Basic Information | |||
Gene ID | 363735 ; ![]() ![]() | ||
Gene Name | Gabpa; Gabpa_predicted; rCG_58770 | ||
Full Name | GA repeat binding protein, alpha (Predicted) | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | D4ACQ9 | UniGene | Rn.145253 |
PDB | NULL | OMIM | NULL |
KEGG | rno:363735 | UCSC | RGD:1310802 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_001102311 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 292 | 419 | 4.90e-50 | Winged helix-turn-helix DNA-binding domain |
NP_001102311 | Gene3D | G3DSA:1.10.150.50 | IPR013761 | 169 | 251 | 4.10e-31 | Sterile alpha motif/pointed domain |
NP_001102311 | Pfam | PF00178 | IPR000418 | 319 | 401 | 3.10e-39 | Ets domain |
NP_001102311 | Pfam | PF02198 | IPR003118 | 171 | 250 | 2.30e-29 | Pointed domain |
NP_001102311 | Pfam | PF11620 | IPR024668 | 35 | 122 | 1.40e-41 | GA-binding protein alpha subunit, N-terminal |
NP_001102311 | PIRSF | PIRSF001703 | IPR016312 | 1 | 438 | 0.00e-00 | Transcription factor, GA-binding, alpha subunit |
NP_001102311 | PRINTS | PR00454 | IPR000418 | 320 | 333 | 1.00e-27 | Ets domain |
NP_001102311 | PRINTS | PR00454 | IPR000418 | 344 | 362 | 1.00e-27 | Ets domain |
NP_001102311 | PRINTS | PR00454 | IPR000418 | 363 | 381 | 1.00e-27 | Ets domain |
NP_001102311 | PRINTS | PR00454 | IPR000418 | 382 | 400 | 1.00e-27 | Ets domain |
NP_001102311 | ProSitePatterns | PS00345 | IPR000418 | 322 | 330 | - | Ets domain |
NP_001102311 | ProSitePatterns | PS00346 | IPR000418 | 366 | 381 | - | Ets domain |
NP_001102311 | ProSiteProfiles | PS50061 | IPR000418 | 320 | 400 | 0.00e-00 | Ets domain |
NP_001102311 | ProSiteProfiles | PS51433 | IPR003118 | 168 | 251 | 0.00e-00 | Pointed domain |
NP_001102311 | SMART | SM00251 | IPR003118 | 170 | 251 | 2.00e-42 | Pointed domain |
NP_001102311 | SMART | SM00413 | IPR000418 | 319 | 404 | 6.20e-59 | Ets domain |
NP_001102311 | SUPERFAMILY | SSF47769 | IPR013761 | 159 | 251 | 0.00e-00 | Sterile alpha motif/pointed domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_001102311 | PF11620 | 5.5001e-42 | GABP-alpha | GA-binding protein alpha chain |
NP_001102311 | PF00178 | 3.1e-39 | Ets | Ets-domain |
NP_001102311 | PF02198 | 8e-30 | SAM_PNT | Sterile alpha motif (SAM)/Pointed domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_001102311 | GO:0006351 | biological_process | transcription, DNA-templated |
NP_001102311 | GO:0005634 | cellular_component | nucleus |
NP_001102311 | GO:0003677 | molecular_function | DNA binding |
NP_001102311 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
NP_001102311 | GO:0043565 | molecular_function | sequence-specific DNA binding |