Next: PeCoP parameters
Up: How to use PeCoP
Previous: Sequence Input
Those are pretty standard parameters, which any user of PSI-BLAST should be
familiar with. (OK, OK, I'll write up this section a bit more extensively
later! However, you are welcome to go to:
http://www.ncbi.nlm.nih.gov/blast and read there).
Note that the default number of PSI-BLAST iterations is 2.
This does not generate a lot of information. Four iterations is the
recommended minimum.
Iddo Friedberg
2001-12-29