Basic Information
Gene ID 176052
Gene Name hmg-4; T20B12.8
Full Name FACT complex subunit SSRP1-A
Organism Caenorhabditis elegans [6239]

Cross Reference
UniProt P41848 UniGene Cel.17160
PDB NULL OMIM NULL
KEGG cel:CELE_T20B12.8 UCSC T20B12.8

Protein Interactions
DIP DIP-26608N
IntAct NULL
MINT MINT-1083096
STRING 6239.T20B12.8

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
T20B12.8 Gene3D G3DSA:1.10.30.10 IPR009071 554 626 1.20e-22 High mobility group box domain
T20B12.8 Gene3D G3DSA:2.30.29.30 IPR011993 2 106 2.40e-17 Pleckstrin homology-like domain
T20B12.8 Pfam PF00505 IPR009071 556 622 3.80e-15 High mobility group box domain
T20B12.8 Pfam PF03531 IPR024954 73 285 4.30e-99 SSRP1 domain
T20B12.8 Pfam PF08512 IPR013719 339 429 8.80e-26 Domain of unknown function DUF1747
T20B12.8 PRINTS PR00887 IPR000969 210 226 9.40e-69 Structure-specific recognition protein
T20B12.8 PRINTS PR00887 IPR000969 232 248 9.40e-69 Structure-specific recognition protein
T20B12.8 PRINTS PR00887 IPR000969 255 271 9.40e-69 Structure-specific recognition protein
T20B12.8 PRINTS PR00887 IPR000969 319 332 9.40e-69 Structure-specific recognition protein
T20B12.8 PRINTS PR00887 IPR000969 346 364 9.40e-69 Structure-specific recognition protein
T20B12.8 PRINTS PR00887 IPR000969 364 381 9.40e-69 Structure-specific recognition protein
T20B12.8 PRINTS PR00887 IPR000969 389 405 9.40e-69 Structure-specific recognition protein
T20B12.8 PRINTS PR00887 IPR000969 405 423 9.40e-69 Structure-specific recognition protein
T20B12.8 ProSiteProfiles PS50118 IPR009071 556 622 0.00e-00 High mobility group box domain
T20B12.8 SMART SM00398 IPR009071 555 623 6.30e-25 High mobility group box domain
T20B12.8 SUPERFAMILY SSF47095 IPR009071 544 628 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
T20B12.8 PF03531 0 SSrecog Structure-specific recognition protein (SSRP1)
T20B12.8 PF08512 7.1e-27 Rtt106 Histone chaperone Rttp106-like
T20B12.8 PF00505 1.3e-15 HMG_box HMG (high mobility group) box
T20B12.8 PF09011 1e-14 HMG_box_2 HMG-box domain
T20B12.8 PF14887 0.00012 HMG_box_5 HMG (high mobility group) box 5

Gene Ontology Annotation
Protein Entry Name Space Description
T20B12.8 GO:0006260 biological_process DNA replication
T20B12.8 GO:0006281 biological_process DNA repair
T20B12.8 GO:0006355 biological_process regulation of transcription, DNA-templated
T20B12.8 GO:0005694 cellular_component chromosome
T20B12.8 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
10224 Saccoglossus kowalevskii 100378614 400682 Amphimedon queenslandica 100638464
34638 Metaseiulus occidentalis 100904934 9365 Erinaceus europaeus ENSEEUG00000015192
7719 Ciona intestinalis ENSCING00000000505 9361 Dasypus novemcinctus ENSDNOG00000003595
9796 Equus caballus ENSECAG00000016612 9258 Ornithorhynchus anatinus ENSOANG00000011895
9813 Procavia capensis ENSPCAG00000002259 132908 Pteropus vampyrus ENSPVAG00000002404
30538 Vicugna pacos ENSVPAG00000001635 8364 Xenopus tropicalis ENSXETG00000000781

Paralogs
172250