[BiO BB] pdb-l: monomer to trimer

[ilonak at post.tau.ac.il]

Hi Nikhil,

If you need to model a trimer given a monomer, you can try SymmDock:

http://bioinfo3d.cs.tau.ac.il/SymmDock/

Hope this helps,
Ilona

-- 
Ilona Kifer
Wolfson Structural Bioinformatics Lab
Tel Aviv University
Israel


Quoting "Dan Bolser" <dan.bolser at gmail.com>:

> If the trimer is part of the crystal structure, you can find it in PISA:
>
> http://www.ebi.ac.uk/msd-srv/prot_int/pistart.htm
>
>
> If the required symmetry operations are not present in the PDB file,
> you'll have to model the trimer... not sure of any online tool to to
> that...
>
> The best place for such questions is pdb-l (CC'ed), but please do post
> your findings back to the Bioinformatics.Org Forum.
>
>
> Cheers,
> Dan.
>
> On 5 October 2010 07:10, nikhil gadewal <ngadewal at yahoo.com> wrote:
>> Dear Users,
>>
>>           I would like to convert the monomer pdb structure into
>> trimer structure. Anyone know the online tool which does this job.
>>
>> Thanks in advance.
>>
>> Nikhil
>>
>>
>>
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