Basic Information
Gene ID 100179943
Gene Name LOC100179943
Full Name Uncharacterized protein
Organism Ciona intestinalis [7719]

Cross Reference
UniProt F6SEF1 UniGene Cin.24591
PDB NULL OMIM NULL
KEGG cin:100179943 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_002119394 Gene3D G3DSA:1.10.10.10 IPR011991 176 242 2.20e-30 Winged helix-turn-helix DNA-binding domain
XP_002119394 PANTHER PTHR10445 IPR003196 9 256 0.00e-00 Transcription initiation factor IIF, beta subunit
XP_002119394 Pfam PF02270 IPR003196 100 241 5.50e-46 Transcription initiation factor IIF, beta subunit
XP_002119394 Pfam PF02270 IPR003196 7 102 4.50e-17 Transcription initiation factor IIF, beta subunit
XP_002119394 SUPERFAMILY SSF50916 IPR011039 6 119 0.00e-00 Transcription Factor IIF, Rap30/Rap74, interaction

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_002119394 PF02270 0 TFIIF_beta Transcription initiation factor IIF, beta subunit

Gene Ontology Annotation
Protein Entry Name Space Description
XP_002119394 GO:0006355 biological_process regulation of transcription, DNA-templated
XP_002119394 GO:0006367 biological_process transcription initiation from RNA polymerase II promoter
XP_002119394 GO:0005674 cellular_component transcription factor TFIIF complex
XP_002119394 GO:0003677 molecular_function DNA binding
XP_002119394 GO:0005524 molecular_function ATP binding
XP_002119394 GO:0008026 molecular_function ATP-dependent helicase activity