| Revision: | 29 |
| Committed: | Tue Aug 2 21:24:54 2011 UTC (13 years, 1 month ago) by gpertea | File size: | 390 byte(s) |
| Log Message: | adding tophat source work |
| Line | User | Rev | File contents |
|---|---|---|---|
| 1 | gpertea | 29 | #ifndef WIGGLES_H |
| 2 | #define WIGGLES_H | ||
| 3 | |||
| 4 | /* | ||
| 5 | * wiggles.h | ||
| 6 | * TopHat | ||
| 7 | * | ||
| 8 | * Created by Cole Trapnell on 12/12/08. | ||
| 9 | * Copyright 2008 Cole Trapnell. All rights reserved. | ||
| 10 | * | ||
| 11 | */ | ||
| 12 | |||
| 13 | #include "common.h" | ||
| 14 | #include "bwt_map.h" | ||
| 15 | |||
| 16 | void print_wiggle_header(FILE* coverage_out); | ||
| 17 | void print_wiggle_for_ref(FILE* coverage_out, | ||
| 18 | const string& ref_name, | ||
| 19 | const vector<unsigned int>& DoC); | ||
| 20 | |||
| 21 | |||
| 22 | #endif |