Revision
92 -
Directory Listing
Modified
Mon Oct 3 21:36:42 2011 UTC
(12 years, 11 months ago)
by
gpertea
switching to gclib/GAlnExtend
Revision
89 -
Directory Listing
Modified
Mon Oct 3 18:42:24 2011 UTC
(12 years, 11 months ago)
by
gpertea
separate wrappers for 5' and 3' alignments
Revision
87 -
Directory Listing
Modified
Sun Oct 2 19:12:03 2011 UTC
(12 years, 11 months ago)
by
gpertea
disable pointer arithmetic in GXGreedyExtend(), it's bad
Revision
86 -
Directory Listing
Modified
Fri Sep 30 21:38:39 2011 UTC
(12 years, 11 months ago)
by
gpertea
fixed a few more subtle bugs
Revision
85 -
Directory Listing
Modified
Fri Sep 30 20:38:13 2011 UTC
(12 years, 11 months ago)
by
gpertea
rewrote, set params X=8, M=2, N=3
Revision
84 -
Directory Listing
Modified
Fri Sep 30 03:19:32 2011 UTC
(12 years, 11 months ago)
by
gpertea
wip bad
Revision
83 -
Directory Listing
Modified
Thu Sep 29 21:32:42 2011 UTC
(12 years, 11 months ago)
by
gpertea
wip
Revision
82 -
Directory Listing
Modified
Thu Sep 29 20:46:39 2011 UTC
(12 years, 11 months ago)
by
gpertea
wip
Revision
81 -
Directory Listing
Modified
Thu Sep 29 19:02:24 2011 UTC
(12 years, 11 months ago)
by
gpertea
fixes, still a bug with flast_d[d] = flast_d[d] - flower + 2;
Revision
80 -
Directory Listing
Modified
Wed Sep 28 21:12:17 2011 UTC
(12 years, 11 months ago)
by
gpertea
wip
Revision
79 -
Directory Listing
Modified
Wed Sep 28 19:54:42 2011 UTC
(12 years, 11 months ago)
by
gpertea
wip, fixed memory leaks
Revision
78 -
Directory Listing
Modified
Wed Sep 28 03:20:10 2011 UTC
(12 years, 11 months ago)
by
gpertea
3' match seems to work, needs a few refinements
Revision
77 -
Directory Listing
Modified
Tue Sep 27 21:07:59 2011 UTC
(12 years, 11 months ago)
by
gpertea
wip - cutting seeds, finalize()
Revision
75 -
Directory Listing
Modified
Tue Sep 27 02:24:57 2011 UTC
(12 years, 11 months ago)
by
gpertea
implementing GreedyAlign for best rseeds etc.
Revision
74 -
Directory Listing
Modified
Tue Sep 27 01:22:37 2011 UTC
(12 years, 11 months ago)
by
gpertea
added seqalign files
Revision
73 -
Directory Listing
Added
Tue Sep 27 01:20:53 2011 UTC
(12 years, 11 months ago)
by
gpertea
creating seqalign storage