Basic Information | |||
Gene ID | 100768081 | ||
Gene Name | LOC100768081 | ||
Full Name | PREDICTED: probable RNA-binding protein 20-like [Cricetulusgriseus]. | ||
Organism | Cricetulus griseus [10029] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003510855 | Gene3D | G3DSA:3.30.70.330 | IPR012677 | 486 | 582 | 9.60e-21 | Nucleotide-binding, alpha-beta plait |
XP_003510855 | ProSiteProfiles | PS50102 | IPR000504 | 497 | 572 | 0.00e-00 | RNA recognition motif domain |
XP_003510855 | ProSiteProfiles | PS50171 | IPR000690 | 1132 | 1163 | 0.00e-00 | Zinc finger, C2H2-type matrin |
XP_003510855 | SMART | SM00355 | IPR015880 | 1132 | 1157 | 1.10e-01 | Zinc finger, C2H2-like |
XP_003510855 | SMART | SM00355 | IPR015880 | 392 | 416 | 1.60e-02 | Zinc finger, C2H2-like |
XP_003510855 | SMART | SM00360 | IPR000504 | 498 | 568 | 4.70e-08 | RNA recognition motif domain |
XP_003510855 | SMART | SM00451 | IPR003604 | 1129 | 1164 | 3.30e-08 | Zinc finger, U1-type |
XP_003510855 | SMART | SM00451 | IPR003604 | 389 | 423 | 3.10e-03 | Zinc finger, U1-type |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003510855 | PF13893 | 1.2e-10 | RRM_5 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
XP_003510855 | PF14259 | 4.8e-08 | RRM_6 | RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) |
XP_003510855 | PF12171 | 1.7e-06 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9597 | Pan paniscus | 100978199 | 9555 | Papio anubis | 101020024 |
9595 | Gorilla gorilla | 101133581 | 9669 | Mustela putorius furo | 101694542 |
9598 | Pan troglodytes | 450732 | 28377 | Anolis carolinensis | ENSACAG00000015746 |
9913 | Bos taurus | ENSBTAG00000023891 | 9615 | Canis familiaris | ENSCAFG00000010785 |
9365 | Erinaceus europaeus | ENSEEUG00000010930 | 9371 | Echinops telfairi | ENSETEG00000013052 |
9685 | Felis catus | ENSFCAG00000012053 | 69293 | Gasterosteus aculeatus | ENSGACG00000018707 |
9031 | Gallus gallus | ENSGALG00000008697 | 7897 | Latimeria chalumnae | ENSLACG00000012822 |
9315 | Macropus eugenii | ENSMEUG00000001706 | 9103 | Meleagris gallopavo | ENSMGAG00000010838 |
59463 | Myotis lucifugus | ENSMLUG00000013793 | 9544 | Macaca mulatta | ENSMMUG00000020181 |
9258 | Ornithorhynchus anatinus | ENSOANG00000001595 | 9986 | Oryctolagus cuniculus | ENSOCUG00000016811 |
8128 | Oreochromis niloticus | ENSONIG00000016294 | 9978 | Ochotona princeps | ENSOPRG00000015417 |
9601 | Pongo abelii | ENSPPYG00000002648 | 13735 | Pelodiscus sinensis | ENSPSIG00000010135 |
132908 | Pteropus vampyrus | ENSPVAG00000016245 | 9305 | Sarcophilus harrisii | ENSSHAG00000012423 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000007347 | 99883 | Tetraodon nigroviridis | ENSTNIG00000010582 |
31033 | Takifugu rubripes | ENSTRUG00000007636 | 9478 | Tarsius syrichta | ENSTSYG00000005719 |
9739 | Tursiops truncatus | ENSTTRG00000006967 | 8364 | Xenopus tropicalis | ENSXETG00000025245 |
39432 | Saimiri boliviensis | 101035210 | 13616 | Monodelphis domestica | ENSMODG00000010399 |
61853 | Nomascus leucogenys | ENSNLEG00000015535 |