| Revision: | 29 |
| Committed: | Tue Aug 2 21:24:54 2011 UTC (13 years, 1 month ago) by gpertea | File size: | 390 byte(s) |
| Log Message: | adding tophat source work |
| Line | File contents |
|---|---|
| 1 | #ifndef WIGGLES_H |
| 2 | #define WIGGLES_H |
| 3 | |
| 4 | /* |
| 5 | * wiggles.h |
| 6 | * TopHat |
| 7 | * |
| 8 | * Created by Cole Trapnell on 12/12/08. |
| 9 | * Copyright 2008 Cole Trapnell. All rights reserved. |
| 10 | * |
| 11 | */ |
| 12 | |
| 13 | #include "common.h" |
| 14 | #include "bwt_map.h" |
| 15 | |
| 16 | void print_wiggle_header(FILE* coverage_out); |
| 17 | void print_wiggle_for_ref(FILE* coverage_out, |
| 18 | const string& ref_name, |
| 19 | const vector<unsigned int>& DoC); |
| 20 | |
| 21 | |
| 22 | #endif |