Basic Information
Gene ID 177543
Gene Name hmg-5; CELE_F45E4.9, F45E4.9
Full Name Protein HMG-5
Organism Caenorhabditis elegans [6239]

Cross Reference
UniProt Q94234 UniGene Cel.35565
PDB NULL OMIM NULL
KEGG cel:CELE_F45E4.9 UCSC F45E4.9

Protein Interactions
DIP NULL
IntAct Q94234
MINT NULL
STRING 6239.F45E4.9

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
F45E4.9.2 Gene3D G3DSA:1.10.30.10 IPR009071 127 201 1.60e-13 High mobility group box domain
F45E4.9.2 Gene3D G3DSA:1.10.30.10 IPR009071 34 112 3.50e-09 High mobility group box domain
F45E4.9.2 Pfam PF00505 IPR009071 40 84 7.40e-07 High mobility group box domain
F45E4.9.2 Pfam PF09011 IPR009071 131 188 3.90e-06 High mobility group box domain
F45E4.9.2 ProSiteProfiles PS50118 IPR009071 132 195 0.00e-00 High mobility group box domain
F45E4.9.2 SMART SM00398 IPR009071 131 196 1.90e-13 High mobility group box domain
F45E4.9.2 SMART SM00398 IPR009071 29 97 1.50e-05 High mobility group box domain
F45E4.9.2 SUPERFAMILY SSF47095 IPR009071 120 199 0.00e-00 High mobility group box domain
F45E4.9.2 SUPERFAMILY SSF47095 IPR009071 24 82 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
F45E4.9.2 PF09011 4.4e-11 HMG_box_2 HMG-box domain
F45E4.9.2 PF00505 3.3e-10 HMG_box HMG (high mobility group) box

Gene Ontology Annotation
Protein Entry Name Space Description
F45E4.9.2 GO:0006261 biological_process DNA-dependent DNA replication
F45E4.9.2 GO:0006351 biological_process transcription, DNA-templated
F45E4.9.2 GO:0006355 biological_process regulation of transcription, DNA-templated
F45E4.9.2 GO:0006356 biological_process regulation of transcription from RNA polymerase I promoter
F45E4.9.2 GO:0006390 biological_process transcription from mitochondrial promoter
F45E4.9.2 GO:0006391 biological_process transcription initiation from mitochondrial promoter
F45E4.9.2 GO:0010467 biological_process gene expression
F45E4.9.2 GO:0033108 biological_process mitochondrial respiratory chain complex assembly
F45E4.9.2 GO:0045893 biological_process positive regulation of transcription, DNA-templated
F45E4.9.2 GO:0005739 cellular_component mitochondrion
F45E4.9.2 GO:0005759 cellular_component mitochondrial matrix
F45E4.9.2 GO:0042645 cellular_component mitochondrial nucleoid
F45E4.9.2 GO:0003677 molecular_function DNA binding
F45E4.9.2 GO:0003682 molecular_function chromatin binding
F45E4.9.2 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
F45E4.9.2 GO:0005515 molecular_function protein binding
F45E4.9.2 GO:0008301 molecular_function DNA binding, bending
F45E4.9.2 GO:0031072 molecular_function heat shock protein binding
F45E4.9.2 GO:0044822 molecular_function poly(A) RNA binding
F45E4.9.2 GO:0070363 molecular_function mitochondrial light strand promoter sense binding