Basic Information
Gene ID 100303477
Gene Name lhx2/9
Full Name Lim homeobox 2/9 protein
Organism Saccoglossus kowalevskii [10224]

Cross Reference
UniProt B5M229 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001158443 Gene3D G3DSA:1.10.10.60 IPR009057 245 315 3.40e-21 Homeodomain-like
NP_001158443 Gene3D G3DSA:2.10.110.10 IPR001781 119 178 1.70e-16 Zinc finger, LIM-type
NP_001158443 Gene3D G3DSA:2.10.110.10 IPR001781 58 117 1.10e-14 Zinc finger, LIM-type
NP_001158443 Pfam PF00046 IPR001356 259 315 1.30e-18 Homeobox domain
NP_001158443 Pfam PF00412 IPR001781 121 177 8.50e-17 Zinc finger, LIM-type
NP_001158443 Pfam PF00412 IPR001781 59 116 2.80e-15 Zinc finger, LIM-type
NP_001158443 ProSitePatterns PS00478 IPR001781 121 156 - Zinc finger, LIM-type
NP_001158443 ProSitePatterns PS00478 IPR001781 59 93 - Zinc finger, LIM-type
NP_001158443 ProSiteProfiles PS50023 IPR001781 119 181 0.00e-00 Zinc finger, LIM-type
NP_001158443 ProSiteProfiles PS50023 IPR001781 57 118 0.00e-00 Zinc finger, LIM-type
NP_001158443 ProSiteProfiles PS50071 IPR001356 256 316 0.00e-00 Homeobox domain
NP_001158443 SMART SM00132 IPR001781 120 174 1.80e-20 Zinc finger, LIM-type
NP_001158443 SMART SM00132 IPR001781 58 111 6.80e-20 Zinc finger, LIM-type
NP_001158443 SMART SM00389 IPR001356 258 320 3.70e-24 Homeobox domain
NP_001158443 SUPERFAMILY SSF46689 IPR009057 248 315 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001158443 PF00412 1.4e-32 LIM LIM domain
NP_001158443 PF00046 1.3e-18 Homeobox Homeobox domain
NP_001158443 PF05920 0.00047 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001158443 GO:0008045 biological_process motor neuron axon guidance
NP_001158443 GO:0045892 biological_process negative regulation of transcription, DNA-templated
NP_001158443 GO:0005634 cellular_component nucleus
NP_001158443 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
NP_001158443 GO:0003714 molecular_function transcription corepressor activity
NP_001158443 GO:0008270 molecular_function zinc ion binding
NP_001158443 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100114768 7029 Acyrthosiphon pisum 100165973
13616 Monodelphis domestica 100015475 9986 Oryctolagus cuniculus 100344590
30195 Bombus terrestris 100646476 8128 Oreochromis niloticus 100712145
10141 Cavia porcellus 100735284 132113 Bombus impatiens 100747359
143995 Megachile rotundata 100875146 34638 Metaseiulus occidentalis 100897552
30611 Otolemur garnettii 100945686 9597 Pan paniscus 100992338
39432 Saimiri boliviensis 101030620 9669 Mustela putorius furo 101677768
43179 Ictidomys tridecemlineatus 101958115 10090 Mus musculus 16876
9823 Sus scrofa 397597 9615 Canis familiaris 490257
9913 Bos taurus 515012 7955 Danio rerio 550405
7668 Strongylocentrotus purpuratus 576656 7460 Apis mellifera 726415
9646 Ailuropoda melanoleuca ENSAMEG00000017592 9358 Choloepus hoffmanni ENSCHOG00000000991
9361 Dasypus novemcinctus ENSDNOG00000000979 10020 Dipodomys ordii ENSDORG00000002192
9796 Equus caballus ENSECAG00000009405 9365 Erinaceus europaeus ENSEEUG00000007785
9685 Felis catus ENSFCAG00000001815 69293 Gasterosteus aculeatus ENSGACG00000007885
9595 Gorilla gorilla ENSGGOG00000006853 8049 Gadus morhua ENSGMOG00000012946
7897 Latimeria chalumnae ENSLACG00000018819 9103 Meleagris gallopavo ENSMGAG00000005807
9544 Macaca mulatta ENSMMUG00000012259 9258 Ornithorhynchus anatinus ENSOANG00000002003
9978 Ochotona princeps ENSOPRG00000012003 132908 Pteropus vampyrus ENSPVAG00000017007
37347 Tupaia belangeri ENSTBEG00000005026 59729 Taeniopygia guttata ENSTGUG00000004361
99883 Tetraodon nigroviridis ENSTNIG00000010177 30538 Vicugna pacos ENSVPAG00000003940
8083 Xiphophorus maculatus ENSXMAG00000003908 9483 Callithrix jacchus 100387216
8364 Xenopus tropicalis 100486746 10029 Cricetulus griseus 100763500
7463 Apis florea 100872145 9555 Papio anubis 101006478
31033 Takifugu rubripes 101074897 7227 Drosophila melanogaster 35509
9606 Homo sapiens 56956 7070 Tribolium castaneum 658719
28377 Anolis carolinensis ENSACAG00000014568 9371 Echinops telfairi ENSETEG00000019576
9031 Gallus gallus ENSGALG00000002223 9785 Loxodonta africana ENSLAFG00000007278
9315 Macropus eugenii ENSMEUG00000011263 30608 Microcebus murinus ENSMICG00000009968
59463 Myotis lucifugus ENSMLUG00000016917 61853 Nomascus leucogenys ENSNLEG00000018062
8090 Oryzias latipes ENSORLG00000008756 9813 Procavia capensis ENSPCAG00000005532
13735 Pelodiscus sinensis ENSPSIG00000004916 9598 Pan troglodytes ENSPTRG00000001814
42254 Sorex araneus ENSSARG00000014321 9305 Sarcophilus harrisii ENSSHAG00000012386
9478 Tarsius syrichta ENSTSYG00000001931 9739 Tursiops truncatus ENSTTRG00000010990