Basic Information
Gene ID 100101689
Gene Name ctcf
Full Name Ctcf protein
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt B1H2R4 UniGene Str.970
PDB NULL OMIM NULL
KEGG xtr:100101689 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8364.ENSXETP00000034066

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001116268 Gene3D G3DSA:3.30.160.60 IPR013087 262 293 5.40e-09 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001116268 Gene3D G3DSA:3.30.160.60 IPR013087 294 321 2.00e-09 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001116268 Gene3D G3DSA:3.30.160.60 IPR013087 322 350 5.20e-09 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001116268 Gene3D G3DSA:3.30.160.60 IPR013087 351 377 1.90e-12 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001116268 Gene3D G3DSA:3.30.160.60 IPR013087 378 396 3.80e-11 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001116268 Gene3D G3DSA:3.30.160.60 IPR013087 397 430 9.40e-12 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001116268 Gene3D G3DSA:3.30.160.60 IPR013087 466 494 1.30e-07 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001116268 Gene3D G3DSA:3.30.160.60 IPR013087 495 513 1.10e-09 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001116268 Gene3D G3DSA:3.30.160.60 IPR013087 514 541 2.20e-09 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001116268 Pfam PF00096 IPR007087 435 458 2.90e-02 Zinc finger, C2H2
NP_001116268 ProSitePatterns PS00028 IPR007087 266 286 - Zinc finger, C2H2
NP_001116268 ProSitePatterns PS00028 IPR007087 294 314 - Zinc finger, C2H2
NP_001116268 ProSitePatterns PS00028 IPR007087 322 343 - Zinc finger, C2H2
NP_001116268 ProSitePatterns PS00028 IPR007087 407 428 - Zinc finger, C2H2
NP_001116268 ProSitePatterns PS00028 IPR007087 437 458 - Zinc finger, C2H2
NP_001116268 ProSitePatterns PS00028 IPR007087 467 487 - Zinc finger, C2H2
NP_001116268 ProSitePatterns PS00028 IPR007087 495 515 - Zinc finger, C2H2
NP_001116268 ProSitePatterns PS00028 IPR007087 523 544 - Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 264 291 0.00e-00 Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 292 319 0.00e-00 Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 320 348 0.00e-00 Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 349 376 0.00e-00 Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 377 404 0.00e-00 Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 405 433 0.00e-00 Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 435 463 0.00e-00 Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 465 492 0.00e-00 Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 493 520 0.00e-00 Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 521 544 0.00e-00 Zinc finger, C2H2
NP_001116268 ProSiteProfiles PS50157 IPR007087 553 580 0.00e-00 Zinc finger, C2H2
NP_001116268 SMART SM00355 IPR015880 264 286 4.10e-07 Zinc finger, C2H2-like
NP_001116268 SMART SM00355 IPR015880 292 314 2.40e-05 Zinc finger, C2H2-like
NP_001116268 SMART SM00355 IPR015880 320 343 2.30e-06 Zinc finger, C2H2-like
NP_001116268 SMART SM00355 IPR015880 349 371 1.70e-05 Zinc finger, C2H2-like
NP_001116268 SMART SM00355 IPR015880 377 399 6.80e-06 Zinc finger, C2H2-like
NP_001116268 SMART SM00355 IPR015880 405 428 6.70e-04 Zinc finger, C2H2-like
NP_001116268 SMART SM00355 IPR015880 435 458 3.20e-04 Zinc finger, C2H2-like
NP_001116268 SMART SM00355 IPR015880 465 487 5.00e-04 Zinc finger, C2H2-like
NP_001116268 SMART SM00355 IPR015880 493 515 3.60e-04 Zinc finger, C2H2-like
NP_001116268 SMART SM00355 IPR015880 521 544 8.20e-05 Zinc finger, C2H2-like
NP_001116268 SMART SM00355 IPR015880 553 573 4.50e-02 Zinc finger, C2H2-like
NP_001116268 SMART SM00384 IPR017956 658 670 8.60e-03 AT hook, DNA-binding motif

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001116268 PF13465 0 zf-H2C2_2 Zinc-finger double domain
NP_001116268 PF00096 1.7e-30 zf-C2H2 Zinc finger, C2H2 type
NP_001116268 PF13894 2.2e-23 zf-C2H2_4 C2H2-type zinc finger
NP_001116268 PF12171 1.8e-07 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding
NP_001116268 PF13909 2.3e-05 zf-H2C2_5 C2H2-type zinc-finger domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001116268 GO:0006351 biological_process transcription, DNA-templated
NP_001116268 GO:0005634 cellular_component nucleus
NP_001116268 GO:0003677 molecular_function DNA binding
NP_001116268 GO:0046872 molecular_function metal ion binding