
Basic Information | |||
| Gene ID | 101042864 | ||
| Gene Name | VDR | ||
| Full Name | PREDICTED: vitamin D3 receptor isoform 1 [Saimiri boliviensisboliviensis]. | ||
| Organism | Saimiri boliviensis [39432] | ||
Cross Reference | |||
| UniProt | NULL | UniGene | NULL |
| PDB | NULL | OMIM | NULL |
| KEGG | NULL | UCSC | NULL |
Protein Interactions | |
| DIP | NULL |
| IntAct | NULL |
| MINT | NULL |
| STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
| Protein | Program | Term | IPRS | Start | End | Score | Description |
| XP_003941499 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 121 | 175 | 9.30e-67 | Nuclear hormone receptor, ligand-binding |
| XP_003941499 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 225 | 423 | 9.30e-67 | Nuclear hormone receptor, ligand-binding |
| XP_003941499 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 22 | 108 | 3.00e-28 | Zinc finger, NHR/GATA-type |
| XP_003941499 | Pfam | PF00104 | IPR000536 | 221 | 405 | 1.00e-29 | Nuclear hormone receptor, ligand-binding, core |
| XP_003941499 | Pfam | PF00105 | IPR001628 | 23 | 91 | 1.80e-28 | Zinc finger, nuclear hormone receptor-type |
| XP_003941499 | PRINTS | PR00047 | IPR001628 | 24 | 40 | 2.70e-16 | Zinc finger, nuclear hormone receptor-type |
| XP_003941499 | PRINTS | PR00047 | IPR001628 | 40 | 55 | 2.70e-16 | Zinc finger, nuclear hormone receptor-type |
| XP_003941499 | PRINTS | PR00047 | IPR001628 | 73 | 81 | 2.70e-16 | Zinc finger, nuclear hormone receptor-type |
| XP_003941499 | PRINTS | PR00047 | IPR001628 | 81 | 89 | 2.70e-16 | Zinc finger, nuclear hormone receptor-type |
| XP_003941499 | PRINTS | PR00350 | IPR000324 | 14 | 25 | 7.90e-34 | Vitamin D receptor |
| XP_003941499 | PRINTS | PR00350 | IPR000324 | 146 | 158 | 7.90e-34 | Vitamin D receptor |
| XP_003941499 | PRINTS | PR00350 | IPR000324 | 187 | 199 | 7.90e-34 | Vitamin D receptor |
| XP_003941499 | PRINTS | PR00350 | IPR000324 | 232 | 242 | 7.90e-34 | Vitamin D receptor |
| XP_003941499 | PRINTS | PR00350 | IPR000324 | 288 | 300 | 7.90e-34 | Vitamin D receptor |
| XP_003941499 | PRINTS | PR00350 | IPR000324 | 62 | 73 | 7.90e-34 | Vitamin D receptor |
| XP_003941499 | PRINTS | PR00398 | IPR001723 | 232 | 253 | 2.30e-22 | Steroid hormone receptor |
| XP_003941499 | PRINTS | PR00398 | IPR001723 | 253 | 269 | 2.30e-22 | Steroid hormone receptor |
| XP_003941499 | PRINTS | PR00398 | IPR001723 | 322 | 337 | 2.30e-22 | Steroid hormone receptor |
| XP_003941499 | PRINTS | PR00398 | IPR001723 | 381 | 398 | 2.30e-22 | Steroid hormone receptor |
| XP_003941499 | PRINTS | PR00398 | IPR001723 | 85 | 95 | 2.30e-22 | Steroid hormone receptor |
| XP_003941499 | ProSitePatterns | PS00031 | IPR001628 | 24 | 50 | - | Zinc finger, nuclear hormone receptor-type |
| XP_003941499 | ProSiteProfiles | PS51030 | IPR001628 | 21 | 96 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
| XP_003941499 | SMART | SM00399 | IPR001628 | 21 | 92 | 4.60e-37 | Zinc finger, nuclear hormone receptor-type |
| XP_003941499 | SMART | SM00430 | IPR000536 | 231 | 393 | 2.50e-38 | Nuclear hormone receptor, ligand-binding, core |
| XP_003941499 | SUPERFAMILY | SSF48508 | IPR008946 | 124 | 421 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
| Protein | Pfam ID | E.value | Name | Description |
| XP_003941499 | PF00104 | 5.6e-30 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
| XP_003941499 | PF00105 | 7.5e-29 | zf-C4 | Zinc finger, C4 type (two domains) |
Gene Ontology Annotation | |||
| Protein | Entry | Name Space | Description |
| XP_003941499 | GO:0005634 | cellular_component | nucleus |
| XP_003941499 | GO:0003707 | molecular_function | steroid hormone receptor activity |
| XP_003941499 | GO:0008270 | molecular_function | zinc ion binding |
| XP_003941499 | GO:0008434 | molecular_function | calcitriol receptor activity |
| XP_003941499 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
| TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
| 9483 | Callithrix jacchus | 100399941 | 61853 | Nomascus leucogenys | 100590313 |
| 8128 | Oreochromis niloticus | 100696631 | 30611 | Otolemur garnettii | 100963533 |
| 9597 | Pan paniscus | 100982355 | 9555 | Papio anubis | 101026835 |
| 9595 | Gorilla gorilla | 101126712 | 9669 | Mustela putorius furo | 101685653 |
| 43179 | Ictidomys tridecemlineatus | 101961529 | 9823 | Sus scrofa | 396628 |
| 9615 | Canis familiaris | 486588 | 28377 | Anolis carolinensis | ENSACAG00000013485 |
| 9646 | Ailuropoda melanoleuca | ENSAMEG00000013706 | 9358 | Choloepus hoffmanni | ENSCHOG00000008514 |
| 10141 | Cavia porcellus | ENSCPOG00000006025 | 7955 | Danio rerio | ENSDARG00000043059 |
| 9365 | Erinaceus europaeus | ENSEEUG00000011116 | 9685 | Felis catus | ENSFCAG00000024594 |
| 69293 | Gasterosteus aculeatus | ENSGACG00000004763 | 9031 | Gallus gallus | ENSGALG00000026166 |
| 8049 | Gadus morhua | ENSGMOG00000019451 | 9315 | Macropus eugenii | ENSMEUG00000014791 |
| 9103 | Meleagris gallopavo | ENSMGAG00000004846 | 30608 | Microcebus murinus | ENSMICG00000009017 |
| 13616 | Monodelphis domestica | ENSMODG00000028774 | 9258 | Ornithorhynchus anatinus | ENSOANG00000011396 |
| 9986 | Oryctolagus cuniculus | ENSOCUG00000027507 | 8090 | Oryzias latipes | ENSORLG00000001063 |
| 9813 | Procavia capensis | ENSPCAG00000007712 | 7757 | Petromyzon marinus | ENSPMAG00000000180 |
| 10116 | Rattus norvegicus | ENSRNOG00000008574 | 9305 | Sarcophilus harrisii | ENSSHAG00000001012 |
| 37347 | Tupaia belangeri | ENSTBEG00000005717 | 59729 | Taeniopygia guttata | ENSTGUG00000017093 |
| 99883 | Tetraodon nigroviridis | ENSTNIG00000005559 | 31033 | Takifugu rubripes | ENSTRUG00000011907 |
| 8083 | Xiphophorus maculatus | ENSXMAG00000004608 | 7897 | Latimeria chalumnae | 102360440 |
| 59463 | Myotis lucifugus | 102425669 | 10090 | Mus musculus | 22337 |
| 9796 | Equus caballus | ENSECAG00000015822 | 9371 | Echinops telfairi | ENSETEG00000006636 |
| 9978 | Ochotona princeps | ENSOPRG00000014613 | 9601 | Pongo abelii | ENSPPYG00000004448 |
| 13735 | Pelodiscus sinensis | ENSPSIG00000018108 | 132908 | Pteropus vampyrus | ENSPVAG00000011085 |
| 9478 | Tarsius syrichta | ENSTSYG00000003990 | 9739 | Tursiops truncatus | ENSTTRG00000012578 |
| 30538 | Vicugna pacos | ENSVPAG00000007916 | |||