Basic Information
Gene ID 180672
Gene Name lim-4; LIM-4; CELE_ZC64.4, ZC64.4
Full Name Protein LIM-4
Organism Caenorhabditis elegans [6239]

Cross Reference
UniProt G5EEA1 UniGene Cel.665
PDB NULL OMIM NULL
KEGG cel:CELE_ZC64.4 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ZC64.4 Gene3D G3DSA:1.10.10.60 IPR009057 230 296 5.50e-21 Homeodomain-like
ZC64.4 Gene3D G3DSA:2.10.110.10 IPR001781 166 225 2.60e-16 Zinc finger, LIM-type
ZC64.4 Gene3D G3DSA:2.10.110.10 IPR001781 97 151 1.30e-12 Zinc finger, LIM-type
ZC64.4 Pfam PF00046 IPR001356 240 296 8.60e-18 Homeobox domain
ZC64.4 Pfam PF00412 IPR001781 168 224 1.10e-16 Zinc finger, LIM-type
ZC64.4 Pfam PF00412 IPR001781 98 152 1.10e-12 Zinc finger, LIM-type
ZC64.4 ProSitePatterns PS00478 IPR001781 168 203 - Zinc finger, LIM-type
ZC64.4 ProSitePatterns PS00478 IPR001781 98 132 - Zinc finger, LIM-type
ZC64.4 ProSiteProfiles PS50023 IPR001781 166 228 0.00e-00 Zinc finger, LIM-type
ZC64.4 ProSiteProfiles PS50023 IPR001781 96 155 0.00e-00 Zinc finger, LIM-type
ZC64.4 ProSiteProfiles PS50071 IPR001356 237 297 0.00e-00 Homeobox domain
ZC64.4 SMART SM00132 IPR001781 167 221 3.70e-20 Zinc finger, LIM-type
ZC64.4 SMART SM00132 IPR001781 97 148 4.90e-16 Zinc finger, LIM-type
ZC64.4 SMART SM00389 IPR001356 239 301 9.70e-24 Homeobox domain
ZC64.4 SUPERFAMILY SSF46689 IPR009057 230 297 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ZC64.4 PF00412 5.2e-29 LIM LIM domain
ZC64.4 PF00046 4.7e-18 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
ZC64.4 GO:0005634 cellular_component nucleus
ZC64.4 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ZC64.4 GO:0008270 molecular_function zinc ion binding
ZC64.4 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100116711 7029 Acyrthosiphon pisum 100166565
9823 Sus scrofa 100310798 10224 Saccoglossus kowalevskii 100372943
9601 Pongo abelii 100444419 10029 Cricetulus griseus 100769913
143995 Megachile rotundata 100878746 9555 Papio anubis 101025241
13735 Pelodiscus sinensis 102462206 13616 Monodelphis domestica 100014160
6087 Hydra magnipapillata 100198307 9483 Callithrix jacchus 100392368
30195 Bombus terrestris 100650334 8128 Oreochromis niloticus 100700223
132113 Bombus impatiens 100747481 7463 Apis florea 100865575
34638 Metaseiulus occidentalis 100907946 9597 Pan paniscus 100991624
39432 Saimiri boliviensis 101034291 9595 Gorilla gorilla 101138385
9669 Mustela putorius furo 101674221 10090 Mus musculus 16874
7227 Drosophila melanogaster 38451 7955 Danio rerio 445565
9913 Bos taurus 541261 7668 Strongylocentrotus purpuratus 579936
7070 Tribolium castaneum 659841 9646 Ailuropoda melanoleuca ENSAMEG00000000780
9615 Canis familiaris ENSCAFG00000020277 9358 Choloepus hoffmanni ENSCHOG00000004170
10020 Dipodomys ordii ENSDORG00000015860 9796 Equus caballus ENSECAG00000004881
9365 Erinaceus europaeus ENSEEUG00000015531 9371 Echinops telfairi ENSETEG00000009829
9685 Felis catus ENSFCAG00000018842 69293 Gasterosteus aculeatus ENSGACG00000013917
9031 Gallus gallus ENSGALG00000011369 9544 Macaca mulatta ENSMMUG00000011453
9986 Oryctolagus cuniculus ENSOCUG00000003641 8090 Oryzias latipes ENSORLG00000003999
10116 Rattus norvegicus ENSRNOG00000005996 42254 Sorex araneus ENSSARG00000006321
9305 Sarcophilus harrisii ENSSHAG00000011957 37347 Tupaia belangeri ENSTBEG00000002448
99883 Tetraodon nigroviridis ENSTNIG00000015588 9478 Tarsius syrichta ENSTSYG00000004753
9739 Tursiops truncatus ENSTTRG00000015391 30538 Vicugna pacos ENSVPAG00000001409
8083 Xiphophorus maculatus ENSXMAG00000003235 9606 Homo sapiens 26468
7460 Apis mellifera 725532 28377 Anolis carolinensis ENSACAG00000011289
10141 Cavia porcellus ENSCPOG00000010682 9361 Dasypus novemcinctus ENSDNOG00000002579
8049 Gadus morhua ENSGMOG00000013688 7897 Latimeria chalumnae ENSLACG00000009230
9785 Loxodonta africana ENSLAFG00000012133 9315 Macropus eugenii ENSMEUG00000011180
9103 Meleagris gallopavo ENSMGAG00000012149 30608 Microcebus murinus ENSMICG00000012199
59463 Myotis lucifugus ENSMLUG00000001749 9258 Ornithorhynchus anatinus ENSOANG00000013288
30611 Otolemur garnettii ENSOGAG00000015097 9978 Ochotona princeps ENSOPRG00000010365
132908 Pteropus vampyrus ENSPVAG00000000862 43179 Ictidomys tridecemlineatus ENSSTOG00000012618
59729 Taeniopygia guttata ENSTGUG00000006782 31033 Takifugu rubripes ENSTRUG00000016703
8364 Xenopus tropicalis ENSXETG00000016325