Basic Information | |||
Gene ID | 100998938 | ||
Gene Name | PRDM13 | ||
Full Name | PREDICTED: PR domain zinc finger protein 13 [Papio anubis]. | ||
Organism | Papio anubis [9555] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003897996 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 575 | 592 | 1.70e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003897996 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 593 | 625 | 5.10e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003897996 | Pfam | PF00096 | IPR007087 | 137 | 159 | 5.70e-03 | Zinc finger, C2H2 |
XP_003897996 | ProSitePatterns | PS00028 | IPR007087 | 139 | 159 | - | Zinc finger, C2H2 |
XP_003897996 | ProSitePatterns | PS00028 | IPR007087 | 576 | 596 | - | Zinc finger, C2H2 |
XP_003897996 | ProSitePatterns | PS00028 | IPR007087 | 604 | 624 | - | Zinc finger, C2H2 |
XP_003897996 | ProSitePatterns | PS00028 | IPR007087 | 633 | 654 | - | Zinc finger, C2H2 |
XP_003897996 | ProSiteProfiles | PS50157 | IPR007087 | 137 | 159 | 0.00e-00 | Zinc finger, C2H2 |
XP_003897996 | ProSiteProfiles | PS50157 | IPR007087 | 574 | 601 | 0.00e-00 | Zinc finger, C2H2 |
XP_003897996 | ProSiteProfiles | PS50157 | IPR007087 | 602 | 629 | 0.00e-00 | Zinc finger, C2H2 |
XP_003897996 | ProSiteProfiles | PS50157 | IPR007087 | 631 | 659 | 0.00e-00 | Zinc finger, C2H2 |
XP_003897996 | ProSiteProfiles | PS50280 | IPR001214 | 1 | 112 | 0.00e-00 | SET domain |
XP_003897996 | SMART | SM00317 | IPR001214 | 2 | 118 | 9.40e-03 | SET domain |
XP_003897996 | SMART | SM00355 | IPR015880 | 137 | 159 | 1.10e-04 | Zinc finger, C2H2-like |
XP_003897996 | SMART | SM00355 | IPR015880 | 574 | 596 | 1.50e-04 | Zinc finger, C2H2-like |
XP_003897996 | SMART | SM00355 | IPR015880 | 602 | 624 | 6.40e-05 | Zinc finger, C2H2-like |
XP_003897996 | SMART | SM00355 | IPR015880 | 631 | 654 | 9.10e-07 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003897996 | PF00096 | 1.7e-17 | zf-C2H2 | Zinc finger, C2H2 type |
XP_003897996 | PF13465 | 3.9e-10 | zf-H2C2_2 | Zinc-finger double domain |
XP_003897996 | PF12171 | 2.8e-07 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
XP_003897996 | PF13894 | 5.3e-06 | zf-C2H2_4 | C2H2-type zinc finger |
XP_003897996 | PF02892 | 0.00021 | zf-BED | BED zinc finger |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003897996 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003897996 | GO:0005634 | cellular_component | nucleus |
XP_003897996 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100120926 | 7463 | Apis florea | 100870304 |
143995 | Megachile rotundata | 100877456 | 9597 | Pan paniscus | 100970486 |
6087 | Hydra magnipapillata | 100213962 | 10224 | Saccoglossus kowalevskii | 100377590 |
30195 | Bombus terrestris | 100649540 | 132113 | Bombus impatiens | 100743194 |
7668 | Strongylocentrotus purpuratus | 100891592 | 34638 | Metaseiulus occidentalis | 100905112 |
9669 | Mustela putorius furo | 101693512 | 13735 | Pelodiscus sinensis | 102449510 |
7227 | Drosophila melanogaster | 38713 | 9913 | Bos taurus | 510505 |
7070 | Tribolium castaneum | 659388 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000008949 |
9483 | Callithrix jacchus | ENSCJAG00000001421 | 10020 | Dipodomys ordii | ENSDORG00000003558 |
9796 | Equus caballus | ENSECAG00000007855 | 9595 | Gorilla gorilla | ENSGGOG00000006947 |
8049 | Gadus morhua | ENSGMOG00000006125 | 9785 | Loxodonta africana | ENSLAFG00000012439 |
9315 | Macropus eugenii | ENSMEUG00000010198 | 30608 | Microcebus murinus | ENSMICG00000001097 |
9978 | Ochotona princeps | ENSOPRG00000004507 | 9601 | Pongo abelii | ENSPPYG00000016866 |
132908 | Pteropus vampyrus | ENSPVAG00000001695 | 9305 | Sarcophilus harrisii | ENSSHAG00000013340 |
9823 | Sus scrofa | ENSSSCG00000004354 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000016567 |
37347 | Tupaia belangeri | ENSTBEG00000007590 | 31033 | Takifugu rubripes | ENSTRUG00000000334 |
9739 | Tursiops truncatus | ENSTTRG00000004705 | 30538 | Vicugna pacos | ENSVPAG00000001403 |
8083 | Xiphophorus maculatus | ENSXMAG00000002547 | 39432 | Saimiri boliviensis | 101042329 |
9615 | Canis familiaris | ENSCAFG00000023314 | 9358 | Choloepus hoffmanni | ENSCHOG00000011613 |
7955 | Danio rerio | ENSDARG00000078701 | 9361 | Dasypus novemcinctus | ENSDNOG00000006520 |
9371 | Echinops telfairi | ENSETEG00000004709 | 9685 | Felis catus | ENSFCAG00000010288 |
69293 | Gasterosteus aculeatus | ENSGACG00000005032 | 7897 | Latimeria chalumnae | ENSLACG00000008814 |
59463 | Myotis lucifugus | ENSMLUG00000001899 | 13616 | Monodelphis domestica | ENSMODG00000018089 |
30611 | Otolemur garnettii | ENSOGAG00000031927 | 8128 | Oreochromis niloticus | ENSONIG00000000112 |
8090 | Oryzias latipes | ENSORLG00000002129 | 9598 | Pan troglodytes | ENSPTRG00000018445 |
10116 | Rattus norvegicus | ENSRNOG00000007683 | 99883 | Tetraodon nigroviridis | ENSTNIG00000006867 |
8364 | Xenopus tropicalis | ENSXETG00000032719 |