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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_911#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 630 fasta sequence
[CACCCCGTCACCTGGGAACACCACCACCCCNGTTTCCTGGGCAACACCACCAGCCCGTCACCTGGGAACACCACCACCCCGTCACCTGGGAACACCACCAGCCCGTCACCTGGGAACACCACCACCCAATCACCTGGGAACACCACCAGTCCGTCACCTGGGAACACCACCACCCCGTCACCTGGGAACAACACCAGCCCACCACCTGGGAACACCACCAGCCCGTCACCTGGGAACACCACCAGCCCATCACCTGGGAACACCACCACCCCATCACCTGGGAACACCACCAGCCCATCACCTGGAAACACCACCAGCCCATCACCTGGAAACACCACCAGCCCATCACCTGGAAACACCACCAGCCCATCACCTGGGAACACCACCACCCCATCACCTGGGAACACCACCCCCCCAACAACTGGAACTACCACCACCACTCCGCCTCCAAATCCTTGTTCCTCCCAACCCTGTGGTCGTGGAGCCACCTGTGAAAACCGTAGGGGGGAAGACTTTGTATGTCTGTGTTTACCCGGCGATTTCTACAATAACAATACCAATAGTTGTGAGGCAGCCCAAGTTTTCCCCGCAGAACTGGAAGTTCAGAATTTACCTTTCCATGAAACGCTC]
[+] EMBL CA845067 [CACCCCGTCACCTGGGAACACCACCACCCCNGTTTCCTGGGCAACACCACCAGCCCGTCACCTGGGAACACCACCACCCCGTCACCTGGGAACACCACCAGCCCGTCACCTGGGAACACCACCACCCAATCACCTGGGAACACCACCAGTCCGTCACCTGGGAACACCACCACCCCGTCACCTGGGAACAACACCAGCCCACCACCTGGGAACACCACCAGCCCGTCACCTGGGAACACCACCAGCCCATCACCTGGGAACACCACCACCCCATCACCTGGGAACACCACCAGCCCATCACCTGGAAACACCACCAGCCCATCACCTGGAAACACCACCAGCCCATCACCTGGAAACACCACCAGCCCATCACCTGGGAACACCACCACCCCATCACCTGGGAACACCACCCCCCCAACAACTGGAACTACCACCACCACTCCGCCTCCAAATCCTTGTTCCTCCCAACCCTGTGGTCGTGGAGCCACCTGTGAAAACCGTAGGGGGGAAGACTTTGTATGTCTGTGTTTACCCGGCGATTTCTACAATAACAATACCAATAGTTGTGAGGCAGCCCAAGTTTTCCCCGCAGAACTGGAAGTTCAGAATTTACCTTTCCATGAAACGCTC]
consensusID : consensus_911#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 270 fasta sequence
[CCGGACGTTTCTGCGATGGCTCAAGCCTTCAGATTTCTCCTGGCTCTTTTGCTTCTCTTTGCCTGTTCTGGCGGAACTACTGTTCAGTCATCAAATGTAACTACCACCACCCCGTCACCTGGGAACACCACCACCCCGTCACCTGGGAACACCACCACCCCGTCACCTGGGAACACCACCAGCCCATCACCTGGGAACACCACCACCCCGTCACCTGGGAACACCACCAGCCCATCACCTGGGAACATCATTACCCCGTCACCTGGGAAC]
[+] EMBL CA591026 [CCGGACGTTTCTGCGATGGCTCAAGCCTTCAGATTTCTCCTGGCTCTTTTGCTTCTCTTTGCCTGTTCTGGCGGAACTACTGTTCAGTCATCAAATGTAACTACCACCACCCCGTCACCTGGGAACACCACCACCCCGTCACCTGGGAACACCACCACCCCGTCACCTGGGAACACCACCAGCCCATCACCTGGGAACACCACCACCCCGTCACCTGGGAACACCACCAGCCCATCACCTGGGAACATCATTACCCCGTCACCTGGGAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_911#0 CACCCCGTCACCTGGGAACACCACCACCCCNGTTTCCTGGGCAACACCACCAGCCCGTCA 60
consensus_911#1 -------------CCGGACGTTTCTGCGATGGCT--CAAGCCTTCAGATTTCTCCTGGCT 45
* ** * * * * * * * ** ** * *
consensus_911#0 CCTGGGAACACCACCACCCCGTCACCTGGGAACACCACCAGCCCGTCACCTGGGAACACC 120
consensus_911#1 CTTTTGCTTCTCTTTGCCTGTTCTGGCGGAACTACTGTTCAGTCATCAAATGTAACTACC 105
* * * * ** ** ** * ** * *** ** * ***
consensus_911#0 ACCACCCAATCACCTGGGAACACCACCAGTCCGTCACCTGGGAACACCACCACCCCGTCA 180
consensus_911#1 ACCACCCCGTCACCTGGGAACACCACCACCCCGTCACCTGGGAACACCACCACCCCGTCA 165
******* ******************* ******************************
consensus_911#0 CCTGGGAACAACACCAGCCCACCACCTGGGAACACCACCAGCCCGTCACCTGGGAACACC 240
consensus_911#1 CCTGGGAACACCACCAGCCCATCACCTGGGAACACCACCACCCCGTCACCTGGGAACACC 225
********** ********** ****************** *******************
consensus_911#0 ACCAGCCCATCACCTGGGAACACCACCACCCCATCACCTGGGAACACCACCAGCCCATCA 300
consensus_911#1 ACCAGCCCATCACCTGGGAACATCATTACCCCGTCACCTGGGAAC--------------- 270
********************** ** ***** ************
consensus_911#0 CCTGGAAACACCACCAGCCCATCACCTGGAAACACCACCAGCCCATCACCTGGAAACACC 360
consensus_911#1 ------------------------------------------------------------
consensus_911#0 ACCAGCCCATCACCTGGGAACACCACCACCCCATCACCTGGGAACACCACCCCCCCAACA 420
consensus_911#1 ------------------------------------------------------------
consensus_911#0 ACTGGAACTACCACCACCACTCCGCCTCCAAATCCTTGTTCCTCCCAACCCTGTGGTCGT 480
consensus_911#1 ------------------------------------------------------------
consensus_911#0 GGAGCCACCTGTGAAAACCGTAGGGGGGAAGACTTTGTATGTCTGTGTTTACCCGGCGAT 540
consensus_911#1 ------------------------------------------------------------
consensus_911#0 TTCTACAATAACAATACCAATAGTTGTGAGGCAGCCCAAGTTTTCCCCGCAGAACTGGAA 600
consensus_911#1 ------------------------------------------------------------
consensus_911#0 GTTCAGAATTTACCTTTCCATGAAACGCTC 630
consensus_911#1 ------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |