Basic Information
Gene ID 175485
Gene Name lin-48; CELE_F34D10.5, F34D10.5
Full Name Protein LIN-48
Organism Caenorhabditis elegans [6239]

Cross Reference
UniProt G5EDU6 UniGene Cel.19582
PDB NULL OMIM NULL
KEGG cel:CELE_F34D10.5 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
F34D10.5 Gene3D G3DSA:3.30.160.60 IPR013087 134 162 6.90e-05 Zinc finger C2H2-type/integrase DNA-binding domain
F34D10.5 Gene3D G3DSA:3.30.160.60 IPR013087 163 182 2.10e-11 Zinc finger C2H2-type/integrase DNA-binding domain
F34D10.5 Gene3D G3DSA:3.30.160.60 IPR013087 183 209 3.10e-12 Zinc finger C2H2-type/integrase DNA-binding domain
F34D10.5 PANTHER PTHR10032 IPR027775 135 254 0.00e-00 C2H2- zinc finger protein family
F34D10.5 ProSitePatterns PS00028 IPR007087 135 155 - Zinc finger, C2H2
F34D10.5 ProSitePatterns PS00028 IPR007087 163 183 - Zinc finger, C2H2
F34D10.5 ProSitePatterns PS00028 IPR007087 191 212 - Zinc finger, C2H2
F34D10.5 ProSiteProfiles PS50157 IPR007087 133 160 0.00e-00 Zinc finger, C2H2
F34D10.5 ProSiteProfiles PS50157 IPR007087 161 188 0.00e-00 Zinc finger, C2H2
F34D10.5 ProSiteProfiles PS50157 IPR007087 189 212 0.00e-00 Zinc finger, C2H2
F34D10.5 SMART SM00355 IPR015880 133 155 8.10e-05 Zinc finger, C2H2-like
F34D10.5 SMART SM00355 IPR015880 161 183 6.30e-06 Zinc finger, C2H2-like
F34D10.5 SMART SM00355 IPR015880 189 212 1.70e-06 Zinc finger, C2H2-like
F34D10.5 SMART SM00355 IPR015880 228 251 7.00e-03 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
F34D10.5 PF13465 1.7e-15 zf-H2C2_2 Zinc-finger double domain
F34D10.5 PF00096 2.6e-15 zf-C2H2 Zinc finger, C2H2 type
F34D10.5 PF13894 3.2e-11 zf-C2H2_4 C2H2-type zinc finger

Gene Ontology Annotation
Protein Entry Name Space Description
F34D10.5 GO:0005634 cellular_component nucleus
F34D10.5 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
10224 Saccoglossus kowalevskii 100313696 9823 Sus scrofa 100511364
10029 Cricetulus griseus 100772317 7463 Apis florea 100862930
143995 Megachile rotundata 100878345 9597 Pan paniscus 100987995
43179 Ictidomys tridecemlineatus 101965172 7029 Acyrthosiphon pisum 100161874
28377 Anolis carolinensis 100560643 61853 Nomascus leucogenys 100589661
30195 Bombus terrestris 100643010 132113 Bombus impatiens 100743268
34638 Metaseiulus occidentalis 100907674 9555 Papio anubis 101014000
39432 Saimiri boliviensis 101035724 6087 Hydra magnipapillata 101236199
9669 Mustela putorius furo 101671418 7897 Latimeria chalumnae 102360229
10116 Rattus norvegicus 309164 8364 Xenopus tropicalis 448478
9615 Canis familiaris 483727 9606 Homo sapiens 58495
7070 Tribolium castaneum 663753 9544 Macaca mulatta 715797
7955 Danio rerio 792456 9646 Ailuropoda melanoleuca ENSAMEG00000017343
9913 Bos taurus ENSBTAG00000015001 9358 Choloepus hoffmanni ENSCHOG00000002029
9361 Dasypus novemcinctus ENSDNOG00000024062 10020 Dipodomys ordii ENSDORG00000016697
9796 Equus caballus ENSECAG00000007899 9365 Erinaceus europaeus ENSEEUG00000010161
9371 Echinops telfairi ENSETEG00000006907 9595 Gorilla gorilla ENSGGOG00000008101
9785 Loxodonta africana ENSLAFG00000015644 9103 Meleagris gallopavo ENSMGAG00000006770
30608 Microcebus murinus ENSMICG00000013034 59463 Myotis lucifugus ENSMLUG00000026760
13616 Monodelphis domestica ENSMODG00000005504 9986 Oryctolagus cuniculus ENSOCUG00000012116
30611 Otolemur garnettii ENSOGAG00000030325 9978 Ochotona princeps ENSOPRG00000006290
8090 Oryzias latipes ENSORLG00000005380 9813 Procavia capensis ENSPCAG00000016365
7757 Petromyzon marinus ENSPMAG00000004123 9601 Pongo abelii ENSPPYG00000003049
13735 Pelodiscus sinensis ENSPSIG00000006768 132908 Pteropus vampyrus ENSPVAG00000001140
42254 Sorex araneus ENSSARG00000006563 9305 Sarcophilus harrisii ENSSHAG00000018466
37347 Tupaia belangeri ENSTBEG00000010970 99883 Tetraodon nigroviridis ENSTNIG00000005499
31033 Takifugu rubripes ENSTRUG00000008625 7227 Drosophila melanogaster 31429
7668 Strongylocentrotus purpuratus 583158 9598 Pan troglodytes 737338
9483 Callithrix jacchus ENSCJAG00000009682 10141 Cavia porcellus ENSCPOG00000000009
9685 Felis catus ENSFCAG00000007902 69293 Gasterosteus aculeatus ENSGACG00000018794
8049 Gadus morhua ENSGMOG00000005759 9315 Macropus eugenii ENSMEUG00000011922
9258 Ornithorhynchus anatinus ENSOANG00000001250 8128 Oreochromis niloticus ENSONIG00000004778
9478 Tarsius syrichta ENSTSYG00000012790 9739 Tursiops truncatus ENSTTRG00000016430
8083 Xiphophorus maculatus ENSXMAG00000009866