTCCTGCTTGGACTTACAATGCCAGTTTGGTTAACGTCTCATCACCAGTCTTTATAGAAGTGTGGCAGAGCCGGATGAGAACTCTGCAGGGCTCCATCATGGTGGCTTCGCTCCTCCAGATCGTGGCCGGCTTCTCGGGCATGATCGGCTTTCTCATGCGCTTCATAGGACCTTTGACCATTGCTCCCACAATCACCCTCATTGGTCTGTCGGTTTATCAAACAGCCGGAGCCAAAGCTGGGAGCCACTGGGGCATCTCTGCCATGACCACTGCGCTGATCATCCT]
[+] EMBL CA590160 [TTACTATGGCTCCAGCGAAGGAAAATGGTGGACTTGACAATCTCGCTTTTGATATGGACGAAGACATAAAAGACGGGCTCAAAGAAATGAGGGAAAAGCCGTCAGCATTACCTGACATCGTTTGGGGCCATCTTCTCCATCCCCCTCATTCTCTCAGAGAGCCTGTGTCTCCAGCATGACAGCCTGAGCCAGAGTCGCCTCATCAACACTATTTTCTTTGTTTCTGGGATTTGCACCATGCTGCAGGTCACCTTTGGAGTCAGGCTTCCTATCCTACAGGGGGGTACATTTTCTTTGCTGACCCCCGCTATGGCAATGTTGTCCATGCCAGAGTGGGAGTGTCCTGCTTGGACTTACAATGCCAGTTTGGTTAACGTCTCATCACCAGTCTTTATAGAAGTGTGGCAGAGCCGGATGAGAACTCTGCAGGGCTCCATCATGGTGGCTTCGCTCCTCCAGATCGTGGCCGGCTTCTCGGGCATGATCGGCTTTCTCATGCGCTTCATAGGACCTTTGACCATTGCTCCCACAATCACCCTCATTGGTCTGTCGGTTTATCAAACAGCCGGAGCCAAAGCTGGGAGCCACTGGGGCATCTCTGCCATGACCACTGCGCTGATCATCCT]
consensusID : consensus_849#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 364 fasta sequence
[CGTTCTCAAAGAAATGAGGGAAAAGCCGTCAGGTGAGGACAAAAGCAAACTGGCCTACTGTGTGACAGACACCCCTCCGTGGTACCTTTGCATTGCTTTGTCCATTCAGCATTACCTGACATCGTTTGGGGCCATCTTCTCCATCCCCCTCATTCTCTCAGAGAGCCTGTGTCTCCAGCATGACAGCCTGAGCCAGAGTCGCCTCATCAACACTATTTTCTTTGTTTCTGGGATTTGCACCATGCTGCAGGTCACCTTTNGAGNCAGGCTTTCTATCCTACANNNNNNNACATTTTCTTTGCTNACCCCCGCTATGGCAATGTTGTCCATGCCAGAGGGACAATTTCCTGCTTGGCTTTACAAT]
[+] EMBL FR0059624 [CGTTCTCAAAGAAATGAGGGAAAAGCCGTCAGGTGAGGACAAAAGCAAACTGGCCTACTGTGTGACAGACACCCCTCCGTGGTACCTTTGCATTGCTTTGTCCATTCAGCATTACCTGACATCGTTTGGGGCCATCTTCTCCATCCCCCTCATTCTCTCAGAGAGCCTGTGTCTCCAGCATGACAGCCTGAGCCAGAGTCGCCTCATCAACACTATTTTCTTTGTTTCTGGGATTTGCACCATGCTGCAGGTCACCTTTNGAGNCAGGCTTTCTATCCTACANNNNNNNACATTTTCTTTGCTNACCCCCGCTATGGCAATGTTGTCCATGCCAGAGGGACAATTTCCTGCTTGGCTTTACAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_849#0 ---TTACTATGGCTCCAGCGAAGGA-----AAATGGTGGACTTGACAATCTCGCTTTTGA 52
consensus_849#1 CGTTCTCAAAGAAATGAGGGAAAAGCCGTCAGGTGAGGACAAAAGCAAACTGGCCTACTG 60
* * * * ** *** * ** * *** ** ** *
consensus_849#0 TATGGACGAAGACATAAAAGACGGGCTCAAAGAAATGAGGGAAAAGCCGTCAGCATTACC 112
consensus_849#1 TGTG-ACAGACACCCCTCCG-TGGTACCTTTGCATTGCTTTGT--CCATTCAGCATTACC 116
* ** ** * ** * ** * * * ** * ***********
consensus_849#0 TGACATCGTTTGGGGCCATCTTCTCCATCCCCCTCATTCTCTCAGAGAGCCTGTGTCTCC 172
consensus_849#1 TGACATCGTTTGGGGCCATCTTCTCCATCCCCCTCATTCTCTCAGAGAGCCTGTGTCTCC 176
************************************************************
consensus_849#0 AGCATGACAGCCTGAGCCAGAGTCGCCTCATCAACACTATTTTCTTTGTTTCTGGGATTT 232
consensus_849#1 AGCATGACAGCCTGAGCCAGAGTCGCCTCATCAACACTATTTTCTTTGTTTCTGGGATTT 236
************************************************************
consensus_849#0 GCACCATGCTGCAGGTCACCTTTGGAGTCAGGCTTCCTATCCTACAGGGGGGTACATTTT 292
consensus_849#1 GCACCATGCTGCAGGTCACCTTTNGAGNCAGGCTTTCTATCCTACANNNNNNNACATTTT 296
*********************** *** ******* ********** *******
consensus_849#0 CTTTGCTGACCCCCGCTATGGCAATGTTGTCCATGCCAGAGTGGGAGTGTCCTGCTTGGA 352
consensus_849#1 CTTTGCTNACCCCCGCTATGGCAATGTTGTCCATGCCAGAGGGACAATTTCCTGCTTGGC 356
******* ********************************* * * * **********
consensus_849#0 CTTACAATGCCAGTTTGGTTAACGTCTCATCACCAGTCTTTATAGAAGTGTGGCAGAGCC 412
consensus_849#1 TTTACAAT---------------------------------------------------- 364
*******
consensus_849#0 GGATGAGAACTCTGCAGGGCTCCATCATGGTGGCTTCGCTCCTCCAGATCGTGGCCGGCT 472
consensus_849#1 ------------------------------------------------------------
consensus_849#0 TCTCGGGCATGATCGGCTTTCTCATGCGCTTCATAGGACCTTTGACCATTGCTCCCACAA 532
consensus_849#1 ------------------------------------------------------------
consensus_849#0 TCACCCTCATTGGTCTGTCGGTTTATCAAACAGCCGGAGCCAAAGCTGGGAGCCACTGGG 592
consensus_849#1 ------------------------------------------------------------
consensus_849#0 GCATCTCTGCCATGACCACTGCGCTGATCATCCT 626
consensus_849#1 ----------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |