Basic Information
Gene ID 20671 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Sox17; Sox-17
Full Name Transcription factor SOX-17
Organism Mus musculus [10090]

Cross Reference
UniProt Q61473 UniGene Mm.279103
PDB 3F27 OMIM NULL
KEGG mmu:20671 UCSC uc007aey.1

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
REFSEQ
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_035571 Gene3D G3DSA:1.10.30.10 IPR009071 67 143 3.60e-34 High mobility group box domain
NP_035571 Pfam PF00505 IPR009071 68 136 2.60e-25 High mobility group box domain
NP_035571 Pfam PF12067 IPR021934 202 322 7.70e-16 Sox C-terminal transactivation domain
NP_035571 Pfam PF12067 IPR021934 327 417 1.30e-26 Sox C-terminal transactivation domain
NP_035571 ProSiteProfiles PS50118 IPR009071 68 136 0.00e-00 High mobility group box domain
NP_035571 ProSiteProfiles PS51516 IPR021934 278 418 0.00e-00 Sox C-terminal transactivation domain
NP_035571 SMART SM00398 IPR009071 67 137 5.00e-31 High mobility group box domain
NP_035571 SUPERFAMILY SSF47095 IPR009071 53 140 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_035571 PF12067 2.66247e-44 Sox_C_TAD Sox C-terminal transactivation domain
NP_035571 PF00505 1.8e-25 HMG_box HMG (high mobility group) box
NP_035571 PF09011 3.5e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_035571 GO:0006351 biological_process transcription, DNA-templated
NP_035571 GO:0006355 biological_process regulation of transcription, DNA-templated
NP_035571 GO:0007275 biological_process multicellular organismal development
NP_035571 GO:0007369 biological_process gastrulation
NP_035571 GO:0016055 biological_process Wnt signaling pathway
NP_035571 GO:0045893 biological_process positive regulation of transcription, DNA-templated
NP_035571 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
NP_035571 GO:0005634 cellular_component nucleus
NP_035571 GO:0003677 molecular_function DNA binding
NP_035571 GO:0008013 molecular_function beta-catenin binding
NP_035571 GO:0043565 molecular_function sequence-specific DNA binding