Basic Information
Gene ID 100038091
Gene Name sox21
Full Name Uncharacterized protein
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt F7EAA5 UniGene Str.24244
PDB NULL OMIM NULL
KEGG xtr:100038091 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_002939326 Gene3D G3DSA:1.10.30.10 IPR009071 6 86 8.00e-42 High mobility group box domain
XP_002939326 Pfam PF00505 IPR009071 8 76 3.00e-27 High mobility group box domain
XP_002939326 Pfam PF12336 IPR022097 77 95 2.10e-06 Transcription factor SOX
XP_002939326 ProSiteProfiles PS50118 IPR009071 8 76 0.00e-00 High mobility group box domain
XP_002939326 SMART SM00398 IPR009071 7 77 2.90e-31 High mobility group box domain
XP_002939326 SUPERFAMILY SSF47095 IPR009071 6 83 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_002939326 PF00505 1.5e-27 HMG_box HMG (high mobility group) box
XP_002939326 PF09011 5.1e-11 HMG_box_2 HMG-box domain
XP_002939326 PF12336 1.1e-06 SOXp SOX transcription factor

Gene Ontology Annotation
Protein Entry Name Space Description
XP_002939326 GO:0000122 biological_process negative regulation of transcription from RNA polymerase II promoter
XP_002939326 GO:0006351 biological_process transcription, DNA-templated
XP_002939326 GO:0006355 biological_process regulation of transcription, DNA-templated
XP_002939326 GO:0045892 biological_process negative regulation of transcription, DNA-templated
XP_002939326 GO:0005634 cellular_component nucleus
XP_002939326 GO:0003677 molecular_function DNA binding
XP_002939326 GO:0043565 molecular_function sequence-specific DNA binding