Basic Information
Gene ID 100054470
Gene Name PMS1
Full Name Uncharacterized protein
Organism Equus caballus [9796]

Cross Reference
UniProt F7BMS0 UniGene NULL
PDB NULL OMIM NULL
KEGG ecb:100054470 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_001502013 Gene3D G3DSA:1.10.30.10 IPR009071 572 637 5.90e-16 High mobility group box domain
XP_001502013 Gene3D G3DSA:3.30.230.10 IPR014721 204 337 5.20e-28 Ribosomal protein S5 domain 2-type fold, subgroup
XP_001502013 Gene3D G3DSA:3.30.565.10 IPR003594 2 203 5.80e-63 Histidine kinase-like ATPase, ATP-binding domain
XP_001502013 PANTHER PTHR10073 IPR002099 1 930 0.00e-00 DNA mismatch repair protein family
XP_001502013 Pfam PF00505 IPR009071 572 637 2.00e-13 High mobility group box domain
XP_001502013 Pfam PF01119 IPR013507 210 337 3.80e-26 DNA mismatch repair protein, C-terminal
XP_001502013 ProSitePatterns PS00058 IPR014762 91 97 - DNA mismatch repair, conserved site
XP_001502013 ProSiteProfiles PS50118 IPR009071 572 640 0.00e-00 High mobility group box domain
XP_001502013 SMART SM00387 IPR003594 16 151 7.20e-03 Histidine kinase-like ATPase, ATP-binding domain
XP_001502013 SMART SM00398 IPR009071 571 641 1.30e-23 High mobility group box domain
XP_001502013 SUPERFAMILY SSF47095 IPR009071 562 637 0.00e-00 High mobility group box domain
XP_001502013 SUPERFAMILY SSF54211 IPR020568 191 337 0.00e-00 Ribosomal protein S5 domain 2-type fold
XP_001502013 SUPERFAMILY SSF55874 IPR003594 16 202 0.00e-00 Histidine kinase-like ATPase, ATP-binding domain
XP_001502013 TIGRFAM TIGR00585 IPR002099 1 318 1.60e-97 DNA mismatch repair protein family

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_001502013 PF01119 1.1e-26 DNA_mis_repair DNA mismatch repair protein, C-terminal domain
XP_001502013 PF00505 6.9e-14 HMG_box HMG (high mobility group) box
XP_001502013 PF13589 2e-12 HATPase_c_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
XP_001502013 PF02518 1.5e-09 HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
XP_001502013 PF09011 1.5e-09 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
XP_001502013 GO:0006200 biological_process ATP catabolic process
XP_001502013 GO:0006298 biological_process mismatch repair
XP_001502013 GO:0007131 biological_process reciprocal meiotic recombination
XP_001502013 GO:0032300 cellular_component mismatch repair complex
XP_001502013 GO:0032389 cellular_component MutLalpha complex
XP_001502013 GO:0003697 molecular_function single-stranded DNA binding
XP_001502013 GO:0005524 molecular_function ATP binding
XP_001502013 GO:0016887 molecular_function ATPase activity
XP_001502013 GO:0030983 molecular_function mismatched DNA binding
XP_001502013 GO:0032407 molecular_function MutSalpha complex binding