
Basic Information | |||
| Gene ID | 100712340 | ||
| Gene Name | LOC100712340 | ||
| Full Name | Uncharacterized protein | ||
| Organism | Oreochromis niloticus [8128] | ||
Cross Reference | |||
| UniProt | I3JFU3 | UniGene | NULL |
| PDB | NULL | OMIM | NULL |
| KEGG | NULL | UCSC | NULL |
Protein Interactions | |
| DIP | NULL |
| IntAct | NULL |
| MINT | NULL |
| STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
| Protein | Program | Term | IPRS | Start | End | Score | Description |
| XP_003439290 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 63 | 144 | 6.40e-34 | High mobility group box domain |
| XP_003439290 | Pfam | PF00505 | IPR009071 | 65 | 133 | 8.00e-25 | High mobility group box domain |
| XP_003439290 | Pfam | PF12067 | IPR021934 | 190 | 395 | 2.40e-70 | Sox C-terminal transactivation domain |
| XP_003439290 | ProSiteProfiles | PS50118 | IPR009071 | 65 | 133 | 0.00e-00 | High mobility group box domain |
| XP_003439290 | ProSiteProfiles | PS51516 | IPR021934 | 279 | 396 | 0.00e-00 | Sox C-terminal transactivation domain |
| XP_003439290 | SMART | SM00398 | IPR009071 | 64 | 134 | 9.40e-30 | High mobility group box domain |
| XP_003439290 | SUPERFAMILY | SSF47095 | IPR009071 | 52 | 137 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
| Protein | Pfam ID | E.value | Name | Description |
| XP_003439290 | PF12067 | 0 | Sox_C_TAD | Sox C-terminal transactivation domain |
| XP_003439290 | PF00505 | 4.8e-25 | HMG_box | HMG (high mobility group) box |
| XP_003439290 | PF09011 | 1.7e-11 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
| Protein | Entry | Name Space | Description |
| XP_003439290 | GO:0006351 | biological_process | transcription, DNA-templated |
| XP_003439290 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
| XP_003439290 | GO:0007275 | biological_process | multicellular organismal development |
| XP_003439290 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
| XP_003439290 | GO:0005634 | cellular_component | nucleus |
| XP_003439290 | GO:0003677 | molecular_function | DNA binding |
| XP_003439290 | GO:0043565 | molecular_function | sequence-specific DNA binding |